FFCP PHASE1:Hg19::chr14:36989412..36989423,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001wtu.2,uc001wtv.2_5end | |association_with_transcript=0bp_to_uc001wtu.2,uc001wtv.2_5end | ||
|cluster_id=chr14:36989412..36989423,- | |||
|coexpression_cluster_id=C1394 | |||
|description=CAGE_peak_12_at_NKX2-1_5end | |description=CAGE_peak_12_at_NKX2-1_5end | ||
|id=chr14:36989412..36989423,- | |id=chr14:36989412..36989423,- | ||
|ontology_enrichment_celltype=CL:0000082!3.43e-07!19 | |ontology_enrichment_celltype=CL:0000082!3.43e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.30e-19;1!CL:0000082;1.08e-15;19!CL:0000322;1.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.56e-19,1;CL:0000082,1.19e-15,19;CL:0000322,1.82e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.24e-57;5!UBERON:0008947;2.11e-10;29!UBERON:0001041;4.57e-10;30!UBERON:0009847;2.32e-07;3!UBERON:0003353;2.32e-07;3 | |||
|ontology_enrichment_disease=DOID:3908!6.18e-08!5;DOID:3905!1.91e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:1324;9.20e-20;15!DOID:3112;1.30e-19;1!DOID:3905;7.91e-19;9!DOID:0050615;1.48e-18;16!DOID:3908;1.13e-15;5!DOID:1325;2.36e-11;7!DOID:3904;2.36e-11;7!DOID:3910;1.43e-10;2!DOID:4556;2.05e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.04e-19,15;DOID:3112,1.30e-19,1;DOID:3905,8.67e-19,9;DOID:0050615,1.66e-18,16;DOID:3908,1.05e-15,5;DOID:1325,2.69e-11,7;DOID:3904,2.69e-11,7;DOID:3910,1.43e-10,2;DOID:4556,1.93e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.02e-13!5;UBERON:0004117!1.02e-13!5;UBERON:0007689!1.02e-13!5;UBERON:0007123!1.02e-13!5;UBERON:0003091!1.02e-13!5;UBERON:0002048!2.04e-13!22;UBERON:0000117!2.04e-13!22;UBERON:0000171!2.04e-13!22;UBERON:0000170!2.04e-13!22;UBERON:0005597!2.04e-13!22;UBERON:0000118!2.04e-13!22;UBERON:0008947!1.76e-10!38;UBERON:0003258!1.76e-10!38;UBERON:0005178!6.53e-10!34;UBERON:0002224!6.53e-10!34;UBERON:0000065!9.78e-10!53;UBERON:0005181!1.43e-09!35;UBERON:0005153!4.42e-09!37;UBERON:0000369!6.25e-09!4;UBERON:0002435!6.25e-09!4;UBERON:0000204!6.25e-09!4;UBERON:0010082!6.25e-09!4;UBERON:0005911!6.88e-09!82;UBERON:0009663!7.53e-09!7;UBERON:0000341!8.85e-09!2;UBERON:0001873!1.16e-08!2;UBERON:0010122!1.16e-08!2;UBERON:0005157!2.41e-07!51;UBERON:0004802!3.43e-07!19;UBERON:0000115!3.43e-07!19;UBERON:0002308!6.84e-07!9;UBERON:0002420!6.84e-07!9;UBERON:0000125!6.84e-07!9;UBERON:0007245!6.84e-07!9;UBERON:0010009!6.84e-07!9;UBERON:0010011!6.84e-07!9;UBERON:0000454!6.84e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.24e-57;5!UBERON:0004802;1.08e-15;19!UBERON:0000115;1.08e-15;19!UBERON:0002048;1.33e-13;22!UBERON:0004807;1.33e-13;22!UBERON:0000117;1.33e-13;22!UBERON:0000171;1.33e-13;22!UBERON:0000170;1.33e-13;22!UBERON:0004903;1.43e-10;2!UBERON:0002173;1.43e-10;2!UBERON:0002186;1.43e-10;2!UBERON:0002368;9.39e-09;33!UBERON:0005181;4.61e-08;35!UBERON:0005911;4.62e-08;36!UBERON:0005178;1.15e-07;34!UBERON:0002224;1.15e-07;34!UBERON:0004821;1.82e-07;3!UBERON:0007499;1.82e-07;3!UBERON:0003215;1.82e-07;3!UBERON:0010368;1.82e-07;3!UBERON:0009911;1.82e-07;3!UBERON:0002299;1.82e-07;3!UBERON:0006524;1.82e-07;3!UBERON:0008874;1.82e-07;3!UBERON:0002169;1.82e-07;3!UBERON:0004894;1.82e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.80e-57,5;UBERON:0004117,1.80e-57,5;UBERON:0007689,1.80e-57,5;UBERON:0007123,1.80e-57,5;UBERON:0003091,1.80e-57,5;UBERON:0009722,1.91e-26,11;UBERON:0007690,1.91e-26,11;UBERON:0005911,2.74e-17,82;UBERON:0008814,2.43e-16,18;UBERON:0004802,1.19e-15,19;UBERON:0000115,1.19e-15,19;UBERON:0002048,1.44e-13,22;UBERON:0000117,1.44e-13,22;UBERON:0000171,1.44e-13,22;UBERON:0000170,1.44e-13,22;UBERON:0005597,1.44e-13,22;UBERON:0000118,1.44e-13,22;UBERON:0005153,2.29e-12,37;UBERON:0004807,9.80e-11,28;UBERON:0004903,1.43e-10,2;UBERON:0002173,1.43e-10,2;UBERON:0002186,1.43e-10,2;UBERON:0005157,9.45e-10,47;UBERON:0001007,1.89e-09,145;UBERON:0001555,1.89e-09,145;UBERON:0007026,1.89e-09,145;UBERON:0005178,6.80e-09,34;UBERON:0002224,6.80e-09,34;UBERON:0005181,1.20e-08,35;UBERON:0002368,1.44e-08,35;UBERON:0004119,1.66e-08,160;UBERON:0000925,1.66e-08,160;UBERON:0006595,1.66e-08,160;UBERON:0003929,1.99e-08,54;UBERON:0008947,5.49e-08,38;UBERON:0003258,5.49e-08,38;UBERON:0002530,1.03e-07,59;UBERON:0004821,1.82e-07,3;UBERON:0003215,1.82e-07,3;UBERON:0010368,1.82e-07,3;UBERON:0009911,1.82e-07,3;UBERON:0002299,1.82e-07,3;UBERON:0006524,1.82e-07,3;UBERON:0008874,1.82e-07,3;UBERON:0002169,1.82e-07,3;UBERON:0004894,1.82e-07,3;UBERON:0001048,9.87e-07,160 | |||
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| ||
|short_description=p12@NKX2-1 | |short_description=p12@NKX2-1 | ||
}} | }} |
Latest revision as of 22:33, 19 September 2015
Short description: | p12@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NKX2-1_5end |
Coexpression cluster: | C1394_large_bronchioalveolar_prostate_nonsmall_papillary_small_Alveolar |
Association with transcript: | 0bp_to_uc001wtu.2, uc001wtv.2_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.56e-19 | 1 |
epithelial cell of lung | 1.19e-15 | 19 |
pneumocyte | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.04e-19 | 15 |
papillary adenocarcinoma | 1.30e-19 | 1 |
lung carcinoma | 8.67e-19 | 9 |
respiratory system cancer | 1.66e-18 | 16 |
non-small cell lung carcinoma | 1.05e-15 | 5 |
bronchus cancer | 2.69e-11 | 7 |
bronchogenic carcinoma | 2.69e-11 | 7 |
lung adenocarcinoma | 1.43e-10 | 2 |
lung large cell carcinoma | 1.93e-07 | 3 |