FFCP PHASE1:Hg19::chr11:69462821..69462870,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=595 | |EntrezGene=595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1582 | |HGNC=1582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=96bp_to_ENST00000542367_5end | |association_with_transcript=96bp_to_ENST00000542367_5end | ||
|cluster_id=chr11:69462821..69462870,+ | |||
|coexpression_cluster_id=C1350 | |coexpression_cluster_id=C1350 | ||
|description=CAGE_peak_6_at_CCND1_5end | |description=CAGE_peak_6_at_CCND1_5end | ||
|id=chr11:69462821..69462870,+ | |id=chr11:69462821..69462870,+ | ||
|ontology_enrichment_celltype=CL:0000359;6.49e-18;32!CL:0000192;1.25e-10;43!CL:0002539;3.65e-08;10!CL:0002595;1.04e-07;5!CL:0002334;2.32e-07;12 | |ontology_enrichment_celltype=CL:0000055!1.40e-22!180;CL:0000220!1.23e-14!246;CL:0002321!1.55e-14!248;CL:0000359!3.11e-12!32;CL:0000192!9.01e-12!42;CL:0000514!9.01e-12!42;CL:0000057!2.04e-11!75;CL:0000222!4.51e-11!119;CL:0000680!2.79e-09!57;CL:0000056!2.79e-09!57;CL:0000355!2.79e-09!57;CL:0000066!2.35e-08!254;CL:0000183!2.46e-08!59;CL:0000187!3.90e-08!54;CL:0000548!4.43e-07!679;CL:0000004!4.43e-07!679;CL:0000255!4.43e-07!679;CL:0000393!6.73e-07!60;CL:0000211!6.73e-07!60 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;6.49e-18;32!CL:0000192;1.25e-10;43!CL:0002539;3.65e-08;10!CL:0002595;1.04e-07;5!CL:0002334;2.32e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.11e-19,32;CL:0000192,3.05e-15,43;CL:0000514,3.05e-15,43;CL:0000680,1.87e-12,58;CL:0000056,1.87e-12,58;CL:0000355,1.87e-12,58;CL:0000187,3.32e-11,55;CL:0000222,1.46e-10,121;CL:0000393,2.36e-09,61;CL:0000211,2.36e-09,61;CL:0002539,3.43e-08,10;CL:0002334,8.92e-08,12;CL:0002595,1.01e-07,5;CL:0002321,3.45e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.25e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;3.61e-18;33!UBERON:0004571;3.61e-18;33!UBERON:0001637;6.61e-16;42!UBERON:0003509;6.61e-16;42!UBERON:0004572;6.61e-16;42!UBERON:0007500;4.40e-10;56!UBERON:0001981;4.40e-10;56!UBERON:0004537;4.40e-10;56!UBERON:0000947;8.51e-10;21!UBERON:0010191;8.51e-10;21!UBERON:0004237;3.65e-08;10!UBERON:0004695;3.65e-08;10!UBERON:0002111;3.65e-08;10!UBERON:0004178;3.65e-08;10!UBERON:0000055;7.38e-08;65!UBERON:0003834;1.04e-07;5!UBERON:0001533;1.04e-07;5!UBERON:0003513;3.31e-07;7!UBERON:0002049;5.09e-07;75!UBERON:0007798;5.09e-07;75!UBERON:0003914;5.33e-07;74!UBERON:0002346;9.24e-07;4!UBERON:0000923;9.24e-07;4!UBERON:0010316;9.24e-07;4!UBERON:0005291;9.24e-07;4 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.62e-15!216;UBERON:0001637!5.87e-13!42;UBERON:0003509!5.87e-13!42;UBERON:0004572!5.87e-13!42;UBERON:0005256!8.45e-13!143;UBERON:0000055!1.50e-12!69;UBERON:0002049!2.67e-12!79;UBERON:0007798!2.67e-12!79;UBERON:0003914!2.68e-11!118;UBERON:0004573!3.23e-11!33;UBERON:0004571!3.23e-11!33;UBERON:0001981!4.05e-11!60;UBERON:0007500!4.05e-11!60;UBERON:0004537!4.05e-11!60;UBERON:0006965!4.05e-11!60;UBERON:0000486!4.10e-10!82;UBERON:0004290!4.59e-10!70;UBERON:0000475!5.10e-10!365;UBERON:0000914!8.40e-10!83;UBERON:0002329!8.40e-10!83;UBERON:0003077!8.40e-10!83;UBERON:0003059!8.40e-10!83;UBERON:0007282!8.40e-10!83;UBERON:0009618!8.40e-10!83;UBERON:0007285!8.40e-10!83;UBERON:0003104!5.56e-09!238;UBERON:0009142!5.56e-09!238;UBERON:0004872!8.99e-09!84;UBERON:0000490!9.28e-09!138;UBERON:0002385!3.21e-08!63;UBERON:0001015!3.21e-08!63;UBERON:0000383!3.21e-08!63;UBERON:0001134!3.59e-08!61;UBERON:0002036!3.59e-08!61;UBERON:0003082!3.59e-08!61;UBERON:0003102!7.86e-08!95;UBERON:0009569!1.04e-07!113;UBERON:0000468!2.17e-07!659;UBERON:0004535!5.82e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.61e-18;33!UBERON:0004571;3.61e-18;33!UBERON:0001637;6.61e-16;42!UBERON:0003509;6.61e-16;42!UBERON:0004572;6.61e-16;42!UBERON:0007500;4.40e-10;56!UBERON:0001981;4.40e-10;56!UBERON:0004537;4.40e-10;56!UBERON:0000947;8.51e-10;21!UBERON:0010191;8.51e-10;21!UBERON:0004237;3.65e-08;10!UBERON:0004695;3.65e-08;10!UBERON:0002111;3.65e-08;10!UBERON:0004178;3.65e-08;10!UBERON:0000055;7.38e-08;65!UBERON:0003834;1.04e-07;5!UBERON:0001533;1.04e-07;5!UBERON:0003513;3.31e-07;7!UBERON:0002049;5.09e-07;75!UBERON:0007798;5.09e-07;75!UBERON:0003914;5.33e-07;74!UBERON:0002346;9.24e-07;4!UBERON:0000923;9.24e-07;4!UBERON:0010316;9.24e-07;4!UBERON:0005291;9.24e-07;4 | |||
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| ||
|short_description=p6@CCND1 | |short_description=p6@CCND1 | ||
}} | }} |
Latest revision as of 21:28, 19 September 2015
Short description: | p6@CCND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CCND1_5end |
Coexpression cluster: | C1350_neuroectodermal_neuroblastoma_Melanocyte_Smooth_leiomyoma_hepatoma_mesenchymal |
Association with transcript: | 96bp_to_ENST00000542367_5end |
EntrezGene: | CCND1 |
HGNC: | 1582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.11e-19 | 32 |
smooth muscle cell | 3.05e-15 | 43 |
smooth muscle myoblast | 3.05e-15 | 43 |
muscle precursor cell | 1.87e-12 | 58 |
myoblast | 1.87e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-12 | 58 |
muscle cell | 3.32e-11 | 55 |
mesodermal cell | 1.46e-10 | 121 |
electrically responsive cell | 2.36e-09 | 61 |
electrically active cell | 2.36e-09 | 61 |
aortic smooth muscle cell | 3.43e-08 | 10 |
preadipocyte | 8.92e-08 | 12 |
smooth muscle cell of the subclavian artery | 1.01e-07 | 5 |
embryonic cell | 3.45e-07 | 250 |