FFCP PHASE1:Hg19::chr6:82462435..82462450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55603 | |EntrezGene=55603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18345 | |HGNC=18345 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IP4 | |UniProt=Q96IP4 | ||
|association_with_transcript=-7bp_to_NM_017633,uc003pjg.2_5end | |association_with_transcript=-7bp_to_NM_017633,uc003pjg.2_5end | ||
|cluster_id=chr6:82462435..82462450,- | |||
|description=CAGE_peak_4_at_FAM46A_5end | |description=CAGE_peak_4_at_FAM46A_5end | ||
|id=chr6:82462435..82462450,- | |id=chr6:82462435..82462450,- | ||
|ontology_enrichment_celltype=CL:0000839!2.19e-13!70;CL:0000557!3.26e-13!71;CL:0000766!8.60e-13!76;CL:0002009!1.76e-11!65;CL:0002194!3.19e-11!63;CL:0000576!3.19e-11!63;CL:0000040!3.19e-11!63;CL:0000559!3.19e-11!63;CL:0000763!5.15e-10!112;CL:0000049!5.15e-10!112;CL:0000738!2.85e-09!140;CL:0002031!7.24e-09!124;CL:0000860!2.23e-08!45;CL:0000037!7.04e-08!172;CL:0000566!7.04e-08!172;CL:0002087!2.64e-07!119;CL:0002032!2.68e-07!165;CL:0000837!2.68e-07!165;CL:0002057!4.51e-07!42 | |ontology_enrichment_celltype=CL:0000839!2.19e-13!70;CL:0000557!3.26e-13!71;CL:0000766!8.60e-13!76;CL:0002009!1.76e-11!65;CL:0002194!3.19e-11!63;CL:0000576!3.19e-11!63;CL:0000040!3.19e-11!63;CL:0000559!3.19e-11!63;CL:0000763!5.15e-10!112;CL:0000049!5.15e-10!112;CL:0000738!2.85e-09!140;CL:0002031!7.24e-09!124;CL:0000860!2.23e-08!45;CL:0000037!7.04e-08!172;CL:0000566!7.04e-08!172;CL:0002087!2.64e-07!119;CL:0002032!2.68e-07!165;CL:0000837!2.68e-07!165;CL:0002057!4.51e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.47e-12,72;CL:0000839,1.09e-11,66;CL:0000557,2.14e-11,67;CL:0002194,2.92e-09,59;CL:0000576,2.92e-09,59;CL:0000040,2.92e-09,59;CL:0000559,2.92e-09,59;CL:0000738,6.69e-09,136;CL:0002009,9.44e-09,61;CL:0002031,1.28e-08,120;CL:0000763,8.29e-08,108;CL:0000049,8.29e-08,108;CL:0000473,2.30e-07,48;CL:0000234,2.30e-07,48;CL:0000037,2.95e-07,168;CL:0002087,4.38e-07,115;CL:0002032,6.05e-07,161;CL:0000837,6.05e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-11!102;UBERON:0003061!1.05e-11!102;UBERON:0002371!2.07e-11!80;UBERON:0001474!2.43e-10!86;UBERON:0004765!1.11e-09!101;UBERON:0001434!1.11e-09!101;UBERON:0002193!4.23e-09!112;UBERON:0002405!1.09e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.84e-08;4!UBERON:0010133;6.84e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.33e-10,98;UBERON:0003061,3.33e-10,98;UBERON:0002371,6.29e-10,76;UBERON:0001474,2.37e-09,82;UBERON:0002193,4.41e-09,108;UBERON:0007023,5.37e-09,114;UBERON:0002405,5.10e-08,93;UBERON:0004765,7.82e-08,90;UBERON:0001434,1.55e-07,100;UBERON:0003296,1.60e-07,4;UBERON:0010133,1.60e-07,4 | |||
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| ||
|short_description=p4@FAM46A | |short_description=p4@FAM46A | ||
}} | }} |
Latest revision as of 23:14, 19 September 2015
Short description: | p4@FAM46A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM46A_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_NM_017633, uc003pjg.2_5end |
EntrezGene: | FAM46A |
HGNC: | 18345 |
UniProt: | Q96IP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.47e-12 | 72 |
myeloid lineage restricted progenitor cell | 1.09e-11 | 66 |
granulocyte monocyte progenitor cell | 2.14e-11 | 67 |
monopoietic cell | 2.92e-09 | 59 |
monocyte | 2.92e-09 | 59 |
monoblast | 2.92e-09 | 59 |
promonocyte | 2.92e-09 | 59 |
leukocyte | 6.69e-09 | 136 |
macrophage dendritic cell progenitor | 9.44e-09 | 61 |
hematopoietic lineage restricted progenitor cell | 1.28e-08 | 120 |
myeloid cell | 8.29e-08 | 108 |
common myeloid progenitor | 8.29e-08 | 108 |
defensive cell | 2.30e-07 | 48 |
phagocyte | 2.30e-07 | 48 |
hematopoietic stem cell | 2.95e-07 | 168 |
nongranular leukocyte | 4.38e-07 | 115 |
hematopoietic oligopotent progenitor cell | 6.05e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.05e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.33e-10 | 98 |
blood island | 3.33e-10 | 98 |
bone marrow | 6.29e-10 | 76 |
bone element | 2.37e-09 | 82 |
hemolymphoid system | 4.41e-09 | 108 |
adult organism | 5.37e-09 | 114 |
immune system | 5.10e-08 | 93 |
skeletal element | 7.82e-08 | 90 |
skeletal system | 1.55e-07 | 100 |
gland of diencephalon | 1.60e-07 | 4 |
neuroendocrine gland | 1.60e-07 | 4 |