FFCP PHASE1:Hg19::chr10:90750948..90750976,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |||
|TSSclassifier=strong | |||
|UniProt=F6UVQ4 | |||
|association_with_transcript=68bp_to_ENST00000458159_5end | |||
|cluster_id=chr10:90750948..90750976,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_6_at_ACTA2_5end | |||
|id=chr10:90750948..90750976,- | |||
|ontology_enrichment_celltype=CL:0000055!1.60e-25!180;CL:0000183!2.13e-16!59;CL:0000393!9.93e-15!60;CL:0000211!9.93e-15!60;CL:0000680!1.26e-14!57;CL:0000056!1.26e-14!57;CL:0000355!1.26e-14!57;CL:0000187!1.56e-14!54;CL:0000057!1.30e-12!75;CL:0000222!3.08e-12!119;CL:0000192!5.31e-12!42;CL:0000514!5.31e-12!42;CL:0002371!1.25e-11!591;CL:0002321!2.34e-10!248;CL:0000220!2.76e-10!246;CL:0000144!8.01e-10!625;CL:0000359!1.53e-07!32;CL:0000548!5.45e-07!679;CL:0000004!5.45e-07!679;CL:0000255!5.45e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000187;9.33e-11;55!CL:0000192;1.59e-10;43!CL:0000393;3.13e-08;61!CL:0000211;3.13e-08;61!CL:0000359;1.14e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,5.77e-18,55;CL:0000680,1.72e-16,58;CL:0000056,1.72e-16,58;CL:0000355,1.72e-16,58;CL:0000393,3.13e-16,61;CL:0000211,3.13e-16,61;CL:0000192,6.77e-15,43;CL:0000514,6.77e-15,43;CL:0000222,5.73e-10,121;CL:0000048,4.90e-09,427;CL:0000723,1.49e-08,433;CL:0000034,2.31e-08,441;CL:0000057,4.63e-08,76;CL:0000359,1.87e-07,32;CL:0002321,4.57e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.59e-10;43!CL:0000355;8.65e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.91e-14!70;UBERON:0000486!1.17e-13!82;UBERON:0001134!4.15e-13!61;UBERON:0002036!4.15e-13!61;UBERON:0003082!4.15e-13!61;UBERON:0002049!1.78e-12!79;UBERON:0007798!1.78e-12!79;UBERON:0004535!2.06e-12!110;UBERON:0002385!2.07e-12!63;UBERON:0001015!2.07e-12!63;UBERON:0000383!2.07e-12!63;UBERON:0001009!1.03e-11!113;UBERON:0004872!2.73e-11!84;UBERON:0000914!1.05e-10!83;UBERON:0002329!1.05e-10!83;UBERON:0003077!1.05e-10!83;UBERON:0003059!1.05e-10!83;UBERON:0007282!1.05e-10!83;UBERON:0009618!1.05e-10!83;UBERON:0007285!1.05e-10!83;UBERON:0003914!2.43e-10!118;UBERON:0005256!2.63e-10!143;UBERON:0000490!4.15e-10!138;UBERON:0000119!3.73e-09!312;UBERON:0000055!8.21e-09!69;UBERON:0000483!1.09e-08!309;UBERON:0001981!8.80e-08!60;UBERON:0007500!8.80e-08!60;UBERON:0004537!8.80e-08!60;UBERON:0006965!8.80e-08!60;UBERON:0001637!1.11e-07!42;UBERON:0003509!1.11e-07!42;UBERON:0004572!1.11e-07!42;UBERON:0002100!3.19e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;3.01e-07;15!UBERON:0001801;4.14e-07;14!UBERON:0001637;8.75e-07;42!UBERON:0003509;8.75e-07;42!UBERON:0004572;8.75e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.12e-18,78;UBERON:0002329,9.23e-16,71;UBERON:0003059,9.23e-16,71;UBERON:0007282,9.23e-16,71;UBERON:0004290,9.23e-16,71;UBERON:0009618,9.23e-16,71;UBERON:0003077,2.20e-15,72;UBERON:0007285,2.20e-15,72;UBERON:0007524,5.12e-15,73;UBERON:0001134,9.27e-15,62;UBERON:0002036,9.27e-15,62;UBERON:0003082,9.27e-15,62;UBERON:0000486,1.47e-14,83;UBERON:0002385,5.56e-14,64;UBERON:0001015,5.56e-14,64;UBERON:0000383,5.56e-14,64;UBERON:0005256,1.72e-13,122;UBERON:0004535,5.12e-12,109;UBERON:0001009,2.33e-11,112;UBERON:0003104,3.56e-11,160;UBERON:0009142,3.56e-11,160;UBERON:0000490,8.32e-11,148;UBERON:0002049,9.41e-10,78;UBERON:0007798,9.41e-10,78;UBERON:0001637,1.28e-08,42;UBERON:0003509,1.28e-08,42;UBERON:0004572,1.28e-08,42;UBERON:0003914,1.84e-08,117;UBERON:0000119,2.06e-08,309;UBERON:0000483,2.80e-08,306;UBERON:0004872,1.06e-07,83;UBERON:0001135,2.91e-07,15;UBERON:0001801,4.10e-07,14;UBERON:0002100,4.57e-07,199;UBERON:0004573,9.77e-07,33;UBERON:0004571,9.77e-07,33 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0.893922188854576,0,5.06599756336621,2.52687949370732,0,0.737201809504527,0,0.218441372130172,0,0.123766352960047,0,3.36162573225888,3.61616716814386,1.46062018077475,1.46379839637152,1.47745269692145,2.24400760368678,0.626909442956176,0.85870796139317,0.410623275218653,0.251085279189606,0.764134057479513,0.57470412614962,0.708397031823113,0,0,0,0,0,1.10926203050036,0.0774672005803016,0.284338464974843,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.384273959177026,0,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,4.02420515822182,2.81297636055767,0.361439152384566,0,0,0,0,1.51255707462509,1.33037638477538,3.07421749925941,0.196468613246569,1.45718115317017,0.741568885568859,0.324547393654683,0.522389211897802,0.26591592103773,0,0,0,0.198762407366705,0,1.04142150482278,0.56530794192401,1.25849830862972,1.37559020970034,0.417989933073621,1.29