FFCP PHASE1:Hg19::chr22:32925236..32925258,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8224 | |EntrezGene=8224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11496 | |HGNC=11496 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-167bp_to_ENST00000461446_5end | |association_with_transcript=-167bp_to_ENST00000461446_5end | ||
|cluster_id=chr22:32925236..32925258,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_8_at_SYN3_5end | |description=CAGE_peak_8_at_SYN3_5end | ||
|id=chr22:32925236..32925258,- | |id=chr22:32925236..32925258,- | ||
|ontology_enrichment_celltype=CL:0002541!6.17e-17!3 | |ontology_enrichment_celltype=CL:0002541!6.17e-17!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.66e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.27e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.23e-66;1!UBERON:0004872;8.16e-11;7!UBERON:0005795;5.73e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!6.17e-17!3;UBERON:0000920!6.17e-17!3;UBERON:0003124!9.75e-13!7;UBERON:0002106!3.31e-08!3;UBERON:0004854!3.31e-08!3;UBERON:0009034!3.31e-08!3;UBERON:0002095!3.31e-08!3;UBERON:0004782!3.31e-08!3;UBERON:0003281!3.31e-08!3;UBERON:0009664!3.31e-08!3;UBERON:0002296!3.31e-08!3;UBERON:0005602!3.31e-08!3;UBERON:0001179!3.31e-08!3;UBERON:0006293!3.31e-08!3;UBERON:0002135!7.77e-07!1;UBERON:0002171!9.67e-07!1;UBERON:0006518!9.67e-07!1;UBERON:0008949!9.67e-07!1;UBERON:0000101!9.67e-07!1;UBERON:0002167!9.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.96e-34;2!UBERON:0003124;3.66e-23;3!UBERON:0000920;3.66e-23;3!UBERON:0001987;7.35e-18;4!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0000478;3.86e-12;24!UBERON:0001894;9.43e-11;7!UBERON:0005631;6.34e-08;10!UBERON:0000158;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.49e-38,7;UBERON:0000007,7.05e-34,2;UBERON:0000920,3.27e-23,3;UBERON:0005631,5.89e-20,14;UBERON:0000158,5.89e-20,14;UBERON:0001987,7.35e-18,4;UBERON:0004340,7.35e-18,4;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0000478,3.75e-12,24;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7 | |||
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|short_description=p8@SYN3 | |short_description=p8@SYN3 | ||
}} | }} |
Latest revision as of 22:15, 19 September 2015
Short description: | p8@SYN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SYN3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -167bp_to_ENST00000461446_5end |
EntrezGene: | SYN3 |
HGNC: | 11496 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.49e-38 | 7 |
pituitary gland | 7.05e-34 | 2 |
egg chorion | 3.27e-23 | 3 |
extraembryonic membrane | 5.89e-20 | 14 |
membranous layer | 5.89e-20 | 14 |
placenta | 7.35e-18 | 4 |
allantois | 7.35e-18 | 4 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
extraembryonic structure | 3.75e-12 | 24 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |