FFCP PHASE1:Hg19::chr22:33258007..33258041,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=427bp_to_AF035289_5end | |||
|cluster_id=chr22:33258007..33258041,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_14_at_TIMP3_5end | |||
|id=chr22:33258007..33258041,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.73e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.78e-10;3!CL:0000346;2.95e-08;3!CL:1000428;2.95e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.02e-10,3;CL:0000346,2.21e-08,3;CL:1000428,2.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.34e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.20e-11!57;UBERON:0007023!3.22e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;2.64e-11;4!UBERON:0004457;1.93e-10;9!UBERON:0000042;1.93e-10;9!UBERON:0003124;7.78e-10;3!UBERON:0000920;7.78e-10;3!UBERON:0006947;4.06e-09;3!UBERON:0004054;4.06e-09;3!UBERON:0003135;1.93e-08;11!UBERON:0000412;2.95e-08;3!UBERON:0001992;2.95e-08;3!UBERON:0003688;9.06e-08;6!UBERON:0002358;9.06e-08;6!UBERON:0003684;9.06e-08;6!UBERON:0001178;9.06e-08;6!UBERON:0005631;2.22e-07;10!UBERON:0000158;2.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.50e-11,4;UBERON:0004923,3.23e-10,66;UBERON:0000920,7.02e-10,3;UBERON:0006947,3.48e-09,3;UBERON:0004054,3.48e-09,3;UBERON:0003135,1.06e-08,11;UBERON:0000412,2.21e-08,3;UBERON:0001992,2.21e-08,3;UBERON:0004457,1.27e-07,12;UBERON:0000042,1.27e-07,12;UBERON:0003688,1.31e-07,6;UBERON:0002358,1.31e-07,6;UBERON:0003684,1.31e-07,6;UBERON:0001178,1.31e-07,6;UBERON:0005631,3.33e-07,14;UBERON:0000158,3.33e-07,14;UBERON:0003124,3.77e-07,7 | |||
|phase1_expression=0.908391896352783,1.07050261945492,1.12763523276777,3.00219895059391,0.446961094427288,2.61701557230111,0,1.26343974685366,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,1.5905718941022,1.45990461090791,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,0.379891534993739,0.264818361626438,0.573673241497627,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0,0,0.468642863667593,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0.103325781175765,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,1.4351170855109,0.427114777637135,1.27159140695737,1.50045548042201,0.515262646192195,0.772921620136887,0.744467425326359,2.02531598689519,0.292311015483596,0.504867548488229,0.276149695926898,0.484938170456436,1.06502877754984,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0.829312462163088,0.144119953416961,0,0,0,1.17217447210047,0,0.411309970813294,0.600686115687835,0.285826432630578,0.448524337381443,0,0.2933531432838,1.03417372606222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.892144943985809,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0.907170879989041,0.496215615637554,0.153461973288062,1.12264037773229,0.512556597022804,3.07024349440022,2.2519548960105,0,1.23367755042124,0.887808626565635,0.164254312027618,0.519254429183621,1.04589340613963,0.120859449591622,0.601519410909855,0.184161977871793,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0.618246069886334,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0.10115778085555,0.464845549297286,4.7221852024596,1.3940745403212,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,2.99557291623744,0,0.78494864019923,0,0,0,0,1.58510321173008,0,0,0.487426979262569,6.33900880540533,0.136499911407986,0.141405431953713,0,0.551365343546124,0,1.31535265576129,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0,0,1.26664581178598,1.97576935775941,0.379473173765715,0.349934720244983,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,2.19762268907841,0,0,0,4.53614521001611,0.890894042497916,4.30024982938925,0,0.703347082052564,0,0,0,0.597743964753209,0.276283915531148,0,0.102268682502155,0,3.11039587661807,0,0,0,1.479651084554,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0,0.846452843541768,0.113942055847001,0,0,0,12.7600463892768,2.74792780205587,21.854425816764,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,1.57833761139756,1.20990716048664,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,2.09672001890436,0,0,0,0,1.35784623083787,0,0.90392296312213,0,0,0,0,0,0.640358984218058,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0.407992870545287,0.288950589901519,0,0,0,0,0,6.7027776305341,0.916641696046735,0,0.199679000498991,1.28767814440971,1.11585728720936,0.201550417460179,0.360299883542404,0,0.236349546921671,0,0.0674035438541849,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0.945668487590378,0.157363764404994,0,0,0,2.1440859791201,1.32418394073086,0,0,0.864221491201268,0,0,0,0,0.339936274560377,0.146552233678082,0,0.387848869084652,0,0,0,1.9221734262185,1.25763444079733,4.97086866416635,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0.138348634936231,0,0.151649117541648,0,5.41111385305795,0,0,0.149254802886874,0,1.10961172300523,0,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0.147855149989634,0.159296767163702,0,0.155262956876259,0.829412415681711,1.86089200190596,0.52174506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| |||
|short_description=p14@TIMP3 | |||
}} |
Latest revision as of 22:58, 19 September 2015
Short description: | p14@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 427bp_to_AF035289_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.02e-10 | 3 |
hair follicle dermal papilla cell | 2.21e-08 | 3 |
stem cell of epidermis | 2.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.50e-11 | 4 |
organ component layer | 3.23e-10 | 66 |
egg chorion | 7.02e-10 | 3 |
male genital duct | 3.48e-09 | 3 |
internal male genitalia | 3.48e-09 | 3 |
male reproductive organ | 1.06e-08 | 11 |
dermal papilla | 2.21e-08 | 3 |
papillary layer of dermis | 2.21e-08 | 3 |
cavity lining | 1.27e-07 | 12 |
serous membrane | 1.27e-07 | 12 |
omentum | 1.31e-07 | 6 |
peritoneum | 1.31e-07 | 6 |
abdominal cavity | 1.31e-07 | 6 |
visceral peritoneum | 1.31e-07 | 6 |
extraembryonic membrane | 3.33e-07 | 14 |
membranous layer | 3.33e-07 | 14 |
chorion | 3.77e-07 | 7 |