FFCP PHASE1:Hg19::chr6:111997744..111997769,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2534 | |EntrezGene=2534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4037 | |HGNC=4037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000491885_5end | |association_with_transcript=0bp_to_ENST00000491885_5end | ||
|cluster_id=chr6:111997744..111997769,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_11_at_FYN_5end | |description=CAGE_peak_11_at_FYN_5end | ||
|id=chr6:111997744..111997769,- | |id=chr6:111997744..111997769,- | ||
|ontology_enrichment_celltype=CL:0000182;1.60e-08;12 | |ontology_enrichment_celltype=CL:0000181!4.38e-15!12;CL:0000417!4.38e-15!12;CL:0000668!4.38e-15!12;CL:0000414!4.38e-15!12;CL:0000412!4.38e-15!12;CL:0000182!4.38e-15!12;CL:0000223!7.11e-07!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.60e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.48e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.53e-12;1!UBERON:0004161;3.07e-09;11!UBERON:0003104;2.32e-08;31!UBERON:0009497;6.79e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002108;1.92e-19;4!UBERON:0002423;7.41e-15;25!UBERON:0000160;2.00e-14;17!UBERON:0002107;8.03e-14;19!UBERON:0006925;8.03e-14;19!UBERON:0001301;8.19e-12;1!UBERON:0005409;2.83e-11;22!UBERON:0002365;1.97e-08;31!UBERON:0002330;1.97e-08;31!UBERON:0005172;3.03e-08;52!UBERON:0005173;3.03e-08;52!UBERON:0001007;5.99e-08;81!UBERON:0002368;2.48e-07;33 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.87e-15!19;UBERON:0006925!2.87e-15!19;UBERON:0008836!2.87e-15!19;UBERON:0009497!5.77e-14!25;UBERON:0000015!5.77e-14!25;UBERON:0002423!5.77e-14!25;UBERON:0006235!5.77e-14!25;UBERON:0004161!5.77e-14!25;UBERON:0008835!5.92e-13!22;UBERON:0003894!5.92e-13!22;UBERON:0009854!2.56e-12!23;UBERON:0007499!3.38e-11!25;UBERON:0005057!1.06e-10!26;UBERON:0009856!1.06e-10!26;UBERON:0003929!1.71e-09!54;UBERON:0005172!2.33e-09!55;UBERON:0005173!2.33e-09!55;UBERON:0002368!2.77e-09!35;UBERON:0002365!1.04e-08!31;UBERON:0002330!1.04e-08!31;UBERON:0000949!3.27e-08!45;UBERON:0004921!3.29e-08!129;UBERON:0004185!3.29e-08!129;UBERON:0002417!3.66e-08!61;UBERON:0000916!3.66e-08!61;UBERON:0000160!8.18e-08!27;UBERON:0005911!2.21e-07!82;UBERON:0005409!2.95e-07!35;UBERON:0001007!6.79e-07!155;UBERON:0001555!6.79e-07!155;UBERON:0007026!6.79e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.92e-19;4!UBERON:0002423;7.41e-15;25!UBERON:0000160;2.00e-14;17!UBERON:0002107;8.03e-14;19!UBERON:0006925;8.03e-14;19!UBERON:0001301;8.19e-12;1!UBERON:0005409;2.83e-11;22!UBERON:0002365;1.97e-08;31!UBERON:0002330;1.97e-08;31!UBERON:0005172;3.03e-08;52!UBERON:0005173;3.03e-08;52!UBERON:0001007;5.99e-08;81!UBERON:0002368;2.48e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.80e-19,4;UBERON:0009497,7.05e-15,25;UBERON:0000015,7.05e-15,25;UBERON:0002423,7.05e-15,25;UBERON:0006235,7.05e-15,25;UBERON:0004161,7.05e-15,25;UBERON:0005172,1.33e-14,54;UBERON:0005173,1.33e-14,54;UBERON:0000160,1.92e-14,17;UBERON:0002107,7.61e-14,19;UBERON:0006925,7.61e-14,19;UBERON:0008836,7.61e-14,19;UBERON:0002417,4.99e-13,60;UBERON:0000916,4.99e-13,60;UBERON:0008835,6.03e-12,22;UBERON:0003894,6.03e-12,22;UBERON:0001301,9.61e-12,1;UBERON:0009854,2.01e-11,23;UBERON:0007499,1.68e-10,25;UBERON:0009856,4.31e-10,26;UBERON:0005409,5.65e-10,25;UBERON:0003929,6.66e-09,54;UBERON:0002365,1.92e-08,31;UBERON:0002330,1.92e-08,31;UBERON:0002368,1.84e-07,35;UBERON:0004921,1.94e-07,118;UBERON:0005177,2.91e-07,101;UBERON:0001007,4.03e-07,145;UBERON:0001555,4.03e-07,145;UBERON:0007026,4.03e-07,145 | |||
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| ||
|short_description=p11@FYN | |short_description=p11@FYN | ||
}} | }} |
Latest revision as of 21:13, 19 September 2015
Short description: | p11@FYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FYN_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000491885_5end |
EntrezGene: | FYN |
HGNC: | 4037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.48e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.80e-19 | 4 |
epithelium of foregut-midgut junction | 7.05e-15 | 25 |
anatomical boundary | 7.05e-15 | 25 |
hepatobiliary system | 7.05e-15 | 25 |
foregut-midgut junction | 7.05e-15 | 25 |
septum transversum | 7.05e-15 | 25 |
abdomen element | 1.33e-14 | 54 |
abdominal segment element | 1.33e-14 | 54 |
intestine | 1.92e-14 | 17 |
liver | 7.61e-14 | 19 |
digestive gland | 7.61e-14 | 19 |
liver bud | 7.61e-14 | 19 |
abdominal segment of trunk | 4.99e-13 | 60 |
abdomen | 4.99e-13 | 60 |
hepatic diverticulum | 6.03e-12 | 22 |
liver primordium | 6.03e-12 | 22 |
epididymis | 9.61e-12 | 1 |
digestive tract diverticulum | 2.01e-11 | 23 |
epithelial sac | 1.68e-10 | 25 |
sac | 4.31e-10 | 26 |
gastrointestinal system | 5.65e-10 | 25 |
gut epithelium | 6.66e-09 | 54 |
exocrine gland | 1.92e-08 | 31 |
exocrine system | 1.92e-08 | 31 |
endocrine gland | 1.84e-07 | 35 |
subdivision of digestive tract | 1.94e-07 | 118 |
trunk region element | 2.91e-07 | 101 |
digestive system | 4.03e-07 | 145 |
digestive tract | 4.03e-07 | 145 |
primitive gut | 4.03e-07 | 145 |