FFCP PHASE1:Hg19::chrX:152486124..152486143,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4100 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6796 | |||
|TSSclassifier=strong | |||
|UniProt=P43355 | |||
|association_with_transcript=-8bp_to_NM_004988,uc004fhf.2_5end | |||
|cluster_id=chrX:152486124..152486143,- | |||
|coexpression_cluster_id=C4858 | |||
|description=CAGE_peak_3_at_MAGEA1_5end | |||
|id=chrX:152486124..152486143,- | |||
|ontology_enrichment_celltype=CL:0000054!2.74e-09!2;CL:0000137!2.74e-09!2;CL:0000092!2.74e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.64e-07,11;CL:0000375,1.64e-07,11;CL:0000335,1.64e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.64e-07;11 | |||
|ontology_enrichment_disease=DOID:162!9.96e-21!235;DOID:14566!4.18e-20!239;DOID:1036!7.56e-13!8;DOID:0050687!2.55e-12!143;DOID:0050686!5.33e-10!137;DOID:305!7.15e-10!106;DOID:200!2.74e-09!2;DOID:4305!2.74e-09!2;DOID:2531!5.16e-09!51;DOID:0060083!5.16e-09!51;DOID:3905!1.54e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.75e-17;8!DOID:0060085;4.46e-10;1!DOID:3165;4.46e-10;1!DOID:0060121;4.46e-10;1!DOID:2438;4.46e-10;1!DOID:4418;4.46e-10;1!DOID:4960;1.55e-09;1!DOID:0070004;1.55e-09;1!DOID:2531;7.03e-07;51!DOID:0060083;7.03e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.46e-17,8;DOID:0060085,4.46e-10,1;DOID:3165,4.46e-10,1;DOID:0060121,4.46e-10,1;DOID:2438,4.46e-10,1;DOID:4418,4.46e-10,1;DOID:4960,1.48e-09,1;DOID:0070004,1.48e-09,1;DOID:162,1.57e-09,235;DOID:2531,1.88e-09,51;DOID:0060083,1.88e-09,51;DOID:0050686,2.11e-09,137;DOID:14566,2.91e-09,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.09e-07;18 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8531816353722,4.45551299571175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,4.30423242938906,0,0,3.90051844971174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,2.72346158797475,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0.332423363800313,3.60953056987489,4.50943828930801,5.20246919625112,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0,0,0,0,0,0,0,0,6.65638430463066,0,0,0,0,0,0,0,0,0,0,0,7.40026393092455,8.54472830322856,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5779530206378,0,0,0,0,0,0,0,0,4.92555124496034,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,5.73073732504038,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,6.85116800507922,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,2.75543967457305,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659643100472575,13.7376187645673,0,0,0,0,0,0,0,0,0,0,0,1.89888196257365,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,1.33982065078089,0,0,0,0,0,0,1.90624166387043,0,0,0,0,0,0.358611026963382,0,0.0814032686109745,3.52200241396461,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MAGEA1 | |||
}} |
Latest revision as of 23:21, 19 September 2015
Short description: | p3@MAGEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAGEA1_5end |
Coexpression cluster: | C4858_small_large_melanoma_lymphangiectasia_Saos2_endometrial_fibrous |
Association with transcript: | -8bp_to_NM_004988, uc004fhf.2_5end |
EntrezGene: | MAGEA1 |
HGNC: | 6796 |
UniProt: | P43355 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.64e-07 | 11 |
osteoprogenitor cell | 1.64e-07 | 11 |
mesenchyme condensation cell | 1.64e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.46e-17 | 8 |
organ system benign neoplasm | 4.46e-10 | 1 |
skin benign neoplasm | 4.46e-10 | 1 |
integumentary system benign neoplasm | 4.46e-10 | 1 |
dermis tumor | 4.46e-10 | 1 |
cutaneous fibrous histiocytoma | 4.46e-10 | 1 |
bone marrow cancer | 1.48e-09 | 1 |
myeloma | 1.48e-09 | 1 |
cancer | 1.57e-09 | 235 |
hematologic cancer | 1.88e-09 | 51 |
immune system cancer | 1.88e-09 | 51 |
organ system cancer | 2.11e-09 | 137 |
disease of cellular proliferation | 2.91e-09 | 239 |