FFCP PHASE1:Hg19::chr17:38179639..38179652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9862 | |EntrezGene=9862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22963 | |HGNC=22963 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010wer.1_5end | |association_with_transcript=0bp_to_uc010wer.1_5end | ||
|cluster_id=chr17:38179639..38179652,- | |||
|coexpression_cluster_id=C1399 | |||
|description=CAGE_peak_7_at_MED24_5end | |description=CAGE_peak_7_at_MED24_5end | ||
|id=chr17:38179639..38179652,- | |id=chr17:38179639..38179652,- | ||
|ontology_enrichment_celltype=CL:0002368!7.45e-13!13;CL:0002202!3.62e-09!9;CL:0002632!3.62e-09!9;CL:0000068!5.47e-08!3;CL:0000069!5.47e-08!3;CL:0000307!5.47e-08!3;CL:0000377!5.47e-08!3;CL:0002328!5.59e-08!3;CL:0002076!1.29e-07!43 | |ontology_enrichment_celltype=CL:0002368!7.45e-13!13;CL:0002202!3.62e-09!9;CL:0002632!3.62e-09!9;CL:0000068!5.47e-08!3;CL:0000069!5.47e-08!3;CL:0000307!5.47e-08!3;CL:0000377!5.47e-08!3;CL:0002328!5.59e-08!3;CL:0002076!1.29e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002202;2.62e-47;9!CL:0002632;2.62e-47;9!CL:0000307;1.85e-36;3!CL:0002328;2.35e-36;3!CL:0002368;1.05e-32;13!CL:0002138;5.62e-18;6!CL:0000622;3.76e-10;5!CL:0000154;1.31e-08;6!CL:0002076;1.92e-08;42!CL:0000317;4.69e-07;2!CL:1000448;4.69e-07;2!CL:0002308;4.69e-07;2!CL:0000575;4.69e-07;2!CL:0002140;4.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.84e-47,9;CL:0002632,2.84e-47,9;CL:0000068,2.08e-36,3;CL:0000069,2.08e-36,3;CL:0000307,2.08e-36,3;CL:0000377,2.08e-36,3;CL:0002328,2.35e-36,3;CL:0002368,1.11e-32,13;CL:0005020,4.45e-18,6;CL:0002138,4.45e-18,6;CL:0005022,4.45e-18,6;CL:0002076,3.09e-13,42;CL:0000622,4.32e-10,5;CL:0000223,2.06e-09,58;CL:0000154,1.47e-08,6;CL:0000066,3.18e-07,253;CL:0000317,4.69e-07,2;CL:1000448,4.69e-07,2;CL:0002308,4.69e-07,2;CL:0002140,4.69e-07,2;CL:0000575,5.28e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.85e-36;3!CL:0005022;5.62e-18;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.67e-11!72;UBERON:0007196!1.45e-09!14;UBERON:0001558!1.45e-09!14;UBERON:0000065!1.74e-09!53;UBERON:0004119!5.17e-09!169;UBERON:0000925!5.17e-09!169;UBERON:0006595!5.17e-09!169;UBERON:0003126!2.77e-08!7;UBERON:0001005!2.77e-08!7;UBERON:0004921!3.01e-08!129;UBERON:0004185!3.01e-08!129;UBERON:0005178!4.45e-08!34;UBERON:0002224!4.45e-08!34;UBERON:0004815!5.59e-08!3;UBERON:0002031!5.59e-08!3;UBERON:0001007!7.56e-08!155;UBERON:0001555!7.56e-08!155;UBERON:0007026!7.56e-08!155;UBERON:0005181!9.39e-08!35;UBERON:0005157!1.21e-07!51;UBERON:0000077!5.25e-07!130;UBERON:0008947!6.88e-07!38;UBERON:0003258!6.88e-07!38;UBERON:0005153!7.49e-07!37;UBERON:0000464!8.06e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.35e-36;3!UBERON:0002031;2.35e-36;3!UBERON:0007196;2.56e-28;15!UBERON:0001558;2.56e-28;15!UBERON:0002185;4.12e-22;5!UBERON:0005178;3.60e-16;34!UBERON:0002224;3.60e-16;34!UBERON:0003126;5.01e-16;7