FFCP PHASE1:Hg19::chr6:7911009..7911038,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:7911009..7911038,-
|short_description=p1@TXNDC5
|description=CAGE_peak_1_at_TXNDC5_5end
|association_with_transcript=2bp_to_uc003mxv.2,uc010joa.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81567 | |EntrezGene=81567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21073 | |HGNC=21073 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc003mxv.2,uc010joa.1_5end | |||
|cluster_id=chr6:7911009..7911038,- | |||
|coexpression_cluster_id=C4627 | |||
|description=CAGE_peak_1_at_TXNDC5_5end | |||
|id=chr6:7911009..7911038,- | |||
|ontology_enrichment_celltype=CL:0000222!9.58e-27!119;CL:0000055!5.89e-21!180;CL:0002139!1.49e-16!24;CL:0000115!7.56e-16!35;CL:0002078!9.79e-16!44;CL:0000220!1.45e-15!246;CL:0002321!3.73e-15!248;CL:0000680!1.67e-14!57;CL:0000056!1.67e-14!57;CL:0000355!1.67e-14!57;CL:0000187!3.52e-14!54;CL:0000183!1.52e-13!59;CL:0000359!3.56e-13!32;CL:0000192!4.10e-13!42;CL:0000514!4.10e-13!42;CL:0000071!7.36e-13!18;CL:0002546!7.36e-13!18;CL:0000213!1.14e-12!57;CL:0000215!1.14e-12!57;CL:0000393!4.11e-11!60;CL:0000211!4.11e-11!60;CL:0000057!2.15e-10!75;CL:0002371!7.96e-09!591;CL:0000548!1.11e-08!679;CL:0000004!1.11e-08!679;CL:0000255!1.11e-08!679;CL:0000012!2.58e-08!682;CL:0000144!2.86e-08!625;CL:1000413!2.58e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.49e-16;24!CL:0000115;6.34e-14;36!CL:0000071;7.31e-13;18!CL:0000359;2.27e-12;32!CL:0002078;4.63e-11;45!CL:0000192;2.61e-09;43!CL:0000213;4.82e-08;58!CL:0000215;4.82e-08;58!CL:0000187;6.26e-08;55!CL:1000413;2.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.69e-27,121;CL:0002139,1.49e-16,24;CL:0000115,2.46e-16,36;CL:0002078,3.25e-16,45;CL:0002321,2.06e-15,250;CL:0000680,3.22e-14,58;CL:0000056,3.22e-14,58;CL:0000355,3.22e-14,58;CL:0000187,6.91e-14,55;CL:0000359,3.56e-13,32;CL:0000213,4.19e-13,58;CL:0000215,4.19e-13,58;CL:0000071,7.36e-13,18;CL:0002546,7.36e-13,18;CL:0000192,8.93e-13,43;CL:0000514,8.93e-13,43;CL:0000393,6.68e-11,61;CL:0000211,6.68e-11,61;CL:0000057,7.40e-11,76;CL:1000413,2.58e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;7.31e-13;18!CL:0000514;2.61e-09;43!CL:0000355;8.94e-08;58!CL:0000222;2.49e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.88e-33!118;UBERON:0000055!1.52e-30!69;UBERON:0002049!2.88e-29!79;UBERON:0007798!2.88e-29!79;UBERON:0004872!2.30e-27!84;UBERON:0001981!1.35e-26!60;UBERON:0007500!1.35e-26!60;UBERON:0004537!1.35e-26!60;UBERON:0006965!1.35e-26!60;UBERON:0000490!2.05e-25!138;UBERON:0001009!7.69e-23!113;UBERON:0004535!8.01e-23!110;UBERON:0001637!4.64e-21!42;UBERON:0003509!4.64e-21!42;UBERON:0004572!4.64e-21!42;UBERON:0002100!9.06e-21!216;UBERON:0005256!1.46e-19!143;UBERON:0003104!8.91e-18!238;UBERON:0009142!8.91e-18!238;UBERON:0004573!8.56e-16!33;UBERON:0004571!8.56e-16!33;UBERON:0004290!2.90e-14!70;UBERON:0001134!1.96e-13!61;UBERON:0002036!1.96e-13!61;UBERON:0003082!1.96e-13!61;UBERON:0000914!2.14e-13!83;UBERON:0002329!2.14e-13!83;UBERON:0003077!2.14e-13!83;UBERON:0