FFCP PHASE1:Hg19::chr6:83073511..83073522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7162 | |EntrezGene=7162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12004 | |HGNC=12004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=148bp_to_uc010kbj.2_5end | |association_with_transcript=148bp_to_uc010kbj.2_5end | ||
|cluster_id=chr6:83073511..83073522,+ | |||
|coexpression_cluster_id=C1089 | |||
|description=CAGE_peak_6_at_TPBG_5end | |description=CAGE_peak_6_at_TPBG_5end | ||
|id=chr6:83073511..83073522,+ | |id=chr6:83073511..83073522,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.57e-16!180;CL:0000057!8.50e-11!75;CL:0002321!9.76e-11!248;CL:0000220!2.65e-10!246;CL:0000680!1.49e-09!57;CL:0000056!1.49e-09!57;CL:0000355!1.49e-09!57;CL:0000187!5.94e-09!54;CL:0000183!6.88e-09!59;CL:0000192!9.90e-09!42;CL:0000514!9.90e-09!42;CL:0000393!3.27e-08!60;CL:0000211!3.27e-08!60;CL:0000359!2.13e-07!32;CL:0000066!2.71e-07!254;CL:0002620!3.05e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.57e-16!180;CL:0000057!8.50e-11!75;CL:0002321!9.76e-11!248;CL:0000220!2.65e-10!246;CL:0000680!1.49e-09!57;CL:0000056!1.49e-09!57;CL:0000355!1.49e-09!57;CL:0000187!5.94e-09!54;CL:0000183!6.88e-09!59;CL:0000192!9.90e-09!42;CL:0000514!9.90e-09!42;CL:0000393!3.27e-08!60;CL:0000211!3.27e-08!60;CL:0000359!2.13e-07!32;CL:0000066!2.71e-07!254;CL:0002620!3.05e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.49e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.80e-09,250;CL:0000057,2.37e-09,76;CL:0000680,2.34e-07,58;CL:0000056,2.34e-07,58;CL:0000355,2.34e-07,58;CL:0002620,9.62e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.55e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.17e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.07e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.31e-15!365;UBERON:0003102!3.44e-15!95;UBERON:0002100!1.18e-13!216;UBERON:0000468!1.89e-13!659;UBERON:0000486!2.75e-13!82;UBERON:0000914!4.31e-12!83;UBERON:0002329!4.31e-12!83;UBERON:0003077!4.31e-12!83;UBERON:0003059!4.31e-12!83;UBERON:0007282!4.31e-12!83;UBERON:0009618!4.31e-12!83;UBERON:0007285!4.31e-12!83;UBERON:0000481!2.69e-11!347;UBERON:0005256!3.17e-11!143;UBERON:0003104!4.49e-11!238;UBERON:0009142!4.49e-11!238;UBERON:0004290!6.92e-11!70;UBERON:0002385!8.94e-09!63;UBERON:0001015!8.94e-09!63;UBERON:0000383!8.94e-09!63;UBERON:0001134!1.30e-08!61;UBERON:0002036!1.30e-08!61;UBERON:0003082!1.30e-08!61;UBERON:0000467!1.38e-08!625;UBERON:0000480!1.39e-08!626;UBERON:0002097!1.78e-08!40;UBERON:0000119!3.88e-08!312;UBERON:0002199!6.80e-08!45;UBERON:0002416!6.80e-08!45;UBERON:0000483!7.63e-08!309;UBERON:0000922!1.11e-07!612;UBERON:0005156!3.30e-07!59;UBERON:0000990!3.30e-07!59;UBERON:0004923!4.96e-07!57;UBERON:0004119!5.27e-07!169;UBERON:0000925!5.27e-07!169;UBERON:0006595!5.27e-07!169;UBERON:0004573!6.20e-07!33;UBERON:0004571!6.20e-07!33;UBERON:0001637!6.62e-07!42;UBERON:0003509!6.62e-07!42;UBERON:0004572!6.62e-07!42;UBERON:0000464!7.82e-07!104 | |ontology_enrichment_uberon=UBERON:0000475!1.31e-15!365;UBERON:0003102!3.44e-15!95;UBERON:0002100!1.18e-13!216;UBERON:0000468!1.89e-13!659;UBERON:0000486!2.75e-13!82;UBERON:0000914!4.31e-12!83;UBERON:0002329!4.31e-12!83;UBERON:0003077!4.31e-12!83;UBERON:0003059!4.31e-12!83;UBERON:0007282!4.31e-12!83;UBERON:0009618!4.31e-12!83;UBERON:0007285!4.31e-12!83;UBERON:0000481!2.69e-11!347;UBERON:0005256!3.17e-11!143;UBERON:0003104!4.49e-11!238;UBERON:0009142!4.49e-11!238;UBERON:0004290!6.92e-11!70;UBERON:0002385!8.94e-09!63;UBERON:0001015!8.94e-09!63;UBERON:0000383!8.94e-09!63;UBERON:0001134!1.30e-08!61;UBERON:0002036!1.30e-08!61;UBERON:0003082!1.30e-08!61;UBERON:0000467!1.38e-08!625;UBERON:0000480!1.39e-08!626;UBERON:0002097!1.78e-08!40;UBERON:0000119!3.88e-08!312;UBERON:0002199!6.80e-08!45;UBERON:0002416!6.80e-08!45;UBERON:0000483!7.63e-08!309;UBERON:0000922!1.11e-07!612;UBERON:0005156!3.30e-07!59;UBERON:0000990!3.30e-07!59;UBERON:0004923!4.96e-07!57;UBERON:0004119!5.27e-07!169;UBERON:0000925!5.27e-07!169;UBERON:0006595!5.27e-07!169;UBERON:0004573!6.20e-07!33;UBERON:0004571!6.20e-07!33;UBERON:0001637!6.62e-07!42;UBERON:0003509!6.62e-07!42;UBERON:0004572!6.62e-07!42;UBERON:0000464!7.82e-07!104 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p6@TPBG | |short_description=p6@TPBG | ||
}} | }} |
Latest revision as of 23:32, 19 September 2015
Short description: | p6@TPBG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TPBG_5end |
Coexpression cluster: | C1089_Smooth_Small_Fibroblast_Prostate_anaplastic_mesenchymal_nasal |
Association with transcript: | 148bp_to_uc010kbj.2_5end |
EntrezGene: | TPBG |
HGNC: | 12004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.80e-09 | 250 |
fibroblast | 2.37e-09 | 76 |
muscle precursor cell | 2.34e-07 | 58 |
myoblast | 2.34e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-07 | 58 |
skin fibroblast | 9.62e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.77e-12 | 99 |
multilaminar epithelium | 8.73e-11 | 83 |
somite | 9.08e-09 | 71 |
presomitic mesoderm | 9.08e-09 | 71 |
presumptive segmental plate | 9.08e-09 | 71 |
dermomyotome | 9.08e-09 | 71 |
trunk paraxial mesoderm | 9.08e-09 | 71 |
dense mesenchyme tissue | 9.10e-09 | 73 |
paraxial mesoderm | 1.77e-08 | 72 |
presumptive paraxial mesoderm | 1.77e-08 | 72 |
skin of body | 7.83e-08 | 41 |
female organism | 9.93e-08 | 41 |
integument | 1.92e-07 | 46 |
integumental system | 1.92e-07 | 46 |
female reproductive organ | 2.38e-07 | 37 |
female reproductive system | 2.38e-07 | 37 |
reproductive structure | 2.55e-07 | 59 |
reproductive system | 2.55e-07 | 59 |
trunk | 5.83e-07 | 199 |
epithelial vesicle | 6.23e-07 | 78 |
muscle tissue | 9.09e-07 | 64 |
musculature | 9.09e-07 | 64 |
musculature of body | 9.09e-07 | 64 |
skeletal muscle tissue | 9.72e-07 | 62 |
striated muscle tissue | 9.72e-07 | 62 |
myotome | 9.72e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.07e-11 | 14 |