!UBERON:0001005;5.01e-16;7!UBERON:0000485;5.55e-16;7!UBERON:0001473;1.21e-13;8!UBERON:0004536;1.21e-13;8!UBERON:0006558;1.21e-13;8!UBERON:0005181;2.97e-13;35!UBERON:0002465;4.95e-11;10!UBERON:0000072;9.99e-11;37!UBERON:0000065;4.08e-10;44!UBERON:0002048;6.69e-09;22!UBERON:0000117;6.69e-09;22!UBERON:0000171;6.69e-09;22!UBERON:0000170;6.69e-09;22!UBERON:0000915;3.91e-07;52!UBERON:0002419;4.69e-07;2!UBERON:0007771;4.69e-07;2!UBERON:0003297;4.69e-07;2!UBERON:0001821;4.69e-07;2!UBERON:0003487;4.69e-07;2!UBERON:0001820;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.35e-36,3;UBERON:0002031,2.35e-36,3;UBERON:0007196,2.68e-28,15;UBERON:0001558,2.68e-28,15;UBERON:0002185,4.12e-22,5;UBERON:0005178,1.43e-16,34;UBERON:0002224,1.43e-16,34;UBERON:0005181,4.42e-16,35;UBERON:0003126,5.27e-16,7;UBERON:0001005,5.27e-16,7;UBERON:0008947,9.14e-15,38;UBERON:0003258,9.14e-15,38;UBERON:0001473,1.02e-13,8;UBERON:0004536,1.02e-13,8;UBERON:0006558,1.02e-13,8;UBERON:0000485,1.45e-12,9;UBERON:0002465,4.31e-11,10;UBERON:0000915,1.26e-10,52;UBERON:0000065,3.30e-10,54;UBERON:0001041,6.34e-10,87;UBERON:0001004,2.17e-09,74;UBERON:0002048,6.62e-09,22;UBERON:0000117,6.62e-09,22;UBERON:0000171,6.62e-09,22;UBERON:0000170,6.62e-09,22;UBERON:0005597,6.62e-09,22;UBERON:0000118,6.62e-09,22;UBERON:0000072,8.29e-09,47;UBERON:0002419,4.69e-07,2;UBERON:0007771,4.69e-07,2;UBERON:0003297,4.69e-07,2;UBERON:0001821,4.69e-07,2;UBERON:0003487,4.69e-07,2;UBERON:0001820,4.69e-07,2;UBERON:0005089,4.69e-07,2;UBERON:0005088,4.69e-07,2;UBERON:0004921,5.92e-07,118 | |||
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| ||
|short_description=p7@MED24 | |short_description=p7@MED24 | ||
}} | }} |
Latest revision as of 23:42, 19 September 2015
Short description: | p7@MED24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MED24_5end |
Coexpression cluster: | C1399_Bronchial_Tracheal_bronchial_Lymphatic_salivary_Small_lung |
Association with transcript: | 0bp_to_uc010wer.1_5end |
EntrezGene: | MED24 |
HGNC: | 22963 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.84e-47 | 9 |
epithelial cell of lower respiratory tract | 2.84e-47 | 9 |
duct epithelial cell | 2.08e-36 | 3 |
branched duct epithelial cell | 2.08e-36 | 3 |
tracheal epithelial cell | 2.08e-36 | 3 |
tracheoblast | 2.08e-36 | 3 |
bronchial epithelial cell | 2.35e-36 | 3 |
respiratory epithelial cell | 1.11e-32 | 13 |
lymphangioblast | 4.45e-18 | 6 |
endothelial cell of lymphatic vessel | 4.45e-18 | 6 |
vascular lymphangioblast | 4.45e-18 | 6 |
endo-epithelial cell | 3.09e-13 | 42 |
acinar cell | 4.32e-10 | 5 |
endodermal cell | 2.06e-09 | 58 |
protein secreting cell | 1.47e-08 | 6 |
epithelial cell | 3.18e-07 | 253 |
sebum secreting cell | 4.69e-07 | 2 |
epithelial cell of sweat gland | 4.69e-07 | 2 |
epithelial cell of skin gland | 4.69e-07 | 2 |
acinar cell of sebaceous gland | 4.69e-07 | 2 |
corneal epithelial cell | 5.28e-07 | 2 |