FFCP PHASE1:Hg19::chr1:203148919..203148937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-308bp_to_uc001gzl.3_5end | |association_with_transcript=-308bp_to_uc001gzl.3_5end | ||
|cluster_id=chr1:203148919..203148937,- | |||
|coexpression_cluster_id=C283 | |coexpression_cluster_id=C283 | ||
|description=CAGE_peak_16_at_CHI3L1_5end | |description=CAGE_peak_16_at_CHI3L1_5end | ||
|id=chr1:203148919..203148937,- | |id=chr1:203148919..203148937,- | ||
|ontology_enrichment_celltype=CL:0000153;9.54e-51;9!CL:0000447;9.54e-51;9!CL:0000138;2.40e-39;6!CL:0000327;3.07e-30;15!CL:0000499;2.59e-26;28!CL:0000235;8.72e-26;6!CL:0000135;5.92e-14;3!CL:0000388;5.92e-14;3!CL:0000214;1.20e-13;3!CL:0000151;5.53e-10;36!CL:0000182;1.32e-07;12!CL:0002540;1.81e-07;6 | |ontology_enrichment_celltype=CL:0000153!2.52e-18!9;CL:0000447!2.52e-18!9;CL:0000667!1.37e-14!6;CL:0000058!1.37e-14!6;CL:0000138!1.37e-14!6;CL:0000327!2.31e-11!14;CL:0000135!3.26e-11!3;CL:0000386!3.26e-11!3;CL:0000388!3.26e-11!3;CL:0000499!5.97e-11!27;CL:0000235!2.31e-08!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000153;9.54e-51;9!CL:0000447;9.54e-51;9!CL:0000138;2.40e-39;6!CL:0000327;3.07e-30;15!CL:0000499;2.59e-26;28!CL:0000235;8.72e-26;6!CL:0000135;5.92e-14;3!CL:0000388;5.92e-14;3!CL:0000214;1.20e-13;3!CL:0000151;5.53e-10;36!CL:0000182;1.32e-07;12!CL:0002540;1.81e-07;6 | ||
|ontology_enrichment_disease=DOID:5662;5.30e-11;1 | |ontology_enrichment_celltype_v019_2=CL:0000153,7.64e-51,9;CL:0000447,7.64e-51,9;CL:0000058,1.82e-39,6;CL:0000138,1.82e-39,6;CL:0000327,2.69e-30,15;CL:0000499,2.33e-26,28;CL:0000235,1.06e-25,6;CL:0000135,5.73e-14,3;CL:0000388,5.73e-14,3;CL:0000214,1.24e-13,3;CL:0000151,3.01e-12,36;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000182,1.21e-07,12;CL:0002540,1.84e-07,6;CL:0000048,7.57e-07,427 | ||
|ontology_enrichment_uberon=UBERON:0007846;5.92e-14;3!UBERON:0000043;5.92e-14;3!UBERON:0007845;5.92e-14;3!UBERON:0006915;1.20e-13;3!UBERON:0007616;1.20e-13;3!UBERON:0002217;1.20e-13;3!UBERON:0002018;1.20e-13;3!UBERON:0001282;1.27e-10;1!UBERON:0009842;1.27e-10;1!UBERON:0003704;1.27e-10;1!UBERON:0001171;1.27e-10;1!UBERON:0001172;1.27e-10;1 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;5.30e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,5.57e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!3.26e-11!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.92e-14;3!UBERON:0000043;5.92e-14;3!UBERON:0007845;5.92e-14;3!UBERON:0006915;1.20e-13;3!UBERON:0007616;1.20e-13;3!UBERON:0002217;1.20e-13;3!UBERON:0002018;1.20e-13;3!UBERON:0001282;1.27e-10;1!UBERON:0009842;1.27e-10;1!UBERON:0003704;1.27e-10;1!UBERON:0001171;1.27e-10;1!UBERON:0001172;1.27e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.73e-14,3;UBERON:0000043,5.73e-14,3;UBERON:0007845,5.73e-14,3;UBERON:0006915,1.24e-13,3;UBERON:0007616,1.24e-13,3;UBERON:0002217,1.24e-13,3;UBERON:0002018,1.24e-13,3;UBERON:0001282,1.21e-10,1;UBERON:0009842,1.21e-10,1;UBERON:0003704,1.21e-10,1;UBERON:0001171,1.21e-10,1;UBERON:0001172,1.21e-10,1;UBERON:0002384,2.34e-08,371 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,3.50936537445123,2.02785126545153,9.54343136461319,1.94653948121054,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,4.21207677250628,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.435050081742686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,5.06658324714394,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22896305723383,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70913083770502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.732761168390412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947015026375446,9.0564444630927,6.22867855117575,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23197010900051,24.4953083174652,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@CHI3L1 | |short_description=p16@CHI3L1 | ||
}} | }} |
Latest revision as of 22:09, 19 September 2015
Short description: | p16@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | -308bp_to_uc001gzl.3_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.64e-51 | 9 |
carbohydrate secreting cell | 7.64e-51 | 9 |
chondroblast | 1.82e-39 | 6 |
chondrocyte | 1.82e-39 | 6 |
extracellular matrix secreting cell | 2.69e-30 | 15 |
stromal cell | 2.33e-26 | 28 |
macrophage | 1.06e-25 | 6 |
fibrocyte | 5.73e-14 | 3 |
tendon cell | 5.73e-14 | 3 |
synovial cell | 1.24e-13 | 3 |
secretory cell | 3.01e-12 | 36 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
motile cell | 7.44e-08 | 386 |
hepatocyte | 1.21e-07 | 12 |
mesenchymal stem cell of the bone marrow | 1.84e-07 | 6 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.73e-14 | 3 |
tendon | 5.73e-14 | 3 |
regular connective tissue | 5.73e-14 | 3 |
stratified squamous epithelium | 1.24e-13 | 3 |
layer of synovial tissue | 1.24e-13 | 3 |
synovial joint | 1.24e-13 | 3 |
synovial membrane of synovial joint | 1.24e-13 | 3 |
intralobular bile duct | 1.21e-10 | 1 |
acinus | 1.21e-10 | 1 |
intrahepatic bile duct | 1.21e-10 | 1 |
portal lobule | 1.21e-10 | 1 |
hepatic acinus | 1.21e-10 | 1 |
connective tissue | 2.34e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 5.57e-11 | 1 |