FFCP PHASE1:Hg19::chr19:54984271..54984286,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:54984271..54984286,-
|short_description=p2@CDC42EP5
|description=CAGE_peak_2_at_CDC42EP5_5end
|association_with_transcript=31bp_to_ENST00000472703_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148170 | |EntrezGene=148170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17408 | |HGNC=17408 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000472703_5end | |||
|cluster_id=chr19:54984271..54984286,- | |||
|description=CAGE_peak_2_at_CDC42EP5_5end | |||
|id=chr19:54984271..54984286,- | |||
|ontology_enrichment_celltype=CL:0000055!4.29e-16!180;CL:0002321!3.62e-14!248;CL:0000222!3.80e-14!119;CL:0000220!4.19e-14!246;CL:0000115!1.00e-13!35;CL:0002139!4.14e-12!24;CL:0002078!1.49e-11!44;CL:0000183!1.78e-09!59;CL:0000057!5.54e-09!75;CL:0000187!6.28e-09!54;CL:0000071!8.43e-09!18;CL:0002546!8.43e-09!18;CL:0000680!1.68e-08!57;CL:0000056!1.68e-08!57;CL:0000355!1.68e-08!57;CL:0000213!2.34e-08!57;CL:0000215!2.34e-08!57;CL:0000393!2.05e-07!60;CL:0000211!2.05e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.99e-11;36!CL:0002139;3.29e-10;24!CL:0002078;5.97e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.41e-14,36;CL:0000222,9.83e-12,121;CL:0002078,1.63e-11,45;CL:0002139,9.93e-11,24;CL:0002321,2.70e-09,250;CL:0000213,6.03e-08,58;CL:0000215,6.03e-08,58;CL:0000071,5.12e-07,18;CL:0002546,5.12e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.01e-19!79;UBERON:0007798!7.01e-19!79;UBERON:0004872!2.07e-18!84;UBERON:0004535!6.23e-18!110;UBERON:0001009!3.06e-17!113;UBERON:0000055!7.71e-15!69;UBERON:0001981!8.31e-13!60;UBERON:0007500!8.31e-13!60;UBERON:0004537!8.31e-13!60;UBERON:0006965!8.31e-13!60;UBERON:0000486!1.54e-12!82;UBERON:0003914!3.66e-12!118;UBERON:0000490!3.78e-12!138;UBERON:0000914!8.70e-11!83;UBERON:0002329!8.70e-11!83;UBERON:0003077!8.70e-11!83;UBERON:0003059!8.70e-11!83;UBERON:0007282!8.70e-11!83;UBERON:0009618!8.70e-11!83;UBERON:0007285!8.70e-11!83;UBERON:0005256!2.28e-10!143;UBERON:0004290!9.64e-10!70;UBERON:0000468!1.78e-09!659;UBERON:0002385!5.26e-09!63;UBERON:0001015!5.26e-09!63;UBERON:0000383!5.26e-09!63;UBERON:0000119!5.65e-09!312;UBERON:0001986!8.43e-09!18;UBERON:0004638!8.43e-09!18;UBERON:0004852!8.43e-09!18;UBERON:0002100!1.08e-08!216;UBERON:0001134!1.10e-08!61;UBERON:0002036!1.10e-08!61;UBERON:0003082!1.10e-08!61;UBERON:0001637!1.89e-08!42;UBERON:0003509!1.89e-08!42;UBERON:0004572!1.89e-08!42;UBERON:0000483!2.23e-08!309;UBERON:0004573!9.45e-08!33;UBERON:0004571!9.45e-08!33;UBERON:0003102!1.56e-07!95;UBERON:0003104!2.72e-07!238;UBERON:0009142!2.72e-07!238;UBERON:0006914!5.93e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.29e-14,78;UBERON:0007798,5.29e-14,78;UBERON:0004535,6.42e-13,109;UBERON:0004872,2.52e-12,83;UBERON:0001009,3.52e-12,112;UBERON:0000055,2.50e-11,68;UBERON:0007500,2.49e-09,59;UBERON:0001981,2.49e-09,59;UBERON:0004537,2.49e-09,59;UBERON:0006965,2.49e-09,59;UBERON:0000490,2.99e-09,148;UBERON:0003914,3.30e-08,117;UBERON:0000486,6.31e-08,83;UBERON:0007503,2.62e-07,78;UBERON:0004638,5.12e-07,18;UBERON:0001986,5.12e-07,18;UBERON:0004852,5.12e-07,18;UBERON:0007524,5.33e-07,73 | |||
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| ||
|short_description=p2@CDC42EP5 | |||
}} | }} |
Latest revision as of 22:46, 19 September 2015
Short description: | p2@CDC42EP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC42EP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000472703_5end |
EntrezGene: | CDC42EP5 |
HGNC: | 17408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.41e-14 | 36 |
mesodermal cell | 9.83e-12 | 121 |
meso-epithelial cell | 1.63e-11 | 45 |
endothelial cell of vascular tree | 9.93e-11 | 24 |
embryonic cell | 2.70e-09 | 250 |
lining cell | 6.03e-08 | 58 |
barrier cell | 6.03e-08 | 58 |
blood vessel endothelial cell | 5.12e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.12e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vasculature | 5.29e-14 | 78 |
vascular system | 5.29e-14 | 78 |
cardiovascular system | 6.42e-13 | 109 |
splanchnic layer of lateral plate mesoderm | 2.52e-12 | 83 |
circulatory system | 3.52e-12 | 112 |
vessel | 2.50e-11 | 68 |
epithelial tube open at both ends | 2.49e-09 | 59 |
blood vessel | 2.49e-09 | 59 |
blood vasculature | 2.49e-09 | 59 |
vascular cord | 2.49e-09 | 59 |
unilaminar epithelium | 2.99e-09 | 148 |
epithelial tube | 3.30e-08 | 117 |
multilaminar epithelium | 6.31e-08 | 83 |
epithelial vesicle | 2.62e-07 | 78 |
blood vessel endothelium | 5.12e-07 | 18 |
endothelium | 5.12e-07 | 18 |
cardiovascular system endothelium | 5.12e-07 | 18 |
dense mesenchyme tissue | 5.33e-07 | 73 |