FFCP PHASE1:Hg19::chr19:54984271..54984286,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148170 | |EntrezGene=148170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17408 | |HGNC=17408 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000472703_5end | |association_with_transcript=31bp_to_ENST00000472703_5end | ||
|cluster_id=chr19:54984271..54984286,- | |||
|description=CAGE_peak_2_at_CDC42EP5_5end | |description=CAGE_peak_2_at_CDC42EP5_5end | ||
|id=chr19:54984271..54984286,- | |id=chr19:54984271..54984286,- | ||
|ontology_enrichment_celltype=CL:0000055!4.29e-16!180;CL:0002321!3.62e-14!248;CL:0000222!3.80e-14!119;CL:0000220!4.19e-14!246;CL:0000115!1.00e-13!35;CL:0002139!4.14e-12!24;CL:0002078!1.49e-11!44;CL:0000183!1.78e-09!59;CL:0000057!5.54e-09!75;CL:0000187!6.28e-09!54;CL:0000071!8.43e-09!18;CL:0002546!8.43e-09!18;CL:0000680!1.68e-08!57;CL:0000056!1.68e-08!57;CL:0000355!1.68e-08!57;CL:0000213!2.34e-08!57;CL:0000215!2.34e-08!57;CL:0000393!2.05e-07!60;CL:0000211!2.05e-07!60 | |ontology_enrichment_celltype=CL:0000055!4.29e-16!180;CL:0002321!3.62e-14!248;CL:0000222!3.80e-14!119;CL:0000220!4.19e-14!246;CL:0000115!1.00e-13!35;CL:0002139!4.14e-12!24;CL:0002078!1.49e-11!44;CL:0000183!1.78e-09!59;CL:0000057!5.54e-09!75;CL:0000187!6.28e-09!54;CL:0000071!8.43e-09!18;CL:0002546!8.43e-09!18;CL:0000680!1.68e-08!57;CL:0000056!1.68e-08!57;CL:0000355!1.68e-08!57;CL:0000213!2.34e-08!57;CL:0000215!2.34e-08!57;CL:0000393!2.05e-07!60;CL:0000211!2.05e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.99e-11;36!CL:0002139;3.29e-10;24!CL:0002078;5.97e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.41e-14,36;CL:0000222,9.83e-12,121;CL:0002078,1.63e-11,45;CL:0002139,9.93e-11,24;CL:0002321,2.70e-09,250;CL:0000213,6.03e-08,58;CL:0000215,6.03e-08,58;CL:0000071,5.12e-07,18;CL:0002546,5.12e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.01e-19!79;UBERON:0007798!7.01e-19!79;UBERON:0004872!2.07e-18!84;UBERON:0004535!6.23e-18!110;UBERON:0001009!3.06e-17!113;UBERON:0000055!7.71e-15!69;UBERON:0001981!8.31e-13!60;UBERON:0007500!8.31e-13!60;UBERON:0004537!8.31e-13!60;UBERON:0006965!8.31e-13!60;UBERON:0000486!1.54e-12!82;UBERON:0003914!3.66e-12!118;UBERON:0000490!3.78e-12!138;UBERON:0000914!8.70e-11!83;UBERON:0002329!8.70e-11!83;UBERON:0003077!8.70e-11!83;UBERON:0003059!8.70e-11!83;UBERON:0007282!8.70e-11!83;UBERON:0009618!8.70e-11!83;UBERON:0007285!8.70e-11!83;UBERON:0005256!2.28e-10!143;UBERON:0004290!9.64e-10!70;UBERON:0000468!1.78e-09!659;UBERON:0002385!5.26e-09!63;UBERON:0001015!5.26e-09!63;UBERON:0000383!5.26e-09!63;UBERON:0000119!5.65e-09!312;UBERON:0001986!8.43e-09!18;UBERON:0004638!8.43e-09!18;UBERON:0004852!8.43e-09!18;UBERON:0002100!1.08e-08!216;UBERON:0001134!1.10e-08!61;UBERON:0002036!1.10e-08!61;UBERON:0003082!1.10e-08!61;UBERON:0001637!1.89e-08!42;UBERON:0003509!1.89e-08!42;UBERON:0004572!1.89e-08!42;UBERON:0000483!2.23e-08!309;UBERON:0004573!9.45e-08!33;UBERON:0004571!9.45e-08!33;UBERON:0003102!1.56e-07!95;UBERON:0003104!2.72e-07!238;UBERON:0009142!2.72e-07!238;UBERON:0006914!5.93e-07!25 | |ontology_enrichment_uberon=UBERON:0002049!7.01e-19!79;UBERON:0007798!7.01e-19!79;UBERON:0004872!2.07e-18!84;UBERON:0004535!6.23e-18!110;UBERON:0001009!3.06e-17!113;UBERON:0000055!7.71e-15!69;UBERON:0001981!8.31e-13!60;UBERON:0007500!8.31e-13!60;UBERON:0004537!8.31e-13!60;UBERON:0006965!8.31e-13!60;UBERON:0000486!1.54e-12!82;UBERON:0003914!3.66e-12!118;UBERON:0000490!3.78e-12!138;UBERON:0000914!8.70e-11!83;UBERON:0002329!8.70e-11!83;UBERON:0003077!8.70e-11!83;UBERON:0003059!8.70e-11!83;UBERON:0007282!8.70e-11!83;UBERON:0009618!8.70e-11!83;UBERON:0007285!