FFCP PHASE1:Hg19::chr18:56246814..56246824,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:56246814..56246824,- to FFCP PHASE1:Hg19::chr18:56246814..56246824,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=-247bp_to_AL832018_5end | |||
|cluster_id=chr18:56246814..56246824,- | |||
|coexpression_cluster_id=C2467 | |||
|description=CAGE_peak_26_at_ALPK2_5end | |||
|id=chr18:56246814..56246824,- | |||
|ontology_enrichment_celltype=CL:0002620!5.61e-14!23;CL:0000057!1.78e-13!75;CL:0000055!2.27e-11!180;CL:0000499!3.75e-09!27;CL:0000548!4.83e-07!679;CL:0000004!4.83e-07!679;CL:0000255!4.83e-07!679;CL:0000012!7.22e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.98e-19;3!CL:0000243;8.89e-13;15!CL:0000125;8.89e-13;15!CL:0000095;2.24e-11;17!CL:0000197;5.52e-10;6!CL:0000098;5.52e-10;6!CL:0002569;5.52e-10;6!CL:0002167;5.52e-10;6!CL:0000128;1.26e-08;7!CL:0000126;1.26e-08;7!CL:0000127;1.26e-08;7!CL:0002319;7.62e-08;25!CL:0002568;1.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.20e-19,3;CL:0000243,7.73e-13,15;CL:0000125,7.73e-13,15;CL:0000030,7.73e-13,15;CL:0000339,7.73e-13,15;CL:0000095,1.97e-11,17;CL:0000123,1.97e-11,17;CL:0000197,2.80e-10,6;CL:0000098,2.80e-10,6;CL:0002167,2.80e-10,6;CL:0002569,8.54e-10,6;CL:0000133,1.06e-08,59;CL:0000128,2.03e-08,7;CL:0000126,2.03e-08,7;CL:0000127,2.03e-08,7;CL:0002453,2.03e-08,7;CL:0002319,6.99e-08,25;CL:0002568,1.80e-07,1;CL:0000221,7.14e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000339;8.89e-13;15!UBERON:0000358;4.55e-08;1!UBERON:0003099;1.30e-07;1!UBERON:0003852;1.30e-07;1!CL:0000133;3.16e-07;59 | |||
|ontology_enrichment_disease=DOID:17!8.77e-08!5;DOID:450!8.77e-08!5;DOID:66!8.77e-08!5;DOID:423!8.77e-08!5;DOID:0080000!8.77e-08!5;DOID:11722!8.77e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:1192;1.28e-09;3!DOID:3093;1.09e-08;11!DOID:3369;4.55e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.13e-09,3;DOID:3093,6.46e-09,11;DOID:3369,4.28e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.63e-13!9;UBERON:0002097!3.24e-08!40;UBERON:0002199!8.91e-07!45;UBERON:0002416!8.91e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;1.48e-14;7!UBERON:0009142;1.48e-14;7!UBERON:0002331;2.09e-10;10!UBERON:0003422;5.52e-10;6!UBERON:0005705;1.30e-07;1!UBERON:0008193;1.30e-07;1!UBERON:0010912;1.30e-07;1!UBERON:0002514;1.30e-07;1!UBERON:0003457;1.30e-07;1!UBERON:0008907;1.30e-07;1!UBERON:0008001;1.30e-07;1!UBERON:0007213;1.30e-07;1!UBERON:0009891;1.30e-07;1!UBERON:0007914;1.30e-07;1!UBERON:0007375;1.30e-07;1!UBERON:0003323;1.30e-07;1!UBERON:0010258;1.30e-07;1!UBERON:0005253;1.30e-07;1!UBERON:0007842;1.30e-07;1!UBERON:0002397;1.30e-07;1!UBERON:0003113;1.30e-07;1!UBERON:0003277;1.30e-07;1!UBERON:0001709;1.30e-07;1!UBERON:0002244;1.30e-07;1!UBERON:0005620;1.30e-07;1!UBERON:0010364;1.30e-07;1!UBERON:0004288;1.