FFCP PHASE1:Hg19::chr22:33256911..33256925,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_AK098517_5end | |association_with_transcript=-67bp_to_AK098517_5end | ||
|cluster_id=chr22:33256911..33256925,+ | |||
|coexpression_cluster_id=C1492 | |||
|description=CAGE_peak_3_at_TIMP3_5end | |description=CAGE_peak_3_at_TIMP3_5end | ||
|id=chr22:33256911..33256925,+ | |id=chr22:33256911..33256925,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.30e-12!180;CL:0002334!5.58e-08!12;CL:0000057!7.16e-08!75 | |ontology_enrichment_celltype=CL:0000055!3.30e-12!180;CL:0002334!5.58e-08!12;CL:0000057!7.16e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.44e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.37e-09,12;CL:0000057,5.29e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.65e-11!365;UBERON:0007023!2.99e-11!115;UBERON:0000468!1.89e-09!659;UBERON:0004923!2.14e-09!57;UBERON:0004121!2.35e-09!169;UBERON:0000924!6.53e-09!173;UBERON:0006601!6.53e-09!173;UBERON:0000467!5.20e-08!625;UBERON:0000480!7.83e-08!626;UBERON:0000481!1.33e-07!347;UBERON:0005631!3.80e-07!14;UBERON:0000158!3.80e-07!14;UBERON:0000477!6.01e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,8.74e-11,66;UBERON:0007023,2.89e-09,114;UBERON:0005631,2.88e-08,14;UBERON:0000158,2.88e-08,14;UBERON:0004872,8.20e-07,83 | |||
|phase1_expression=6.7221000330106,10.2768251467672,13.6725771973092,2.00146596706261,0,3.48935409640147,2.53299878168311,2.52687949370732,1.04474251279935,1.96587149201207,0,10.2667444901181,7.3854753903967,0.74259811776028,0,4.70627602516243,1.80808358407193,2.92124036154949,2.43966399395253,0,0,1.56727360739044,1.14494394852423,1.09499540058307,1.63205431473244,0,0,0,0,0,0.619264493264304,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.01210257911091,5.4980901592718,0,0.50133791063589,5.35932120155048,6.36228757640879,27.7381876072502,0.945348171640679,2.88248216701333,1.49319135678314,7.00738053912763,0.364295288292542,0.370784442784429,0.649094787309367,1.39303789839414,0.664789802594326,0,0,0,0,0,0,0,0,0,0,2.84258435086262,1.42306505074684,1.67360306382335,0.402829317109147,2.28081631715554,2.68468263302986,0,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0,0,0,1.3082821564276,39.7577561356255,8.737505304856,4.10468460520978,2.0078563452417,2.4826786753885,3.36406560085384,4.2699598291882,2.4666754841716,1.55605517699883,0.134710672069688,0,0.151357427644931,0.576175924479999,6.09235722767871,3.43376084513353,0,1.64393548606981,0,0,0,3.87892925384297,4.79053837515895,4.85631171526098,3.56400857184616,11.3742787468136,0,2.15585442544872,2.02003336744879,0.750711119231785,0.277064115484183,1.75591048352335,6.43624371177941,3.45547535485173,0.680593098960126,0.717558542755448,2.34913127700424,12.2920502672546,1.20036438433761,0.618315175430633,1.8034837803194,10.7947776672322,32.2362794580819,0.584622030967192,0.504867548488229,7.08784219545705,0.484938170456436,0,0.604512589365842,5.76506013855658,0.773043412653187,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,15.6449532329816,9.64861407289328,4.14404764057442,4.64367928031979,2.16563844500876,0.354920400119532,0.337169380156203,0,0.441175890929576,0,0.474541238222193,0.808987848960987,0.392442930250692,0.38474715694639,0,5.60967095213783,0.8231480226628,2.94017422771084,1.26755034821831,0,0.590789906681404,0,0.737930631258681,0.686271241194102,3.07300799144152,0,0.100528972411631,0.648119116109707,19.5484983186195,1.03993478527958,4.3299402607582,0.927443239800615,0.352226082707465,3.03169540298255,6.48179717607255,6.84914948044554,0.790204397959275,0,0,0.468008530278475,0.297262324577456,0,0.503946384596579,1.13420077793909,4.47792613514241,2.61570544662566,2.68367875415648,4.43396914106349,2.64145302039678,3.31724984865235,6.91775776401415,2.77733353538036,1.20645999155121,1.90994212779139,0,5.13217338068116,6.16964956219941,27.6315613216404,2.5724378936752,0.560655421726804,0,10.4873748723959,15.3833341751756,7.15312891703765,7.607724773004,1.86156681609409,0,1.28603687131071,0,1.3321108950805,4.14636181608628,0.542621605391443,0,4.88604276440603,5.33087923113819,0,1.50719688529793,0.871533458600294,4.59875759437462,0,0,2.10833939483032,0.479249710983165,1.14861935834114,1.42636905040718,0.289562613335158,1.2328579353023,0.358121926479791,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.613457458595699,0,0,7.69492187663986,6.95873056308931,5.20417969611984,4.09994952474496,5.71797589482666,9.09630016223939,3.10419213877515,3.32112799267718,2.58116835958384,8.51459421787212,0.783204629850962,0,0,0,0,3.63753085735511,8.32177197552485,6.04780586659361,13.397821622214,13.5046536493495,19.084886421449,15.1204196121727,25.0736552042685,31.6882224652907,4.45254199334973,27.1409061092674,24.8586415438378,11.2514203738919,6.75030757938707,2.78904908303902,0.362578348774867,1.60405176242628,1.93370076765382,3.21480454860899,0.728364672026868,1.18011973463482,0.451199612907412,0.385076685522074,0,0,0.316654886678627,0,0.170093705276516,2.15915916102139,1.54227252690289,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0.522870902049801,19.4902095088456,11.4805125994897,22.1257308371726,12.2618803860789,0,0,1.14853107599234,1.95018073810956,0,7.83032818166188,0.308097234229289,0,0.137836572484531,0.322260734604821,0.580066775656914,0.852266274161009,3.47224939022276,0.991709492165869,3.0750410778417,0.765676274967505,0.910420027699949,0.464845549297286,3.77774816196768,7.6674099717666,2.46426864140871,3.72614221221915,3.47973196830029,2.03856641014312,0.143124886741991,8.18748412591268,0.632758849437452,1.71567174531442,2.81487570442467,33.8071800546797,2.22742273548156,0,1.79872457583315,0.274537029736055,0.117812402345686,5.86329196562617,9.5106192703805,1.26377536871694,0,24.858775942391,7.39551027297288,0,2.82810863907426,18.0812986592388,3.85955740482287,10.6150236038595,2.19225442626881,1.73632660280006,17.0532635532125,2.02910376962704,2.478587984798,0,2.43799298746888,7.17217999395784,4.280052617775,0,25.755131506315,3.29294892959902,2.2768390425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| ||
|short_description=p3@TIMP3 | |short_description=p3@TIMP3 | ||
}} | }} |
Latest revision as of 22:54, 19 September 2015
Short description: | p3@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TIMP3_5end |
Coexpression cluster: | C1492_chorionic_amniotic_Smooth_basal_spindle_placenta_mesenchymal |
Association with transcript: | -67bp_to_AK098517_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.37e-09 | 12 |
fibroblast | 5.29e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 8.74e-11 | 66 |
adult organism | 2.89e-09 | 114 |
extraembryonic membrane | 2.88e-08 | 14 |
membranous layer | 2.88e-08 | 14 |
splanchnic layer of lateral plate mesoderm | 8.20e-07 | 83 |