FFCP PHASE1:Hg19::chr14:39644425..39644470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5411 | |EntrezGene=5411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9162 | |HGNC=9162 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5F0 | |UniProt=G3V5F0 | ||
|association_with_transcript=0bp_to_ENST00000556530_5end | |association_with_transcript=0bp_to_ENST00000556530_5end | ||
|cluster_id=chr14:39644425..39644470,+ | |||
|coexpression_cluster_id=C1724 | |||
|description=CAGE_peak_1_at_PNN_5end | |description=CAGE_peak_1_at_PNN_5end | ||
|id=chr14:39644425..39644470,+ | |id=chr14:39644425..39644470,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.99e-23!172;CL:0000566!1.99e-23!172;CL:0000988!1.19e-20!182;CL:0002032!1.95e-20!165;CL:0000837!1.95e-20!165;CL:0000542!4.22e-14!53;CL:0000051!4.22e-14!53;CL:0000838!9.35e-14!52;CL:0000738!2.03e-13!140;CL:0002031!3.36e-11!124;CL:0002087!1.54e-10!119;CL:0000945!1.59e-08!24;CL:0000826!1.59e-08!24;CL:0000763!2.56e-08!112;CL:0000049!2.56e-08!112 | |ontology_enrichment_celltype=CL:0000037!1.99e-23!172;CL:0000566!1.99e-23!172;CL:0000988!1.19e-20!182;CL:0002032!1.95e-20!165;CL:0000837!1.95e-20!165;CL:0000542!4.22e-14!53;CL:0000051!4.22e-14!53;CL:0000838!9.35e-14!52;CL:0000738!2.03e-13!140;CL:0002031!3.36e-11!124;CL:0002087!1.54e-10!119;CL:0000945!1.59e-08!24;CL:0000826!1.59e-08!24;CL:0000763!2.56e-08!112;CL:0000049!2.56e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.52e-08;24!CL:0000542;1.78e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.21e-22,168;CL:0000988,3.09e-20,177;CL:0002032,1.94e-19,161;CL:0000837,1.94e-19,161;CL:0000542,4.22e-14,53;CL:0000051,4.22e-14,53;CL:0000838,9.35e-14,52;CL:0000738,1.50e-12,136;CL:0002031,2.24e-10,120;CL:0002087,9.97e-10,115;CL:0000945,1.59e-08,24;CL:0000826,1.59e-08,24;CL:0000763,1.41e-07,108;CL:0000049,1.41e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;1.78e-08;53 | |||
|ontology_enrichment_disease=DOID:162!2.86e-30!235;DOID:14566!1.50e-28!239;DOID:0050687!6.63e-18!143;DOID:0050686!2.30e-17!137;DOID:305!2.00e-15!106;DOID:2531!5.29e-14!51;DOID:0060083!5.29e-14!51;DOID:1240!1.36e-12!39;DOID:8692!1.12e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.28e-10;31!DOID:1240;4.25e-10;39!DOID:2531;3.35e-09;51!DOID:0060083;3.35e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.86e-30,235;DOID:14566,1.50e-28,239;DOID:0050687,6.63e-18,143;DOID:0050686,2.30e-17,137;DOID:305,2.00e-15,106;DOID:2531,5.29e-14,51;DOID:0060083,5.29e-14,51;DOID:1240,1.36e-12,39;DOID:8692,1.12e-10,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@PNN | |short_description=p1@PNN | ||
}} | }} |
Latest revision as of 00:06, 20 September 2015
Short description: | p1@PNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNN_5end |
Coexpression cluster: | C1724_Mast_medulloblastoma_small_non_cerebellum_hepatoblastoma_merkel |
Association with transcript: | 0bp_to_ENST00000556530_5end |
EntrezGene: | PNN |
HGNC: | 9162 |
UniProt: | G3V5F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.21e-22 | 168 |
hematopoietic cell | 3.09e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.94e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-19 | 161 |
lymphocyte | 4.22e-14 | 53 |
common lymphoid progenitor | 4.22e-14 | 53 |
lymphoid lineage restricted progenitor cell | 9.35e-14 | 52 |
leukocyte | 1.50e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 2.24e-10 | 120 |
nongranular leukocyte | 9.97e-10 | 115 |
lymphocyte of B lineage | 1.59e-08 | 24 |
pro-B cell | 1.59e-08 | 24 |
myeloid cell | 1.41e-07 | 108 |
common myeloid progenitor | 1.41e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.86e-30 | 235 |
disease of cellular proliferation | 1.50e-28 | 239 |
cell type cancer | 6.63e-18 | 143 |
organ system cancer | 2.30e-17 | 137 |
carcinoma | 2.00e-15 | 106 |
hematologic cancer | 5.29e-14 | 51 |
immune system cancer | 5.29e-14 | 51 |
leukemia | 1.36e-12 | 39 |
myeloid leukemia | 1.12e-10 | 31 |