FFCP PHASE1:Hg19::chr15:93632421..93632446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56963 | |EntrezGene=56963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30308 | |HGNC=30308 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B86 | |UniProt=Q96B86 | ||
|association_with_transcript=0bp_to_ENST00000329082,NM_020211,uc002bss.1_5end | |association_with_transcript=0bp_to_ENST00000329082,NM_020211,uc002bss.1_5end | ||
|cluster_id=chr15:93632421..93632446,- | |||
|coexpression_cluster_id=C702 | |coexpression_cluster_id=C702 | ||
|description=CAGE_peak_1_at_RGMA_5end | |description=CAGE_peak_1_at_RGMA_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.68e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.22e-13;82!UBERON:0002532;1.66e-07;206!UBERON:0010316;1.66e-07;206 | |ontology_enrichment_development_v019=UBERON:0006601;2.22e-13;82!UBERON:0002532;1.66e-07;206!UBERON:0010316;1.66e-07;206 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.52e-57!115;UBERON:0005743!3.90e-43!86;UBERON:0001017!3.43e-42!82;UBERON:0001049!4.55e-42!57;UBERON:0005068!4.55e-42!57;UBERON:0006241!4.55e-42!57;UBERON:0007135!4.55e-42!57;UBERON:0000073!1.65e-39!94;UBERON:0001016!1.65e-39!94;UBERON:0003075!1.38e-37!86;UBERON:0007284!1.38e-37!86;UBERON:0002346!2.26e-36!90;UBERON:0002616!5.48e-36!59;UBERON:0000955!5.55e-33!69;UBERON:0006238!5.55e-33!69;UBERON:0003080!6.23e-31!42;UBERON:0002780!2.46e-30!41;UBERON:0001890!2.46e-30!41;UBERON:0006240!2.46e-30!41;UBERON:0000153!2.70e-28!129;UBERON:0007811!2.70e-28!129;UBERON:0004121!3.64e-28!169;UBERON:0002020!6.37e-28!34;UBERON:0003528!6.37e-28!34;UBERON:0000924!7.84e-28!173;UBERON:0006601!7.84e-28!173;UBERON:0001893!9.81e-28!34;UBERON:0000033!2.54e-27!123;UBERON:0002791!5.41e-27!33;UBERON:0001869!4.85e-26!32;UBERON:0003056!1.16e-25!61;UBERON:0000956!1.90e-20!25;UBERON:0000203!1.90e-20!25;UBERON:0002619!8.91e-19!22;UBERON:0001950!3.30e-17!20;UBERON:0000922!1.29e-12!612;UBERON:0000468!1.29e-12!659;UBERON:0000062!1.63e-12!511;UBERON:0003076!5.37e-12!15;UBERON:0003057!5.37e-12!15;UBERON:0000064!5.61e-12!219;UBERON:0002050!3.20e-10!605;UBERON:0005423!3.20e-10!605;UBERON:0000467!5.49e-10!625;UBERON:0000923!7.20e-10!604;UBERON:0005291!7.20e-10!604;UBERON:0006598!7.20e-10!604;UBERON:0002532!7.20e-10!604;UBERON:0004732!7.25e-10!13;UBERON:0000480!7.41e-10!626;UBERON:0004733!2.37e-09!12;UBERON:0002028!2.37e-09!12;UBERON:0007277!2.37e-09!12;UBERON:0000475!3.14e-09!365;UBERON:0002308!6.63e-09!9;UBERON:0000125!6.63e-09!9;UBERON:0002420!1.20e-08!9;UBERON:0007245!1.20e-08!9;UBERON:0010009!1.20e-08!9;UBERON:0010011!1.20e-08!9;UBERON:0000454!1.20e-08!9;UBERON:0002298!5.07e-08!8;UBERON:0001871!1.93e-07!7;UBERON:0000481!2.00e-07!347;UBERON:0009663!3.72e-07!7;UBERON:0002680!8.15e-07!9;UBERON:0001895!8.15e-07!9;UBERON:0010092!8.15e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!7.52e-57!115;UBERON:0005743!3.90e-43!86;UBERON:0001017!3.43e-42!82;UBERON:0001049!4.55e-42!57;UBERON:0005068!4.55e-42!57;UBERON:0006241!4.55e-42!57;UBERON:0007135!4.55e-42!57;UBERON:0000073!1.65e-39!94;UBERON:0001016!1.65e-39!94;UBERON:0003075!1.38e-37!86;UBERON:0007284!1.38e-37!86;UBERON:0002346!2.26e-36!90;UBERON:0002616!5.48e-36!59;UBERON:0000955!5.55e-33!69;UBERON:0006238!5.55e-33!69;UBERON:0003080!6.23e-31!42;UBERON:0002780!2.46e-30!41;UBERON:0001890!2.46e-30!41;UBERON:0006240!2.46e-30!41;UBERON:0000153!2.70e-28!129;UBERON:0007811!2.70e-28!129;UBERON:0004121!3.64e-28!169;UBERON:0002020!6.37e-28!34;UBERON:0003528!6.37e-28!34;UBERON:0000924!7.84e-28!173;UBERON:0006601!7.84e-28!173;UBERON:0001893!9.81e-28!34;UBERON:0000033!2.54e-27!123;UBERON:0002791!5.41e-27!33;UBERON:0001869!4.85e-26!32;UBERON:0003056!1.16e-25!61;UBERON:0000956!1.90e-20!25;UBERON:0000203!1.90e-20!25;UBERON:0002619!8.91e-19!22;UBERON:0001950!3.30e-17!20;UBERON:0000922!1.29e-12!612;UBERON:0000468!1.29e-12!659;UBERON:0000062!1.63e-12!511;UBERON:0003076!5.37e-12!15;UBERON:0003057!5.37e-12!15;UBERON:0000064!5.61e-12!219;UBERON:0002050!3.20e-10!605;UBERON:0005423!3.20e-10!605;UBERON:0000467!5.49e-10!625;UBERON:0000923!7.20e-10!604;UBERON:0005291!7.20e-10!604;UBERON:0006598!7.20e-10!604;UBERON:0002532!7.20e-10!604;UBERON:0004732!7.25e-10!13;UBERON:0000480!7.41e-10!626;UBERON:0004733!2.37e-09!12;UBERON:0002028!2.37e-09!12;UBERON:0007277!2.37e-09!12;UBERON:0000475!3.14e-09!365;UBERON:0002308!6.63e-09!9;UBERON:0000125!6.63e-09!9;UBERON:0002420!1.20e-08!9;UBERON:0007245!1.20e-08!9;UBERON:0010009!1.20e-08!9;UBERON:0010011!1.20e-08!9;UBERON:0000454!1.20e-08!9;UBERON:0002298!5.07e-08!8;UBERON:0001871!1.93e-07!7;UBERON:0000481!2.00e-07!347;UBERON:0009663!3.72e-07!7;UBERON:0002680!8.15e-07!9;UBERON:0001895!8.15e-07!9;UBERON:0010092!8.15e-07!9 | ||
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| ||
|short_description=p1@RGMA | |short_description=p1@RGMA | ||
}} | }} |
Latest revision as of 23:51, 19 September 2015
Short description: | p1@RGMA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGMA_5end |
Coexpression cluster: | C702_spinal_parietal_Neural_occipital_locus_temporal_globus |
Association with transcript: | 0bp_to_ENST00000329082, NM_020211, uc002bss.1_5end |
EntrezGene: | RGMA |
HGNC: | 30308 |
UniProt: | Q96B86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.68e-08 | 8 |