208379584664,0.71153252537342,0.33472061276467,0.402829317109147,0,0.24406205754817,1.10298924103761,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0.949265659568129,0.366403487860815,0,0,0,0.993943903390637,0.759783069987479,0.132409180813219,1.14734648299525,1.06400514659507,0.560677600142307,5.33744978648525,0.24666754841716,0.622422070799533,1.48181739276657,2.12500474047496,0.302714855289863,1.15235184896,2.57753575017176,0.624320153660641,1.71141546463335,2.54062756938062,1.05691048779388,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.516628905878827,1.18800285728205,0.741800787835671,7.28129089550421,7.90479955997862,0,0.375355559615893,0,0.438977620880838,0,0.150238058906597,2.26864366320042,1.07633781413317,1.2813443329114,0.847727604638247,2.10063767259082,1.64884046781502,0.515281080091258,0.18611685633159,0,0.487185025805993,0.252433774244115,0.276149695926898,1.61646056818812,0.355009592516614,1.0075209822764,0.67824236924195,0.193260853163297,0.545492241181669,0,0.121973706129595,0.265059536642971,0.116193942869518,1.86589899027667,0,0,0,2.57296375277154,0,0.928735856063958,1.44375896333917,0,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,3.7041661019826,4.41026134156626,0,0,0,0,0,1.3725424823882,0.219500570817251,0,0.301586917234893,0.370353780634118,1.3032332212413,6.23960871167747,1.44331342025273,0.34779121492523,1.40890433082986,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0,0.850650583454319,0.358234090811393,0.871901815541886,1.53353071666084,0,0,0,0,0,0,0.763976851116555,0,3.4214489204541,0.102827492703324,1.20137223137567,2.28661146104463,0.672786506072164,1.30788020649984,0.2933531432838,0.517086863031111,0,1.690605505112,1.32969058292435,0,0.257207374262142,0,0.799266537048298,0.428933980974443,1.08524321078289,1.64648067356154,3.58309802723109,0,3.16780749173372,0.602878754119172,0,0.599837947092342,0,0.502257091432126,0,0,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,0.49076596687656,0,0.271265023699736,0.207970861530807,0,0.473107245101804,0.117141414992713,1.20378439891088,2.27407504055985,1.03473071292505,0,0.737476674166813,2.5196248195744,0.783204629850962,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,0.496215615637554,0.920771839728375,0,0.384417447767103,0,0.804269605718038,1.48418066444991,3.39261326365842,7.99027763909072,1.56041596426237,0.519254429183621,1.62694529843943,0,0.200506470303285,0.0920809889358963,0.803701137152247,2.54927635209404,3.93373244878272,0,0.770153371044148,0,2.92278449306521,0.422206515571503,4.54933536283586,1.36074964221213,0.431831832204279,1.54227252690289,1.08378575017541,2.50844886927427,0.254876273045038,0,0.223874754722178,0,0,1.02580050046556,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.580024309752732,1.23238893691716,1.07452572308291,0.551346289938122,1.28904293841928,0.435050081742686,1.70453254832202,2.31483292681517,0.165284915360978,0.960950336825531,0.765676274967505,0.10115778085555,0.464845549297286,0.31481234683064,2.0911118104818,2.15623506123262,2.12922412126809,0,0.37064843820784,0.143124886741991,1.116475108079,0.632758849437452,1.14378116354295,3.83846686967001,1.71175595213568,0.95460974377781,2.35484592059769,1.2591072030832,1.37268514868027,2.94531005864216,1.61745985258653,1.58510321173008,0,4.8763373908959,2.19342140668156,1.05650146756755,1.22849920267187,1.83827061539827,0,1.10273068709225,0.66343897524122,0,4.6302042741335,1.31178950409327,1.62328301570163,0.6196469961995,1.97186921772569,0.717056761020258,0.392996164052485,0,0.354761064070598,0.422215270595328,0.658589785919804,0.379473173765715,1.04980416073495,0.288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| |||
|short_description=p6@ACTA2 | |||
}} |
Latest revision as of 20:47, 19 September 2015
Short description: | p6@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ACTA2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 68bp_to_ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 5.77e-18 | 55 |
muscle precursor cell | 1.72e-16 | 58 |
myoblast | 1.72e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-16 | 58 |
electrically responsive cell | 3.13e-16 | 61 |
electrically active cell | 3.13e-16 | 61 |
smooth muscle cell | 6.77e-15 | 43 |
smooth muscle myoblast | 6.77e-15 | 43 |
mesodermal cell | 5.73e-10 | 121 |
multi fate stem cell | 4.90e-09 | 427 |
somatic stem cell | 1.49e-08 | 433 |
stem cell | 2.31e-08 | 441 |
fibroblast | 4.63e-08 | 76 |
vascular associated smooth muscle cell | 1.87e-07 | 32 |
embryonic cell | 4.57e-07 | 250 |