8.70e-11!83;UBERON:0005256!2.28e-10!143;UBERON:0004290!9.64e-10!70;UBERON:0000468!1.78e-09!659;UBERON:0002385!5.26e-09!63;UBERON:0001015!5.26e-09!63;UBERON:0000383!5.26e-09!63;UBERON:0000119!5.65e-09!312;UBERON:0001986!8.43e-09!18;UBERON:0004638!8.43e-09!18;UBERON:0004852!8.43e-09!18;UBERON:0002100!1.08e-08!216;UBERON:0001134!1.10e-08!61;UBERON:0002036!1.10e-08!61;UBERON:0003082!1.10e-08!61;UBERON:0001637!1.89e-08!42;UBERON:0003509!1.89e-08!42;UBERON:0004572!1.89e-08!42;UBERON:0000483!2.23e-08!309;UBERON:0004573!9.45e-08!33;UBERON:0004571!9.45e-08!33;UBERON:0003102!1.56e-07!95;UBERON:0003104!2.72e-07!238;UBERON:0009142!2.72e-07!238;UBERON:0006914!5.93e-07!25 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.29e-14,78;UBERON:0007798,5.29e-14,78;UBERON:0004535,6.42e-13,109;UBERON:0004872,2.52e-12,83;UBERON:0001009,3.52e-12,112;UBERON:0000055,2.50e-11,68;UBERON:0007500,2.49e-09,59;UBERON:0001981,2.49e-09,59;UBERON:0004537,2.49e-09,59;UBERON:0006965,2.49e-09,59;UBERON:0000490,2.99e-09,148;UBERON:0003914,3.30e-08,117;UBERON:0000486,6.31e-08,83;UBERON:0007503,2.62e-07,78;UBERON:0004638,5.12e-07,18;UBERON:0001986,5.12e-07,18;UBERON:0004852,5.12e-07,18;UBERON:0007524,5.33e-07,73 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,1.34088328328186,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0,0.697801167972428,2.40285509343189,3.16520373874144,0.74259811776028,0.994192127183747,0,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,2.75826367343678,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.69490601792545,4.2194645408365,0.361439152384566,0.50133791063589,1.30361867064741,0,2.43317435151318,0.0945348171640679,0.221729397462564,0.263504357079378,0.458426764241994,1.82147644146271,1.48313777113772,0,0,0,0,0,0,1.78886166630035,0.860234595106124,1.73570250803797,0.56530794192401,0.419499436209906,1.6507082516404,1.8809546988313,9.30300333009584,6.04802646567407,1.67360306382335,6.44526907374635,2.28081631715554,6.83373761134875,2.20597848207521,4.86085168729056,1.3394959242612,0.673588117878509,0.788280363383256,1.53316637465883,0.949265659568129,2.74802615895611,0,0,1.3082821564276,1.49091585508596,1.01304409331664,0.264818361626438,0.860509862246441,1.41867352879343,3.36406560085384,3.20246987189115,0.98667019366864,2.48968828319813,1.48181739276657,0.490385709340376,8.1733010928263,11.5235184896,2.10889288650417,2.18512053781224,0.570471821544449,2.24173020827702,0.117434498643765,0.323745888736263,0,0.61246251376468,0.491337269247072,0.309977343527296,1.18800285728205,0.989067717114227,0,0.718618141816238,1.0100166837244,1.00094815897571,0,0,0.612975591598039,1.05166641234618,2.38207584636044,0.179389635688862,1.70845911054854,2.54318281391474,0.600182192168805,1.75189299705346,0,3.35010341396862,0.337552664482532,1.46155507741798,0,1.93304787148829,5.81925804547723,0,1.0075209822764,1.01736355386293,0.193260853163297,0.818238361772504,0.286804595389004,1.58565817968474,0,1.04574548582567,2.17688215532278,1.26160425437814,0,3.12899064659632,1.92972281457866,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,5.90524363699719,2.80483547606892,3.2925920906512,7.3504355692771,0,0,0,0,0.122988438543114,0.514703430895577,2.19500570817251,2.24803506515239,0.502644862058154,2.31471112896324,2.28065813717227,0,0,0,0.469634776943287,2.45422961193825,4.1668696131895,0.761016608938393,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0,0.581267877027924,0.383382679165211,0,0,0,0,0,0.190493682876507,0.381988425558278,1.17217447210047,0,0.102827492703324,0.901029173531752,0.857479297891735,0.784917590417525,4.79556075716608,0.66004457238855