FFCP PHASE1:Hg19::chr1:203154486..203154506,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt=Q59FK1 | |UniProt=Q59FK1 | ||
|association_with_transcript=-181bp_to_AB209459_5end | |association_with_transcript=-181bp_to_AB209459_5end | ||
|cluster_id=chr1:203154486..203154506,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_8_at_CHI3L1_5end | |description=CAGE_peak_8_at_CHI3L1_5end | ||
|id=chr1:203154486..203154506,- | |id=chr1:203154486..203154506,- | ||
|ontology_enrichment_celltype=CL:0000153!2.14e-12!9;CL:0000447!2.14e-12!9;CL:0000667!5.10e-10!6;CL:0000058!5.10e-10!6;CL:0000138!5.10e-10!6;CL:0000135!6.20e-08!3;CL:0000386!6.20e-08!3;CL:0000388!6.20e-08!3;CL:0000327!1.79e-07!14;CL:0000499!8.66e-07!27;CL:0000188!9.57e-07!9 | |ontology_enrichment_celltype=CL:0000153!2.14e-12!9;CL:0000447!2.14e-12!9;CL:0000667!5.10e-10!6;CL:0000058!5.10e-10!6;CL:0000138!5.10e-10!6;CL:0000135!6.20e-08!3;CL:0000386!6.20e-08!3;CL:0000388!6.20e-08!3;CL:0000327!1.79e-07!14;CL:0000499!8.66e-07!27;CL:0000188!9.57e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000153;5.22e-40;9!CL:0000447;5.22e-40;9!CL:0000138;4.40e-31;6!CL:0000327;9.98e-24;15!CL:0000235;1.19e-20;6!CL:0000499;1.92e-20;28!CL:0002540;6.82e-12;6!CL:0000135;2.81e-11;3!CL:0000388;2.81e-11;3!CL:0000214;4.77e-11;3!CL:0000182;5.99e-10;12!CL:0000151;8.25e-10;36!CL:0002092;2.52e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,6.98e-40,9;CL:0000447,6.98e-40,9;CL:0000058,5.47e-31,6;CL:0000138,5.47e-31,6;CL:0000327,1.19e-23,15;CL:0000235,1.08e-20,6;CL:0000499,2.16e-20,28;CL:0000151,4.10e-12,36;CL:0002540,6.34e-12,6;CL:0000135,2.81e-11,3;CL:0000388,2.81e-11,3;CL:0000214,5.15e-11,3;CL:0000182,5.78e-10,12;CL:0002092,2.42e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.84e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;8.05e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.65e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.38e-23!57;UBERON:0005068!3.38e-23!57;UBERON:0006241!3.38e-23!57;UBERON:0007135!3.38e-23!57;UBERON:0007023!4.62e-19!115;UBERON:0002616!7.52e-19!59;UBERON:0002020!1.34e-18!34;UBERON:0003528!1.34e-18!34;UBERON:0001893!3.44e-18!34;UBERON:0001869!1.07e-17!32;UBERON:0001017!3.14e-17!82;UBERON:0002791!6.01e-17!33;UBERON:0000955!4.94e-16!69;UBERON:0006238!4.94e-16!69;UBERON:0005743!4.97e-16!86;UBERON:0002780!7.24e-16!41;UBERON:0001890!7.24e-16!41;UBERON:0006240!7.24e-16!41;UBERON:0003080!2.31e-15!42;UBERON:0003075!6.96e-14!86;UBERON:0007284!6.96e-14!86;UBERON:0000073!1.04e-13!94;UBERON:0001016!1.04e-13!94;UBERON:0002346!6.57e-13!90;UBERON:0002619!3.25e-12!22;UBERON:0001950!1.83e-11!20;UBERON:0002308!7.09e-11!9;UBERON:0000125!7.09e-11!9;UBERON:0000956!1.95e-10!25;UBERON:0000203!1.95e-10!25;UBERON:0003076!2.71e-09!15;UBERON:0003057!2.71e-09!15;UBERON:0003056!5.71e-09!61;UBERON:0002298!9.45e-09!8;UBERON:0000033!5.78e-08!123;UBERON:0002420!5.87e-08!9;UBERON:0007245!5.87e-08!9;UBERON:0010009!5.87e-08!9;UBERON:0010011!5.87e-08!9;UBERON:0000454!5.87e-08!9;UBERON:0000043!6.20e-08!3;UBERON:0009663!1.72e-07!7;UBERON:0004733!2.14e-07!12;UBERON:0002028!2.14e-07!12;UBERON:0007277!2.14e-07!12;UBERON:0000025!2.22e-07!194;UBERON:0000153!2.94e-07!129;UBERON:0007811!2.94e-07!129;UBERON:0001896!7.12e-07!3;UBERON:0005290!7.12e-07!3;UBERON:0010096!7.12e-07!3;UBERON:0004732!9.66e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.81e-11;3!UBERON:0000043;2.81e-11;3!UBERON:0007845;2.81e-11;3!UBERON:0006915;4.77e-11;3!UBERON:0007616;4.77e-11;3!UBERON:0002217;4.77e-11;3!UBERON:0002018;4.77e-11;3!UBERON:0002107;1.84e-09;19!UBERON:0006925;1.84e-09;19!UBERON:0001282;1.05e-08;1!UBERON:0009842;1.05e-08;1!UBERON:0003704;1.05e-08;1!UBERON:0001171;1.05e-08;1!UBERON:0001172;1.05e-08;1!UBERON:0002363;1.84e-08;1!UBERON:0002365;5.18e-08;31!UBERON:0002330;5.18e-08;31!UBERON:0002423;3.81e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.81e-11,3;UBERON:0000043,2.81e-11,3;UBERON:0007845,2.81e-11,3;UBERON:0006915,5.15e-11,3;UBERON:0007616,5.15e-11,3;UBERON:0002217,5.15e-11,3;UBERON:0002018,5.15e-11,3;UBERON:0002107,1.84e-09,19;UBERON:0006925,1.84e-09,19;UBERON:0008836,1.84e-09,19;UBERON:0001282,1.05e-08,1;UBERON:0009842,1.05e-08,1;UBERON:0003704,1.05e-08,1;UBERON:0001171,1.05e-08,1;UBERON:0001172,1.05e-08,1;UBERON:0002363,1.53e-08,1;UBERON:0007645,1.53e-08,1;UBERON:0007647,1.53e-08,1;UBERON:0010115,1.53e-08,1;UBERON:0008835,3.80e-08,22;UBERON:0003894,3.80e-08,22;UBERON:0002365,5.94e-08,31;UBERON:0002330,5.94e-08,31;UBERON:0009854,8.76e-08,23;UBERON:0007499,3.81e-07,25;UBERON:0009497,3.81e-07,25;UBERON:0000015,3.81e-07,25;UBERON:0002423,3.81e-07,25;UBERON:0006235,3.81e-07,25;UBERON:0004161,3.81e-07,25;UBERON:0009856,7.31e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.44575660953827,4.01070328508