FFCP PHASE1:Hg19::chrX:149009998..149010009,+: Difference between revisions
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|id=chrX:149009998..149010009,+
|short_description=p2@MAGEA8
|description=CAGE_peak_2_at_MAGEA8_5end
|association_with_transcript=2bp_to_uc004fdw.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4107 | |EntrezGene=4107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6806 | |HGNC=6806 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc004fdw.1_5end | |||
|cluster_id=chrX:149009998..149010009,+ | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_2_at_MAGEA8_5end | |||
|id=chrX:149009998..149010009,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.66e-31!3;CL:0000039!1.46e-13!7;CL:0000586!1.46e-13!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.05e-50;3!CL:0000039;1.12e-21;7!CL:0000586;1.12e-21;7!CL:0000349;1.55e-08;19!CL:0000322;6.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.23e-50,3;CL:0000039,1.08e-21,7;CL:0000586,1.08e-21,7;CL:0000349,1.57e-08,19;CL:0000322,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.22e-17;1 | |||
|ontology_enrichment_disease=DOID:1799!9.57e-12!1;DOID:10165!9.57e-12!1;DOID:1798!9.57e-12!1;DOID:3095!2.45e-11!22;DOID:2994!2.45e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;4.08e-18;1!DOID:10165;4.08e-18;1!DOID:1798;4.08e-18;1!DOID:3095;2.33e-12;22!DOID:2994;2.33e-12;22!DOID:3910;9.87e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.16e-18,1;DOID:10165,3.16e-18,1;DOID:1798,3.16e-18,1;DOID:3095,2.30e-12,22;DOID:2994,2.30e-12,22;DOID:3910,1.12e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.66e-31!3;UBERON:0000920!2.66e-31!3;UBERON:0003124!1.42e-23!7;UBERON:0005631!4.96e-18!14;UBERON:0000158!4.96e-18!14;UBERON:0001282!3.28e-11!1;UBERON:0009842!3.28e-11!1;UBERON:0003704!3.28e-11!1;UBERON:0001171!3.28e-11!1;UBERON:0001172!3.28e-11!1;UBERON:0000478!1.77e-10!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.05e-50;3!UBERON:0000920;2.05e-50;3!UBERON:0005631;1.14e-15;10!UBERON:0000158;1.14e-15;10!UBERON:0000478;2.11e-11;24!UBERON:0004903;9.87e-10;2!UBERON:0002173;9.87e-10;2!UBERON:0002186;9.87e-10;2!UBERON:0004821;6.69e-07;3!UBERON:0007499;6.69e-07;3!UBERON:0003215;6.69e-07;3!UBERON:0010368;6.69e-07;3!UBERON:0009911;6.69e-07;3!UBERON:0002299;6.69e-07;3!UBERON:0006524;6.69e-07;3!UBERON:0008874;6.69e-07;3!UBERON:0002169;6.69e-07;3!UBERON:0004894;6.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.23e-50,3;UBERON:0003124,3.73e-38,7;UBERON:0005631,2.55e-19,14;UBERON:0000158,2.55e-19,14;UBERON:0000478,2.02e-11,24;UBERON:0004903,1.12e-09,2;UBERON:0002173,1.12e-09,2;UBERON:0002186,1.12e-09,2;UBERON:0004821,7.28e-07,3;UBERON:0003215,7.28e-07,3;UBERON:0010368,7.28e-07,3;UBERON:0009911,7.28e-07,3;UBERON:0002299,7.28e-07,3;UBERON:0006524,7.28e-07,3;UBERON:0008874,7.28e-07,3;UBERON:0002169,7.28e-07,3;UBERON:0004894,7.28e-07,3 | |||
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|short_description=p2@MAGEA8 | |||
}} | }} |
Latest revision as of 21:54, 19 September 2015
Short description: | p2@MAGEA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAGEA8_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 2bp_to_uc004fdw.1_5end |
EntrezGene: | MAGEA8 |
HGNC: | 6806 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.23e-50 | 3 |
germ line cell | 1.08e-21 | 7 |
germ cell | 1.08e-21 | 7 |
extraembryonic cell | 1.57e-08 | 19 |
pneumocyte | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.23e-50 | 3 |
chorion | 3.73e-38 | 7 |
extraembryonic membrane | 2.55e-19 | 14 |
membranous layer | 2.55e-19 | 14 |
extraembryonic structure | 2.02e-11 | 24 |
bronchoalveolar duct junction | 1.12e-09 | 2 |
alveolar duct | 1.12e-09 | 2 |
bronchiole | 1.12e-09 | 2 |
pulmonary alveolus epithelium | 7.28e-07 | 3 |
alveolus | 7.28e-07 | 3 |
pulmonary lobule | 7.28e-07 | 3 |
lobule | 7.28e-07 | 3 |
alveolus of lung | 7.28e-07 | 3 |
alveolar system | 7.28e-07 | 3 |
pulmonary acinus | 7.28e-07 | 3 |
alveolar sac | 7.28e-07 | 3 |
alveolar wall | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.16e-18 | 1 |
endocrine pancreas cancer | 3.16e-18 | 1 |
pancreatic endocrine carcinoma | 3.16e-18 | 1 |
germ cell and embryonal cancer | 2.30e-12 | 22 |
germ cell cancer | 2.30e-12 | 22 |
lung adenocarcinoma | 1.12e-09 | 2 |