FFCP PHASE1:Hg19::chr22:33257962..33257975,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:33257962..33257975,+ to FFCP PHASE1:Hg19::chr22:33257962..33257975,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=382bp_to_AF035289_5end | |||
|cluster_id=chr22:33257962..33257975,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_19_at_TIMP3_5end | |||
|id=chr22:33257962..33257975,+ | |||
|ontology_enrichment_celltype=CL:0000057!7.66e-11!75;CL:0002334!7.85e-10!12;CL:0000055!8.50e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.38e-14;3!CL:0002334;7.20e-12;12!CL:0002593;1.84e-09;2!CL:0000723;2.09e-08;61!CL:0002595;4.82e-08;5!CL:0000134;7.00e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.26e-14,3;CL:0002334,6.83e-12,12;CL:0002593,1.89e-09,2;CL:0002595,5.33e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.95e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.05e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004923!6.79e-09!57;UBERON:0007023!4.89e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.38e-14;3!UBERON:0000920;3.38e-14;3!UBERON:0004457;3.26e-11;9!UBERON:0000042;3.26e-11;9!UBERON:0005631;4.98e-11;10!UBERON:0000158;4.98e-11;10!UBERON:0002456;1.84e-09;2!UBERON:0005406;2.47e-09;2!UBERON:0003834;4.82e-08;5!UBERON:0001533;4.82e-08;5!UBERON:0003688;9.10e-07;6!UBERON:0002358;9.10e-07;6!UBERON:0003684;9.10e-07;6!UBERON:0001178;9.10e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.26e-14,3;UBERON:0005631,8.34e-11,14;UBERON:0000158,8.34e-11,14;UBERON:0003124,2.64e-10,7;UBERON:0005406,1.66e-09,2;UBERON:0004923,1.75e-09,66;UBERON:0002456,1.89e-09,2;UBERON:0004457,2.83e-08,12;UBERON:0000042,2.83e-08,12;UBERON:0003834,5.33e-08,5;UBERON:0001533,5.33e-08,5 | |||
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| ||
|short_description=p19@TIMP3 | |||
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Latest revision as of 22:58, 19 September 2015
Short description: | p19@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 382bp_to_AF035289_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.26e-14 | 3 |
preadipocyte | 6.83e-12 | 12 |
smooth muscle cell of the internal thoracic artery | 1.89e-09 | 2 |
smooth muscle cell of the subclavian artery | 5.33e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.26e-14 | 3 |
extraembryonic membrane | 8.34e-11 | 14 |
membranous layer | 8.34e-11 | 14 |
chorion | 2.64e-10 | 7 |
perirenal fat | 1.66e-09 | 2 |
organ component layer | 1.75e-09 | 66 |
internal thoracic artery | 1.89e-09 | 2 |
cavity lining | 2.83e-08 | 12 |
serous membrane | 2.83e-08 | 12 |
thoracic segment blood vessel | 5.33e-08 | 5 |
subclavian artery | 5.33e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.05e-07 | 14 |