FFCP PHASE1:Hg19::chr17:38020557..38020572,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UKT9 | |||
|association_with_transcript=-116bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2,uc0 | |||
|cluster_id=chr17:38020557..38020572,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_IKZF3_5end | |||
|id=chr17:38020557..38020572,- | |||
|ontology_enrichment_celltype=CL:0000542!7.87e-48!53;CL:0000051!7.87e-48!53;CL:0000838!9.11e-47!52;CL:0000738!1.74e-42!140;CL:0002087!2.11e-37!119;CL:0000037!4.49e-36!172;CL:0000566!4.49e-36!172;CL:0000988!1.35e-35!182;CL:0002031!2.98e-35!124;CL:0002032!3.57e-33!165;CL:0000837!3.57e-33!165;CL:0000945!1.84e-26!24;CL:0000826!1.84e-26!24;CL:0000791!5.61e-19!18;CL:0000789!5.61e-19!18;CL:0002420!5.61e-19!18;CL:0002419!5.61e-19!18;CL:0000790!5.61e-19!18;CL:0000084!3.10e-18!25;CL:0000827!3.10e-18!25;CL:0000236!4.62e-17!14;CL:0000625!1.96e-13!11;CL:0000080!4.43e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.50e-39;53!CL:0000945;2.57e-37;24!CL:0000791;1.57e-28;18!CL:0000789;1.57e-28;18!CL:0002419;1.57e-28;18!CL:0000084;4.62e-26;25!CL:0000236;3.57e-24;13!CL:0000625;6.17e-20;11!CL:0002087;1.21e-13;104!CL:0000624;3.81e-09;6!CL:0000738;4.04e-08;136!CL:0000988;4.46e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.85e-69,53;CL:0000051,2.85e-69,53;CL:0000838,1.26e-67,52;CL:0000738,4.08e-40,136;CL:0002087,1.47e-37,115;CL:0000945,2.06e-37,24;CL:0000826,2.06e-37,24;CL:0000988,5.66e-32,177;CL:0000037,5.88e-31,168;CL:0002031,6.21e-31,120;CL:0000791,1.51e-28,18;CL:0000789,1.51e-28,18;CL:0002420,1.51e-28,18;CL:0002419,1.51e-28,18;CL:0000790,1.51e-28,18;CL:0002032,4.46e-27,161;CL:0000837,4.46e-27,161;CL:0000084,4.94e-26,25;CL:0000827,4.94e-26,25;CL:0000236,1.43e-25,14;CL:0000625,6.08e-20,11;CL:0000624,3.47e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.50e-39;53!CL:0000790;1.57e-28;18 | |||
|ontology_enrichment_disease=DOID:0060058!7.59e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.57e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.62e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.11e-15!15;UBERON:0000179!1.11e-15!15;UBERON:0000463!1.11e-15!15;UBERON:0002390!4.01e-13!102;UBERON:0003061!4.01e-13!102;UBERON:0002193!3.53e-12!112;UBERON:0007023!3.74e-10!115;UBERON:0004177!4.70e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.96e-23;15!UBERON:0000179;1.96e-23;15!UBERON:0000463;1.96e-23;15!UBERON:0002390;1.17e-17;32!UBERON:0002193;8.90e-11;42!UBERON:0004177;3.42e-09;5!UBERON:0005057;3.42e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.98e-23,15;UBERON:0000179,1.98e-23,15;UBERON:0000463,1.98e-23,15;UBERON:0004177,1.29e-11,7;UBERON:0005057,1.29e-11,7;UBERON:0002390,1.66e-08,98;UBERON:0003061,1.66e-08,98;UBERON:0002193,1.80e-08,108;UBERON:0002370,5.89e-07,4;UBERON:0005058,5.89e-07,4;UBERON:0009113,5.89e-07,4;UBERON:0003295,5.89e-07,4;UBERON:0005562,5.89e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41872608282791,6.23964479819588,7.39881344348585,2.36018566109342,9.97956435052753,2.47705797305722,0,0,0,24.2472337816344,9.2410001116824,0,0,2.60707781711184,3.03815219002193,0.671746422719773,1.29557466407592,1.03030227053675,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0.768482119587302,0.47296445977717,0,0,0,0,0.272906150057846,0.449446968890169,0.306083892370903,1.28371610830437,0.639337125799041,0,0.598390972864896,0.426224750532694,0,1.13477044938228,0,0.502497330513487,1.0429658368404,0.217188844705117,0.605399502633369,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,35.1992488922645,40.9603958446599,31.1328238852244,33.2849573601876,37.6372227813852,38.5084134769504,31.0691090208885,32.4378276542024,36.4296300230047,25.2511991429504,31.728677934394,1.32171328579026,2.24203425192614,0,2.360517241366,2.75107533924415,3.49522548299166,5.85152733867373,4.88883399950386,1.89379122293893,1.94826728407911,5.01347055983281,3.82987679717288,4.43067789167242,7.31170432165542,15.2428670473553,12.7458160608681,2.30213066445147,1.10540007114339,2.60822777161547,4.89345658434799,5.08327573370455,6.27213142829861,4.98561107869291,4.59864592322305,5.84166657320471,5.81945291644857,14.6540090589084,11.7195021694155,10.4549724889321,11.293133930833,19.1979916731628,17.4903017173284,12.0756398542449,15.6014319414999,11.8947978502592,14.9766509638764,10.1377082717959,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0.132957960518