FFCP PHASE1:Hg19::chr18:53255415..53255491,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:53255415..53255491,- to FFCP PHASE1:Hg19::chr18:53255415..53255491,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=P15884,B3KVA4,G0LNT9,G0LNU0 | |UniProt=P15884,B3KVA4,G0LNT9,G0LNU0 | ||
|association_with_transcript=368bp_to_ENST00000354452,ENST00000356073,NM_001083962,NM_003199,uc002lfz.2,uc010dph.1_5end | |||
|cluster_id=chr18:53255415..53255491,- | |||
|description=CAGE_peak_1_at_TCF4_5end | |||
|id=chr18:53255415..53255491,- | |||
|ontology_enrichment_celltype=CL:0002139!2.61e-10!24;CL:0000115!6.59e-10!35;CL:0000055!1.11e-08!180;CL:0000071!1.15e-07!18;CL:0002546!1.15e-07!18;CL:0002078!3.40e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.11e-10;24!CL:0000115;1.52e-08;36!CL:0000071;9.98e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.38e-10,24;CL:0000115,7.14e-10,36;CL:0000071,1.08e-07,18;CL:0002546,1.08e-07,18;CL:0002078,5.36e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;9.98e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.23e-22!94;UBERON:0001016!1.23e-22!94;UBERON:0001017!3.94e-22!82;UBERON:0005743!2.23e-20!86;UBERON:0001049!2.17e-17!57;UBERON:0005068!2.17e-17!57;UBERON:0006241!2.17e-17!57;UBERON:0007135!2.17e-17!57;UBERON:0000955!4.71e-17!69;UBERON:0006238!4.71e-17!69;UBERON:0002616!3.02e-16!59;UBERON:0007023!1.56e-14!115;UBERON:0003080!1.68e-13!42;UBERON:0002780!2.96e-13!41;UBERON:0001890!2.96e-13!41;UBERON:0006240!2.96e-13!41;UBERON:0002346!1.43e-12!90;UBERON:0000025!1.47e-12!194;UBERON:0003075!1.74e-12!86;UBERON:0007284!1.74e-12!86;UBERON:0002020!1.75e-12!34;UBERON:0003528!1.75e-12!34;UBERON:0001893!2.05e-12!34;UBERON:0002791!4.16e-12!33;UBERON:0001869!1.36e-11!32;UBERON:0004111!1.79e-11!241;UBERON:0000055!5.84e-11!69;UBERON:0002049!6.28e-11!79;UBERON:0007798!6.28e-11!79;UBERON:0000924!1.03e-10!173;UBERON:0006601!1.03e-10!173;UBERON:0004121!1.64e-10!169;UBERON:0004872!2.59e-10!84;UBERON:0001009!1.52e-09!113;UBERON:0000956!1.55e-09!25;UBERON:0000203!1.55e-09!25;UBERON:0004535!2.03e-09!110;UBERON:0001981!2.60e-09!60;UBERON:0007500!2.60e-09!60;UBERON:0004537!2.60e-09!60;UBERON:0006965!2.60e-09!60;UBERON:0000477!4.72e-09!286;UBERON:0000468!1.20e-08!659;UBERON:0003056!1.21e-08!61;UBERON:0000033!2.03e-08!123;UBERON:0002619!2.24e-08!22;UBERON:0000153!2.62e-08!129;UBERON:0007811!2.62e-08!129;UBERON:0001986!1.15e-07!18;UBERON:0004638!1.15e-07!18;UBERON:0004852!1.15e-07!18;UBERON:0001950!1.27e-07!20;UBERON:0000483!1.32e-07!309;UBERON:0000119!1.77e-07!312;UBERON:0000479!4.68e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.09e-11;34!UBERON:0002020;7.09e-11;34!UBERON:0002791;9.91e-11;32!UBERON:0001893;1.27e-10;34!UBERON:0001869;1.34e-10;32!UBERON:0002780;3.79e-10;41!UBERON:0001890;3.79e-10;41!UBERON:0000073;4.27e-10;53!UBERON:0002616;4.27e-10;53!UBERON:0000956;1.61e-09;25!UBERON:0000203;1.61e-09;25!UBERON:0001016;3.73e-09;83!UBERON:0001017;9.89e-09;75!UBERON:0002619;2.31e-08;22!UBERON:0000955;3.73e-08;68!UBERON:0004638;9.98e-08;18!UBERON:0001986;9.98e-08;18!UBERON:0004852;9.98e-08;18!UBERON:0001950;1.29e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.18e-24,89;UBERON:0001017,5.92e-22,81;UBERON:0001049,3.32e-17,56;UBERON:0005068,3.32e-17,56;UBERON:0006241,3.32e-17,56;UBERON:0007135,3.32e-17,56;UBERON:0000955,7.29e-17,68;UBERON:0006238,7.29e-17,68;UBERON:0000073,2.73e-16,53;UBERON:0002616,2.73e-16,53;UBERON:0007023,3.76e-14,114;UBERON:0002346,9.45e-14,86;UBERON:0003075,1.07e-13,82;UBERON:0007284,1.07e-13,82;UBERON:0002780,2.62e-13,41;UBERON:0001890,2.62e-13,41;UBERON:0003080,2.62e-13,41;UBERON:0006240,2.62e-13,41;UBERON:0003528,1.56e-12,34;UBERON:0002020,1.56e-12,34;UBERON:0000025,1.82e-12,192;UBERON:0001893,1.82e-12,34;UBERON:0010314,6.97e-12,132;UBERON:0002791,8.76e-12,32;UBERON:0001869,1.22e-11,32;UBERON:0004111,3.53e-11,240;UBERON:0004121,4.56e-11,171;UBERON:0000924,4.56e-11,171;UBERON:0006601,4.56e-11,171;UBERON:0000479,1.04e-10,773;UBERON:0000055,1.48e-10,68;UBERON:0002049,1.53e-10,78;UBERON:0007798,1.53e-10,78;UBERON:0004872,6.09e-10,83;UBERON:0000956,1.42e-09,25;UBERON:0000203,1.42e-09,25;UBERON:0001009,3.33e-09,112;UBERON:0004535,4.46e-09,109;UBERON:0010371,4.82e-09,104;UBERON:0007500,6.54e-09,59;UBERON:0001981,6.54e-09,59;UBERON:0004537,6.54e-09,59;UBERON:0006965,6.54e-09,59;UBERON:0003056,9.09e-09,61;UBERON:0002619,2.09e-08,22;UBERON:0000483,6.76e-08,306;UBERON:0000119,9.21e-08,309;UBERON:0004638,1.08e-07,18;UBERON:0001986,1.08e-07,18;UBERON:0004852,1.08e-07,18;UBERON:0001950,1.19e-07,20;UBERON:0011216,5.32e-07,223 | |||
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| ||
|short_description=p1@TCF4 | |||
}} | }} |
Latest revision as of 21:23, 19 September 2015
Short description: | p1@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 368bp_to_ENST00000354452, ENST00000356073, NM_001083962, NM_003199, uc002lfz.2, uc010dph.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | P15884B3KVA4G0LNT9G0LNU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.38e-10 | 24 |
endothelial cell | 7.14e-10 | 36 |
blood vessel endothelial cell | 1.08e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.08e-07 | 18 |
meso-epithelial cell | 5.36e-07 | 45 |