,0.646358578788889,17.8828222925941,0.845302752556,0.26593811658487,0,1.02882949704857,0,1.5985330740966,0.857867961948885,2.71310802695722,0,1.30294473717494,2.13235169245527,0.791951872933429,0.602878754119172,1.74306691720059,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,4.00136416847742,2.44138521329762,1.24782516918484,1.42743191037729,0.788512075169673,0.585707074963566,8.42649079237613,9.09630016223939,10.3473071292505,1.32845119707087,1.29058417979192,4.08352987999989,3.91602314925481,9.60801586670397,0,0,0,2.72814814301633,6.65741758041988,3.93107381328584,0.496215615637554,0,0.841980283299221,0.128139149255701,1.53512174720011,0.965123526861645,1.48418066444991,0,0.887808626565635,0.246381468041427,0,0.116210378459959,1.32945394550784,2.6065841139427,0.828728900423067,0.34444334449382,0.364182336013434,2.22911505431021,0.451199612907412,0.231046011313244,0,0,0,4.54933536283586,1.70093705276516,0.647747748306418,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,1.16004861950546,0.462145851343933,0.767518373630648,0.551346289938122,1.07420244868274,2.0302337147992,0.426133137080504,3.38321735457602,4.46269271474641,1.34533047155574,1.14851441245126,2.32662895967765,1.39453664789186,0,2.0911118104818,1.54016790088044,1.06461206063404,0,2.96518750566272,1.00187420719394,2.60510858551767,0.632758849437452,1.14378116354295,0,1.28381696410176,2.54562598340749,1.56989728039846,0.719489830333259,1.09814811894422,0.589062011728432,1.01091240786658,0,0.421258456238981,0.975267478179181,1.94970791705028,2.11300293513511,1.09199929126389,0.141405431953713,0,1.10273068709225,0,3.06915619677634,1.15755106853338,2.62357900818653,0.202910376962704,0.92947049429925,0.563391205064483,0.143411352204052,0.294747123039363,0,0,1.68886108238131,0.658589785919804,2.65631221636001,5.94889024416471,0.384888450902048,2.68120910214315,2.17781969722645,0.282431402330337,1.29151611801369,1.68471475667626,3.54744122829341,1.37834040124176,0,0,0,0,0,0,0,0,7.47768497892312,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0.95497793895076,0.593929361665277,0,0,0,0.111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| ||
|short_description=p2@CDC42EP5 | |short_description=p2@CDC42EP5 | ||
}} | }} |
Latest revision as of 22:46, 19 September 2015
Short description: | p2@CDC42EP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC42EP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000472703_5end |
EntrezGene: | CDC42EP5 |
HGNC: | 17408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.41e-14 | 36 |
mesodermal cell | 9.83e-12 | 121 |
meso-epithelial cell | 1.63e-11 | 45 |
endothelial cell of vascular tree | 9.93e-11 | 24 |
embryonic cell | 2.70e-09 | 250 |
lining cell | 6.03e-08 | 58 |
barrier cell | 6.03e-08 | 58 |
blood vessel endothelial cell | 5.12e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.12e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vasculature | 5.29e-14 | 78 |
vascular system | 5.29e-14 | 78 |
cardiovascular system | 6.42e-13 | 109 |
splanchnic layer of lateral plate mesoderm | 2.52e-12 | 83 |
circulatory system | 3.52e-12 | 112 |
vessel | 2.50e-11 | 68 |
epithelial tube open at both ends | 2.49e-09 | 59 |
blood vessel | 2.49e-09 | 59 |
blood vasculature | 2.49e-09 | 59 |
vascular cord | 2.49e-09 | 59 |
unilaminar epithelium | 2.99e-09 | 148 |
epithelial tube | 3.30e-08 | 117 |
multilaminar epithelium | 6.31e-08 | 83 |
epithelial vesicle | 2.62e-07 | 78 |
blood vessel endothelium | 5.12e-07 | 18 |
endothelium | 5.12e-07 | 18 |
cardiovascular system endothelium | 5.12e-07 | 18 |
dense mesenchyme tissue | 5.33e-07 | 73 |