FFCP PHASE1:Hg19::chr14:36990061..36990072,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVG2 | |UniProt=F8VVG2 | ||
|association_with_transcript=81bp_to_ENST00000546983_5end | |||
|cluster_id=chr14:36990061..36990072,- | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_11_at_NKX2-1_5end | |||
|id=chr14:36990061..36990072,- | |||
|ontology_enrichment_celltype=CL:0002553!2.22e-07!1;CL:0000167!7.15e-07!1;CL:0000164!7.15e-07!1;CL:0000502!7.15e-07!1;CL:0000172!7.15e-07!1;CL:0000173!7.15e-07!1;CL:0002351!7.15e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.88e-21;1!CL:0000082;4.64e-17;19!CL:0000322;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.88e-21,1;CL:0000082,5.04e-17,19;CL:0000322,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.78e-33;29!UBERON:0001041;3.58e-32;30 | |||
|ontology_enrichment_disease=DOID:0050615!6.72e-09!16;DOID:3112!3.78e-07!1;DOID:4430!7.15e-07!1;DOID:0050619!9.51e-07!1;DOID:1357!9.51e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.75e-21;15!DOID:3905;2.41e-20;9!DOID:0050615;3.60e-20;16!DOID:3908;8.47e-17;5!DOID:1325;3.53e-12;7!DOID:3904;3.53e-12;7!DOID:3910;3.89e-11;2!DOID:4556;5.54e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.95e-21,15;DOID:3905,2.75e-20,9;DOID:0050615,3.97e-20,16;DOID:3908,9.55e-17,5;DOID:1325,3.96e-12,7;DOID:3904,3.96e-12,7;DOID:3910,4.52e-11,2;DOID:4556,5.54e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.04e-18!5;UBERON:0004117!1.04e-18!5;UBERON:0007689!1.04e-18!5;UBERON:0007123!1.04e-18!5;UBERON:0003091!1.04e-18!5;UBERON:0005911!1.52e-12!82;UBERON:0002048!2.27e-12!22;UBERON:0000117!2.27e-12!22;UBERON:0000171!2.27e-12!22;UBERON:0000170!2.27e-12!22;UBERON:0005597!2.27e-12!22;UBERON:0000118!2.27e-12!22;UBERON:0000341!3.13e-12!2;UBERON:0005153!2.76e-11!37;UBERON:0008947!6.90e-11!38;UBERON:0003258!6.90e-11!38;UBERON:0000065!4.65e-09!53;UBERON:0009722!1.45e-08!11;UBERON:0007690!1.45e-08!11;UBERON:0004119!6.21e-08!169;UBERON:0000925!6.21e-08!169;UBERON:0006595!6.21e-08!169;UBERON:0001007!6.24e-08!155;UBERON:0001555!6.24e-08!155;UBERON:0007026!6.24e-08!155;UBERON:0005157!9.14e-08!51;UBERON:0005178!1.15e-07!34;UBERON:0002224!1.15e-07!34;UBERON:0001004!1.56e-07!72;UBERON:0005181!2.02e-07!35;UBERON:0002171!2.09e-07!1;UBERON:0006518!2.09e-07!1;UBERON:0008949!2.09e-07!1;UBERON:0000101!2.09e-07!1;UBERON:0002167!2.09e-07!1;UBERON:0001764!9.51e-07!1;UBERON:0001825!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;7.28e-44;22!UBERON:0000117;7.28e-44;22!UBERON:0000171;7.28e-44;22!UBERON:0000170;7.28e-44;22!UBERON:0005178;3.35e-24;34!UBERON:0002224;3.35e-24;34!UBERON:0005181;5.97e-22;35!UBERON:0002171;1.53e-21;1!UBERON:0006518;1.53e-21;1!UBERON:0008949;1.53e-21;1!UBERON:0000101;1.53e-21;1!UBERON:0002167;1.53e-21;1!UBERON:0004802;4.64e-17;19!UBERON:0000115;4.64e-17;19!UBERON:0000065;3.15e-16;44!UBERON:0004807;8.57e-15;22!UBERON:0000915;9.27e-12;52!UBERON:0004903;3.89e-11;2!UBERON:0002173;3.89e-11;2!UBERON:0002186;3.89e-11;2!UBERON:0001004;5.68e-09;65!UBERON:0005911;9.35e-09;36!UBERON:0004821;7.50e-08;3!UBERON:0007499;7.50e-08;3!UBERON:0003215;7.50e-08;3!UBERON:0010368;7.50e-08;3!UBERON:0009911;7.50e-08;3!UBERON:0002299;7.50e-08;3!UBERON:0006524;7.50e-08;3!UBERON:0008874;7.50e-08;3!UBERON:0002169;7.50e-08;3!UBERON:0004894;7.50e-08;3!UBERON:0000072;2.84e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,8.01e-44,22;UBERON:0000117,8.01e-44,22;UBERON:0000171,8.01e-44,22;UBERON:0000170,8.01e-44,22;UBERON:0005597,8.01e-44,22;UBERON:0000118,8.01e-44,22;UBERON:0005178,2.34e-28,34;UBERON:0002224,2.34e-28,34;UBERON:0005181,1.52e-27,35;UBERON:0005153,4.71e-26,37;UBERON:0008947,2.29e-25,38;UBERON:0003258,2.29e-25,38;UBERON:0002171,1.53e-21,1;UBERON:0006518,1.53e-21,1;UBERON:0008949,1.53e-21,1;UBERON:0000101,1.53e-21,1;UBERON:0002167,1.53e-21,1;UBERON:0005157,1.72e-20,47;UBERON:0000915,1.65e-18,52;UBERON:0000065,8.10e-18,54;UBERON:0004802,5.04e-17,19;UBERON:0000115,5.04e-17,19;UBERON:0005911,3.55e-15,82;UBERON:0001004,5.95e-13,74;UBERON:0004807,1.10e-11,28;UBERON:0004903,4.52e-11,2;UBERON:0002173,4.52e-11,2;UBERON:0002186,4.52e-11,2;UBERON:0001041,5.57e-11,87;UBERON:0005177,2.03e-09,101;UBERON:0009569,1.83e-08,112;UBERON:0001007,2.37e-08,145;UBERON:0001555,2.37e-08,145;UBERON:0007026,2.37e-08,145;UBERON:0004921,6.02e-08,118;UBERON:0004821,8.29e-08,3;UBERON:0003215,8.29e-08,3;UBERON:0010368,8.29e-08,3;UBERON:0009911,8.29e-08,3;UBERON:0002299,8.29e-08,3;UBERON:0006524,8.29e-08,3;UBERON:0008874,8.29e-08,3;UBERON:0002169,8.29e-08,3;UBERON:0004894,8.29e-08,3;UBERON:0001048,1.40e-07,160;UBERON:0004119,1.57e-07,160;UBERON:0000925,1.57e-07,160;UBERON:0006595,1.57e-07,160;UBERON:0000072,4.34e-07,47 | |||
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|short_description=p11@NKX2-1 | |||
}} | }} |
Latest revision as of 22:38, 19 September 2015
Short description: | p11@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NKX2-1_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 81bp_to_ENST00000546983_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | F8VVG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.88e-21 | 1 |
epithelial cell of lung | 5.04e-17 | 19 |
pneumocyte | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.95e-21 | 15 |
lung carcinoma | 2.75e-20 | 9 |
respiratory system cancer | 3.97e-20 | 16 |
non-small cell lung carcinoma | 9.55e-17 | 5 |
bronchus cancer | 3.96e-12 | 7 |
bronchogenic carcinoma | 3.96e-12 | 7 |
lung adenocarcinoma | 4.52e-11 | 2 |
lung large cell carcinoma | 5.54e-08 | 3 |