FFCP PHASE1:Hg19::chr22:33255539..33255550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_X80791_5end | |association_with_transcript=76bp_to_X80791_5end | ||
|cluster_id=chr22:33255539..33255550,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_8_at_TIMP3_5end | |description=CAGE_peak_8_at_TIMP3_5end | ||
|id=chr22:33255539..33255550,+ | |id=chr22:33255539..33255550,+ | ||
|ontology_enrichment_celltype=CL:0000057!9.98e-10!75;CL:0000055!2.89e-09!180;CL:0002334!2.58e-08!12 | |ontology_enrichment_celltype=CL:0000057!9.98e-10!75;CL:0000055!2.89e-09!180;CL:0002334!2.58e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.08e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.55e-14,12;CL:0000057,1.43e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!6.48e-11!57;UBERON:0000475!2.96e-08!365;UBERON:0007023!2.10e-07!115;UBERON:0005631!2.34e-07!14;UBERON:0000158!2.34e-07!14;UBERON:0003102!2.72e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.96e-08;14!UBERON:0005631;5.07e-07;10!UBERON:0000158;5.07e-07;10!UBERON:0004457;9.83e-07;9!UBERON:0000042;9.83e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.08e-09,14;UBERON:0000158,4.08e-09,14;UBERON:0004923,2.14e-08,66;UBERON:0001013,1.06e-07,14;UBERON:0003124,1.15e-07,7;UBERON:0002199,6.16e-07,46;UBERON:0002416,6.16e-07,46 | |||
|phase1_expression=2.54349730978779,2.35510576280081,2.11431606143957,3.00219895059391,0.893922188854576,6.10636966870258,0,1.26343974685366,0.261185628199839,0.245733936501509,0.697801167972428,2.40285509343189,0.791300934685361,0,0,0,1.20538905604795,0,0.975865597581014,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,0.361439152384566,0,1.15877215168659,0.795285947051099,5.83961844363163,0.0945348171640679,0.221729397462564,0,0.589405839739707,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,4.96971951695318,2.40597972162702,0.529636723252875,6.02356903572509,2.83734705758686,0.560677600142307,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0.70296429550139,0.936480230490962,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,2.47266929278557,0,0,0,0.500474079487857,0,0,0.919463387397059,0.600952235626387,0,4.30535125653269,1.49490172172997,1.69545520927649,6.90209520994125,0.92747276314595,3.34932702059318,2.41951913231067,3.03797398034279,1.16924406193438,2.27190396819703,1.01254888506529,2.10139873864455,4.9701342952326,0.906768884048762,0.169560592310488,0.193260853163297,0,0,0,0,0.232387885739037,0.10366105501537,0,0,3.12899064659632,1.92972281457866,2.76269842704961,2.78620756819187,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.539325232640658,0,0,3.69077727312324,0,0.8231480226628,1.47008711385542,1.26755034821831,0,1.18157981336281,0,0.491953754172454,0,0.439001141634502,0,0.201057944823262,0,1.3032332212413,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.951270761172991,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.447792613514241,0.581267877027924,0,0,0.792435906119034,2.90259361757081,2.45003920808834,1.64115163454294,0.126995788584338,2.29193055334967,0,0,1.85089486865982,4.20480280981484,0.571652865261156,0.672786506072164,0,1.1734125731352,1.93907573636667,0,2.535908257668,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0.699810938274399,0,0,0,0,0,2.85273810081437,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.12269149171914,0,0,3.53550464602372,2.85486382075459,1.41932173530541,0.702848489956279,4.8151375956435,6.82222512167955,2.0694614258501,0,0.368738337083406,2.25897397617015,2.34961388955289,1.37257369524342,0,0,0,0.606255142892519,1.66435439510497,2.41912234663744,3.2254015016441,1.53461973288062,1.68396056659844,1.92208723883551,4.60536524160033,3.86049410744658,2.96836132889982,4.00945203886904,8.5229628150301,2.13530605635904,1.03850885836724,3.7187321107187,0.846016147141356,1.20303882181971,0.920809889358963,0.68888668898764,0.364182336013434,0,0,0,0,0,0.211103257785751,0,0.510281115829547,0.647747748306418,4.62681758070868,0,0,0,0,0,0,0,1.02580050046556,0.984043937099117,0.650756789328606,2.7821073144885,0.0915694648183434,0,0,0,1.6068392984416,1.25671933779759,0.308097234229289,0,0,0.107420244868274,0.435050081742686,0.255679882248303,0.445160178233687,0.495854746082934,0.384380134730212,0.255225424989168,0.30347334256665,0.929691098594572,20.4628025439916,0,0,0.532306030317022,0,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0,9.41465773674625,0,0.78494864019923,0,0,0,1.2130948894399,0,0.842516912477962,0,5.36169677188826,7.39551027297288,0.545999645631943,1.55545975149084,2.26016233240486,0,3.3171948762061,1.75380354101505,0,3.9353685122798,0,0.30982349809975,0.281695602532241,0.430234056612155,0.491245205065606,0.35667105148125,0.354761064070598,2.53329162357197,4.28083360847872,0,0.699869440489966,0.0962221127255121,0.670302275535787,0,2.35359501941948,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.811367035427949,0,0,0,9.52303165267311,0,0,0,8.83354593529453,2.67268212749375,10.1363031692747,0,0.281338832821026,0,0,0.211125408127993,1.19548792950642,0.552567831062295,0,1.1249555075237,0,7.77598969154519,0,0,0,1.28236427328014,0,0,0,0.463840490809256,0,0,0,13.0499923578263,0.227586896570999,0,0.236387681767936,0,0,0,0.885741385813839,0.241192877250816,1.52581736317083,0,1.18219047581419,0.438770794307945,0.10893846351899,0.557694977114413,2.38545801361771,0.227884111694002,0.23056390438806,0,0.108647371922008,21.0540765423067,14.4724197574942,87.9507380430747,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0.619202951523374,0.611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| ||
|short_description=p8@TIMP3 | |short_description=p8@TIMP3 | ||
}} | }} |
Latest revision as of 22:39, 19 September 2015
Short description: | p8@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 76bp_to_X80791_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.55e-14 | 12 |
fibroblast | 1.43e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.08e-09 | 14 |
membranous layer | 4.08e-09 | 14 |
organ component layer | 2.14e-08 | 66 |
adipose tissue | 1.06e-07 | 14 |
chorion | 1.15e-07 | 7 |
integument | 6.16e-07 | 46 |
integumental system | 6.16e-07 | 46 |