003059!2.14e-13!83;UBERON:0007282!2.14e-13!83;UBERON:0009618!2.14e-13!83;UBERON:0007285!2.14e-13!83;UBERON:0002385!3.35e-13!63;UBERON:0001015!3.35e-13!63;UBERON:0000383!3.35e-13!63;UBERON:0006914!5.59e-13!25;UBERON:0001986!7.36e-13!18;UBERON:0004638!7.36e-13!18;UBERON:0004852!7.36e-13!18;UBERON:0000486!8.83e-13!82;UBERON:0000487!9.90e-13!22;UBERON:0009569!1.64e-11!113;UBERON:0000926!5.14e-11!448;UBERON:0004120!5.14e-11!448;UBERON:0006603!5.14e-11!448;UBERON:0002417!6.56e-10!61;UBERON:0000916!6.56e-10!61;UBERON:0000477!7.54e-10!286;UBERON:0000947!2.45e-09!21;UBERON:0010191!2.45e-09!21;UBERON:0004111!7.11e-09!241;UBERON:0000119!5.69e-08!312;UBERON:0005172!5.83e-08!55;UBERON:0005173!5.83e-08!55;UBERON:0002107!5.93e-08!19;UBERON:0006925!5.93e-08!19;UBERON:0008836!5.93e-08!19;UBERON:0000483!6.72e-08!309;UBERON:0000481!1.61e-07!347;UBERON:0003915!2.58e-07!9;UBERON:0004700!2.58e-07!9;UBERON:0001917!2.58e-07!9;UBERON:0009856!5.62e-07!26;UBERON:0009854!8.81e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.71e-16;42!UBERON:0003509;5.71e-16;42!UBERON:0004572;5.71e-16;42!UBERON:0000055;1.82e-15;65!UBERON:0007500;4.41e-15;56!UBERON:0001981;4.41e-15;56!UBERON:0004537;4.41e-15;56!UBERON:0004573;1.49e-14;33!UBERON:0004571;1.49e-14;33!UBERON:0006914;5.44e-13;25!UBERON:0004638;7.31e-13;18!UBERON:0001986;7.31e-13;18!UBERON:0004852;7.31e-13;18!UBERON:0000487;9.84e-13;22!UBERON:0002049;2.84e-12;75!UBERON:0007798;2.84e-12;75!UBERON:0003914;4.58e-12;74!UBERON:0000490;2.14e-09;33!UBERON:0000947;2.36e-09;21!UBERON:0010191;2.36e-09;21!UBERON:0002107;6.06e-08;19!UBERON:0006925;6.06e-08;19!UBERON:0000025;1.70e-07;93!UBERON:0003915;2.58e-07;9!UBERON:0004700;2.58e-07;9!UBERON:0001917;2.58e-07;9!UBERON:0004535;5.60e-07;109 | |||
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| ||
|short_description=p1@TXNDC5 | |||
}} | }} |
Latest revision as of 21:55, 19 September 2015
Short description: | p1@TXNDC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TXNDC5_5end |
Coexpression cluster: | C4627_lymphangiectasia_Endothelial_Smooth_Renal_hepatic_Lymphatic_lymph |
Association with transcript: | 2bp_to_uc003mxv.2, uc010joa.1_5end |
EntrezGene: | TXNDC5 |
HGNC: | 21073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.69e-27 | 121 |
endothelial cell of vascular tree | 1.49e-16 | 24 |
endothelial cell | 2.46e-16 | 36 |
meso-epithelial cell | 3.25e-16 | 45 |
embryonic cell | 2.06e-15 | 250 |
muscle precursor cell | 3.22e-14 | 58 |
myoblast | 3.22e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.22e-14 | 58 |
muscle cell | 6.91e-14 | 55 |
vascular associated smooth muscle cell | 3.56e-13 | 32 |
lining cell | 4.19e-13 | 58 |
barrier cell | 4.19e-13 | 58 |
blood vessel endothelial cell | 7.36e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.36e-13 | 18 |
smooth muscle cell | 8.93e-13 | 43 |
smooth muscle myoblast | 8.93e-13 | 43 |
electrically responsive cell | 6.68e-11 | 61 |
electrically active cell | 6.68e-11 | 61 |
fibroblast | 7.40e-11 | 76 |
endothelial cell of artery | 2.58e-07 | 9 |