865,0.238490624305342,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,5.73902029239046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,183.270724497291,0.968532774145487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12961773587702,11.6248148519137,12.2907717669925,11.5508732651774,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.51132920165282,3.8828556147351,6.83056369942044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,3.04468565539302,5.35246044999663,8.54470780761244,10.9586616710583,12.752230465672,8.43015304550532,11.3406601820004,8.72437693923697,0,0,0,9.84756828166309,1.87549976869378,2.34768083049767,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,1.23087398947712,0,0,2.81974010175699,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,30.3912307084262,0.251932747854276,0,5.78498585667027,0,0,0,0,0.887790650732402,4.7896618469388,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.831058409500782,0,0.19606253431774,0,0,0.635746315921515,0,0,0,0,0.995261931078505,1.06149077404007,3.05515072466813,10.0817183751411,5.18968543575312,3.55034628318548,0,0,0,10.5823777745086,0,0,0,1.20990716048664,0,0.505492637027904,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.261177619741208,0.34945333648406,0,0.0967563312890851,0,0,0.581934098930517,0,0,0,0,0,0,0,0.85381197895741,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.13223260174269,0,0,1.9221734262185,0.471612915298998,2.07119527673598,5.45782623993146,5.13790242934655,23.9931418810365,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,4.19973531295353,0,11.193973677953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,4.95506146489851,0,0.135939465953663,0,0,0,0.470958557103084,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0.196300467230486,0,0,0.205325613712494,1.1598144313382,0,0,0,0.118920090777569,0,0,0.150962843566674,1.62065732026684,1.74847648403166,0,0.245148321753905,0,0,0.297046400327086,0,0,13.2517324351594,7.02590978911991,8.69488056546882,0,0,0,0.730336388246517,3.21110498383179,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,1.70587185520785,0.23806443146374,7.87984699999275,5.21427600085206,0,0.445530107947154,0.404234377916439,0.435433495793923,0,16.7033091476177,1.36272190246085,0.665320713092027,0,0.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| |||
|short_description=p4@IKZF3 | |||
}} |
Latest revision as of 23:09, 19 September 2015
Short description: | p4@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IKZF3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -116bp_to_ENST00000293068, ENST00000346872, ENST00000348427, ENST00000377944, ENST00000377945, ENST00000377952, ENST00000377958, ENST00000394189, ENST00000488188, ENST00000535189, NM_012481, NM_183228, NM_183229, NM_183230, NM_183231, NM_183232, uc002hsu.2, uc002hsv.2, uc0 |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | Q9UKT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.85e-69 | 53 |
common lymphoid progenitor | 2.85e-69 | 53 |
lymphoid lineage restricted progenitor cell | 1.26e-67 | 52 |
leukocyte | 4.08e-40 | 136 |
nongranular leukocyte | 1.47e-37 | 115 |
lymphocyte of B lineage | 2.06e-37 | 24 |
pro-B cell | 2.06e-37 | 24 |
hematopoietic cell | 5.66e-32 | 177 |
hematopoietic stem cell | 5.88e-31 | 168 |
hematopoietic lineage restricted progenitor cell | 6.21e-31 | 120 |
mature alpha-beta T cell | 1.51e-28 | 18 |
alpha-beta T cell | 1.51e-28 | 18 |
immature T cell | 1.51e-28 | 18 |
mature T cell | 1.51e-28 | 18 |
immature alpha-beta T cell | 1.51e-28 | 18 |
hematopoietic oligopotent progenitor cell | 4.46e-27 | 161 |
hematopoietic multipotent progenitor cell | 4.46e-27 | 161 |
T cell | 4.94e-26 | 25 |
pro-T cell | 4.94e-26 | 25 |
B cell | 1.43e-25 | 14 |
CD8-positive, alpha-beta T cell | 6.08e-20 | 11 |
CD4-positive, alpha-beta T cell | 3.47e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.98e-23 | 15 |
haemolymphatic fluid | 1.98e-23 | 15 |
organism substance | 1.98e-23 | 15 |
hemopoietic organ | 1.29e-11 | 7 |
immune organ | 1.29e-11 | 7 |
hematopoietic system | 1.66e-08 | 98 |
blood island | 1.66e-08 | 98 |
hemolymphoid system | 1.80e-08 | 108 |
thymus | 5.89e-07 | 4 |
hemolymphoid system gland | 5.89e-07 | 4 |
thymic region | 5.89e-07 | 4 |
pharyngeal gland | 5.89e-07 | 4 |
thymus primordium | 5.89e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.62e-08 | 10 |