FFCP PHASE1:Hg19::chr5:115910716..115910730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57556 | |EntrezGene=57556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10738 | |HGNC=10738 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2E6 | |UniProt=Q9H2E6 | ||
|association_with_transcript=-86bp_to_ENST00000343348_5end | |association_with_transcript=-86bp_to_ENST00000343348_5end | ||
|cluster_id=chr5:115910716..115910730,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_5_at_SEMA6A_5end | |description=CAGE_peak_5_at_SEMA6A_5end | ||
|id=chr5:115910716..115910730,- | |id=chr5:115910716..115910730,- | ||
|ontology_enrichment_celltype=CL:0000148!1.48e-11!10;CL:0000541!1.48e-11!10;CL:0000047!6.83e-09!8;CL:0000147!3.13e-07!14;CL:0002322!4.42e-07!5;CL:0000540!7.43e-07!6;CL:0000031!7.43e-07!6;CL:0000404!7.43e-07!6 | |ontology_enrichment_celltype=CL:0000148!1.48e-11!10;CL:0000541!1.48e-11!10;CL:0000047!6.83e-09!8;CL:0000147!3.13e-07!14;CL:0002322!4.42e-07!5;CL:0000540!7.43e-07!6;CL:0000031!7.43e-07!6;CL:0000404!7.43e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.87e-26;10!CL:0000147;5.30e-18;14!CL:0002322;2.65e-15;5!CL:0000710;6.46e-12;20!CL:0000075;4.55e-10;27!CL:0002567;1.26e-08;3!CL:0000540;6.50e-08;6!CL:0000404;6.50e-08;6!CL:0002077;6.30e-07;34!CL:0000047;9.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.93e-26,10;CL:0000541,1.93e-26,10;CL:0000147,3.27e-18,14;CL:0002322,2.67e-15,5;CL:0000047,1.81e-12,8;CL:0000710,4.68e-12,20;CL:0000133,2.21e-11,59;CL:0000075,3.57e-10,27;CL:0002567,8.84e-09,3;CL:0000221,1.53e-08,72;CL:0000540,7.31e-08,6;CL:0000031,7.31e-08,6;CL:0000404,7.31e-08,6;CL:0000333,1.05e-07,41;CL:0002077,2.01e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.60e-13;10!UBERON:0005564;6.60e-13;10!CL:0000031;6.50e-08;6!CL:0000133;3.63e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!4.76e-07!22;DOID:2994!4.76e-07!22 | |ontology_enrichment_disease=DOID:3095!4.76e-07!22;DOID:2994!4.76e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-28!115;UBERON:0001049!5.80e-19!57;UBERON:0005068!5.80e-19!57;UBERON:0006241!5.80e-19!57;UBERON:0007135!5.80e-19!57;UBERON:0001017!8.15e-19!82;UBERON:0005743!3.74e-18!86;UBERON:0000073!5.19e-17!94;UBERON:0001016!5.19e-17!94;UBERON:0002616!2.04e-14!59;UBERON:0002346!3.39e-14!90;UBERON:0003075!1.42e-13!86;UBERON:0007284!1.42e-13!86;UBERON:0003080!6.50e-13!42;UBERON:0001893!1.55e-12!34;UBERON:0002780!3.20e-12!41;UBERON:0001890!3.20e-12!41;UBERON:0006240!3.20e-12!41;UBERON:0002020!3.98e-12!34;UBERON:0003528!3.98e-12!34;UBERON:0002791!4.71e-12!33;UBERON:0000955!8.71e-12!69;UBERON:0006238!8.71e-12!69;UBERON:0001869!2.31e-11!32;UBERON:0000924!2.66e-11!173;UBERON:0006601!2.66e-11!173;UBERON:0004121!9.94e-11!169;UBERON:0003056!1.67e-09!61;UBERON:0000956!5.72e-09!25;UBERON:0000203!5.72e-09!25;UBERON:0000153!1.95e-08!129;UBERON:0007811!1.95e-08!129;UBERON:0000033!1.30e-07!123;UBERON:0003076!1.79e-07!15;UBERON:0003057!1.79e-07!15;UBERON:0004111!3.07e-07!241;UBERON:0002619!5.59e-07!22;UBERON:0000025!5.92e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!1.05e-28!115;UBERON:0001049!5.80e-19!57;UBERON:0005068!5.80e-19!57;UBERON:0006241!5.80e-19!57;UBERON:0007135!5.80e-19!57;UBERON:0001017!8.15e-19!82;UBERON:0005743!3.74e-18!86;UBERON:0000073!5.19e-17!94;UBERON:0001016!5.19e-17!94;UBERON:0002616!2.04e-14!59;UBERON:0002346!3.39e-14!90;UBERON:0003075!1.42e-13!86;UBERON:0007284!1.42e-13!86;UBERON:0003080!6.50e-13!42;UBERON:0001893!1.55e-12!34;UBERON:0002780!3.20e-12!41;UBERON:0001890!3.20e-12!41;UBERON:0006240!3.20e-12!41;UBERON:0002020!3.98e-12!34;UBERON:0003528!3.98e-12!34;UBERON:0002791!4.71e-12!33;UBERON:0000955!8.71e-12!69;UBERON:0006238!8.71e-12!69;UBERON:0001869!2.31e-11!32;UBERON:0000924!2.66e-11!173;UBERON:0006601!2.66e-11!173;UBERON:0004121!9.94e-11!169;UBERON:0003056!1.67e-09!61;UBERON:0000956!5.72e-09!25;UBERON:0000203!5.72e-09!25;UBERON:0000153!1.95e-08!129;UBERON:0007811!1.95e-08!129;UBERON:0000033!1.30e-07!123;UBERON:0003076!1.79e-07!15;UBERON:0003057!1.79e-07!15;UBERON:0004111!3.07e-07!241;UBERON:0002619!5.59e-07!22;UBERON:0000025!5.92e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.81e-12;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,4.86601178122796,1.64249310087461,0.627713197974014,0.993374274723366,0.656804715599566,1.10195093839151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.850813354476611,0,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,105.62922950823,51.0239608037718,59.6074926920629,66.9650415399293,65.0987