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.04e-10,10;UBERON:0000358,3.04e-10,10;UBERON:0000307,3.04e-10,10;UBERON:0000091,3.04e-10,10;UBERON:0000087,3.04e-10,10;UBERON:0007010,3.04e-10,10;UBERON:0007806,3.04e-10,10;UBERON:0008780,3.04e-10,10;UBERON:0005728,3.04e-10,10;UBERON:0003422,8.54e-10,6;UBERON:0005705,8.84e-08,1;UBERON:0008193,8.84e-08,1;UBERON:0010912,8.84e-08,1;UBERON:0002514,8.84e-08,1;UBERON:0003457,8.84e-08,1;UBERON:0008907,8.84e-08,1;UBERON:0008001,8.84e-08,1;UBERON:0007213,8.84e-08,1;UBERON:0009891,8.84e-08,1;UBERON:0007914,8.84e-08,1;UBERON:0009292,8.84e-08,1;UBERON:0003099,8.84e-08,1;UBERON:0007375,8.84e-08,1;UBERON:0003323,8.84e-08,1;UBERON:0010258,8.84e-08,1;UBERON:0007842,8.84e-08,1;UBERON:0009494,8.84e-08,1;UBERON:0010042,8.84e-08,1;UBERON:0010045,8.84e-08,1;UBERON:0010259,8.84e-08,1;UBERON:0010359,8.84e-08,1;UBERON:0009526,8.84e-08,1;UBERON:0002397,8.84e-08,1;UBERON:0003113,8.84e-08,1;UBERON:0003277,8.84e-08,1;UBERON:0001709,8.84e-08,1;UBERON:0004066,8.84e-08,1;UBERON:0002244,8.84e-08,1;UBERON:0005620,8.84e-08,1;UBERON:0004362,8.84e-08,1;UBERON:0010364,8.84e-08,1;UBERON:0010046,8.84e-08,1;UBERON:0005868,8.84e-08,1;UBERON:0007238,8.84e-08,1;UBERON:0004288,8.84e-08,1;UBERON:0004068,8.84e-08,1;UBERON:0010334,8.84e-08,1;UBERON:0003852,8.84e-08,1;UBERON:0010253,8.84e-08,1 | |||
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| ||
|short_description=p26@ALPK2 | |||
}} | }} |
Latest revision as of 00:07, 20 September 2015
Short description: | p26@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_ALPK2_5end |
Coexpression cluster: | C2467_Olfactory_Fibroblast_Hair_alveolar_glioblastoma_Preadipocyte_Ewing |
Association with transcript: | -247bp_to_AL832018_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.20e-19 | 3 |
glial cell (sensu Vertebrata) | 7.73e-13 | 15 |
glial cell | 7.73e-13 | 15 |
glioblast | 7.73e-13 | 15 |
glioblast (sensu Vertebrata) | 7.73e-13 | 15 |
neuron associated cell | 1.97e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.97e-11 | 17 |
receptor cell | 2.80e-10 | 6 |
sensory epithelial cell | 2.80e-10 | 6 |
olfactory epithelial cell | 2.80e-10 | 6 |
mesenchymal stem cell of umbilical cord | 8.54e-10 | 6 |
neurectodermal cell | 1.06e-08 | 59 |
oligodendrocyte | 2.03e-08 | 7 |
macroglial cell | 2.03e-08 | 7 |
astrocyte | 2.03e-08 | 7 |
oligodendrocyte precursor cell | 2.03e-08 | 7 |
neural cell | 6.99e-08 | 25 |
mesenchymal stem cell of Wharton's jelly | 1.80e-07 | 1 |
ectodermal cell | 7.14e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.13e-09 | 3 |
nervous system cancer | 6.46e-09 | 11 |
peripheral primitive neuroectodermal tumor | 4.28e-08 | 1 |