712,4.20054904986389,16.7010048880731,6.8128881842369,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,7.02012795417713,6.8370334652815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,0,12.6500363689819,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,2.99161459204025,0,0,0,0,0,0,0,0,0,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,6.75544432952525,4.28083360847872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0.921722292925374,0.447352215784832,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0,0.295547618953547,0,0,0,0.0769502585037971,3.41826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19828350517124,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.366078794705889,0,0.573409195690071,0.554645257684261,0.310482014706917,0,0,0,0,0,0,0,0,0,0.554805861502613,1.89403005275089,11.5721234806185,7.11848977277229,0,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.638535436228605,0.205116364240755,0,0.484100767249525,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,1.2401207790071,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,4.97315227368514,0.135939465953663,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,1.03608082081518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.407948941145488,0,0,5.20793025433452,31.8901183755679,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.44575660953827,4.01070328508712,4.20054904986389,16.7010048880731,6.8128881842369,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,7.02012795417713,6.8370334652815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,0,12.6500363689819,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,2.99161459204025,0,0,0,0,0,0,0,0,0,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,6.75544432952525,4.28083360847872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0.921722292925374,0.447352215784832,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0,0.295547618953547,0,0,0,0.0769502585037971,3.41826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19828350517124,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.366078794705889,0,0.573409195690071,0.554645257684261,0.310482014706917,0,0,0,0,0,0,0,0,0,0.554805861502613,1.89403005275089,11.5721234806185,7.11848977277229,0,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.638535436228605,0.205116364240755,0,0.484100767249525,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,1.2401207790071,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,4.97315227368514,0.135939465953663,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,1.03608082081518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.407948941145488,0,0,5.20793025433452,31.8901183755679,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p8@CHI3L1 | |short_description=p8@CHI3L1 | ||
}} | }} |
Latest revision as of 22:27, 19 September 2015
Short description: | p8@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | -181bp_to_AB209459_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | Q59FK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 6.98e-40 | 9 |
carbohydrate secreting cell | 6.98e-40 | 9 |
chondroblast | 5.47e-31 | 6 |
chondrocyte | 5.47e-31 | 6 |
extracellular matrix secreting cell | 1.19e-23 | 15 |
macrophage | 1.08e-20 | 6 |
stromal cell | 2.16e-20 | 28 |
secretory cell | 4.10e-12 | 36 |
mesenchymal stem cell of the bone marrow | 6.34e-12 | 6 |
fibrocyte | 2.81e-11 | 3 |
tendon cell | 2.81e-11 | 3 |
synovial cell | 5.15e-11 | 3 |
hepatocyte | 5.78e-10 | 12 |
bone marrow cell | 2.42e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.81e-11 | 3 |
tendon | 2.81e-11 | 3 |
regular connective tissue | 2.81e-11 | 3 |
stratified squamous epithelium | 5.15e-11 | 3 |
layer of synovial tissue | 5.15e-11 | 3 |
synovial joint | 5.15e-11 | 3 |
synovial membrane of synovial joint | 5.15e-11 | 3 |
liver | 1.84e-09 | 19 |
digestive gland | 1.84e-09 | 19 |
liver bud | 1.84e-09 | 19 |
intralobular bile duct | 1.05e-08 | 1 |
acinus | 1.05e-08 | 1 |
intrahepatic bile duct | 1.05e-08 | 1 |
portal lobule | 1.05e-08 | 1 |
hepatic acinus | 1.05e-08 | 1 |
dura mater | 1.53e-08 | 1 |
future meninx | 1.53e-08 | 1 |
ectomeninx | 1.53e-08 | 1 |
future dura mater | 1.53e-08 | 1 |
hepatic diverticulum | 3.80e-08 | 22 |
liver primordium | 3.80e-08 | 22 |
exocrine gland | 5.94e-08 | 31 |
exocrine system | 5.94e-08 | 31 |
digestive tract diverticulum | 8.76e-08 | 23 |
epithelial sac | 3.81e-07 | 25 |
epithelium of foregut-midgut junction | 3.81e-07 | 25 |
anatomical boundary | 3.81e-07 | 25 |
hepatobiliary system | 3.81e-07 | 25 |
foregut-midgut junction | 3.81e-07 | 25 |
septum transversum | 3.81e-07 | 25 |
sac | 7.31e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.65e-09 | 1 |