FFCP PHASE1:Hg19::chr9:107651937..107651972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=19 | |EntrezGene=19 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29 | |HGNC=29 | ||
|TSSclassifier=strong | |||
|UniProt=O95477 | |UniProt=O95477 | ||
|association_with_transcript=-461bp_to_AF165281,AJ012376_5end | |association_with_transcript=-461bp_to_AF165281,AJ012376_5end | ||
|cluster_id=chr9:107651937..107651972,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_3_at_ABCA1_5end | |description=CAGE_peak_3_at_ABCA1_5end | ||
|id=chr9:107651937..107651972,- | |id=chr9:107651937..107651972,- | ||
|ontology_enrichment_celltype=CL:0002535!8.99e-13!2;CL:0000181!7.77e-09!12;CL:0000417!7.77e-09!12;CL:0000668!7.77e-09!12;CL:0000414!7.77e-09!12;CL:0000412!7.77e-09!12;CL:0000182!7.77e-09!12;CL:0002563!2.35e-07!4 | |ontology_enrichment_celltype=CL:0002535!8.99e-13!2;CL:0000181!7.77e-09!12;CL:0000417!7.77e-09!12;CL:0000668!7.77e-09!12;CL:0000414!7.77e-09!12;CL:0000412!7.77e-09!12;CL:0000182!7.77e-09!12;CL:0002563!2.35e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.05e-24;12!CL:0002563;5.39e-19;4!CL:0002253;2.85e-10;2!CL:0002231;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.05e-24,12;CL:0002563,4.70e-19,4;CL:0000223,4.76e-15,58;CL:0002253,2.49e-10,2;CL:0002231,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.91e-41;11!UBERON:0009497;5.77e-35;13!UBERON:0003104;5.61e-21;31!UBERON:0001041;2.85e-15;30!CL:0000223;2.09e-09;58 | |||
|ontology_enrichment_disease=DOID:4362!3.18e-11!5 | |ontology_enrichment_disease=DOID:4362!3.18e-11!5 | ||
|ontology_enrichment_disease_v019=DOID:7;2.03e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,7.64e-08,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;5.22e-24;19!UBERON:0006925;5.22e-24;19!UBERON:0001242;5.39e-19;4!UBERON:0001262;5.39e-19;4!UBERON:0004786;5.39e-19;4!UBERON:0004808;5.39e-19;4!UBERON:0001277;5.39e-19;4!UBERON:0002423;2.70e-18;25!UBERON:0002365;1.04e-13;31!UBERON:0002330;1.04e-13;31!UBERON:0002368;3.49e-13;33!UBERON:0000485;2.76e-11;7!UBERON:0003929;2.76e-11;7!UBERON:0003350;5.41e-10;8!UBERON:0000949;1.03e-08;43!UBERON:0002530;3.74e-07;57 | |||
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|short_description=p3@ABCA1 | |short_description=p3@ABCA1 | ||
}} | }} |
Latest revision as of 23:05, 19 September 2015
Short description: | p3@ABCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABCA1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -461bp_to_AF165281, AJ012376_5end |
EntrezGene: | ABCA1 |
HGNC: | 29 |
UniProt: | O95477 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.05e-24 | 12 |
intestinal epithelial cell | 4.70e-19 | 4 |
endodermal cell | 4.76e-15 | 58 |
epithelial cell of large intestine | 2.49e-10 | 2 |
epithelial cell of prostate | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 7.64e-08 | 39 |