795259121,15.3290490811849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,2.36315962672562,0,2.7057456479485,0,0.109750285408626,0,0,0,0,0,0,3.13012093432707,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,46.3103443622187,0.704387472105808,0,0,0.25248486685276,6.73077679496992,5.72982638337417,5.86087236050235,1.71072446022705,1.64523988325318,7.20823338825402,3.71574362419752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,18.2948129440174,7.8083912314573,0.773288812777695,2.01019518401218,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,0,0,0,0,0.451199612907412,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,1.854738209659,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,1.06838442776085,0,0.192190067365106,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0.179021174675609,0,0.394573622547734,0,0,0.969332746095218,0.463840490809256,0,0,0,1.44999915086959,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0.694499979733169,0.885741385813839,0.361789315876224,1.52581736317083,0.884634079449797,0.591095237907095,0,0,0,0.615602068030377,0,2.3056390438806,0.179515288819544,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,0.282706142867882,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0.104421949505455,1.28062152663286,0,0,0,0,0,0,0,1.53036380815245,0.442306057399416,0.300646838828985,0.933193722575224,0,0,0,0,0,0,0.173559738335131,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,2.48578814858586,0,0,0.886351143382302,0,0,1.28071796843612,0,0,0,12.6980298417854,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.558564802544508,0.458320848023367,0,0,0.429226048136571,0.223171457441873,1.00775208730089,0,1.16495949527454,0.315132729228895,0.0824158583811665,0.26961417541674,0.590564889088493,0,0.795229689809303,0.681017030557878,36.0087052561643,28.1955845024329,30.7425850141597,0,0.77380195455795,0.789744236554321,0,0.472834243795189,2.04572893726493,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0.517131825446202,0.13223260174269,0,0,1.49502377594773,2.51526888159466,2.07119527673598,0.496166021811951,0,0,0,0,0.5013797880454,0.919036730290385,0.327872630709804,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.110929051536852,1.36612086471044,0,0,0.758245587708239,1.7127920012698,0,0.936669811613763,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.1997285948143,0,0,0.276516872303462,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0.323474434190045,0.314531883711793,0.54604819096007,0.33946505990805,0.212574920101683,0,0,0,0,0,0,0.6124909547064,0.706521476061055,0,0.478901577171454,0.41023272848151,1.26035848110859,1.10651603942749,0.484426936895553,0,0,0,0,0,0,0,0,2.25630985047772,0,1.56302802246618,0.785720083444267,0,0,0.472763092328763,0,0.413373593002368,0.760989722326882,0,0.548257766857182,0,0.175871244359621,0,35.3563211679669,2.01770233331294,0,0,4.25771376780666,0.230467975111559,0,1.56330385846713,0.591954962065642,0,0,0.39246546425257,0.314231179832004,0.280272163313789,2.73947616152849,2.37520350340484,0,1.21510125100316,0,0,0.869291361512897,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0.955538938977433,8.83657911202559,0,1.21917924982269,0,0.410651227424988,1.1598144313382,0.971421986118279,0,0.397901550322736,0.118920090777569,14.231206336909,0,0,0.771741581079447,1.09279780251979,0,0,0,0.588925401344836,0.891139200981258,3.3812458206672,0,0.375935671919414,0.837952543656503,0,0,0,0.160482733378337,0.730336388246517,0.917458566809082,0.43001874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| ||
|short_description=p5@SEMA6A | |short_description=p5@SEMA6A | ||
}} | }} |
Latest revision as of 20:52, 19 September 2015
Short description: | p5@SEMA6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEMA6A_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -86bp_to_ENST00000343348_5end |
EntrezGene: | SEMA6A |
HGNC: | 10738 |
UniProt: | Q9H2E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.93e-26 | 10 |
melanoblast | 1.93e-26 | 10 |
pigment cell | 3.27e-18 | 14 |
embryonic stem cell | 2.67e-15 | 5 |
neuronal stem cell | 1.81e-12 | 8 |
neurecto-epithelial cell | 4.68e-12 | 20 |
neurectodermal cell | 2.21e-11 | 59 |
columnar/cuboidal epithelial cell | 3.57e-10 | 27 |
light melanocyte | 8.84e-09 | 3 |
ectodermal cell | 1.53e-08 | 72 |
neuron | 7.31e-08 | 6 |
neuroblast | 7.31e-08 | 6 |
electrically signaling cell | 7.31e-08 | 6 |
migratory neural crest cell | 1.05e-07 | 41 |
ecto-epithelial cell | 2.01e-07 | 34 |