FFCP PHASE1:Hg19::chr10:90750896..90750925,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59 | |EntrezGene=59 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |HGNC=130 | ||
|TSSclassifier=strong | |||
|UniProt=F6UVQ4 | |UniProt=F6UVQ4 | ||
|association_with_transcript=119bp_to_ENST00000458159_5end | |association_with_transcript=119bp_to_ENST00000458159_5end | ||
|cluster_id=chr10:90750896..90750925,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_5_at_ACTA2_5end | |description=CAGE_peak_5_at_ACTA2_5end | ||
|id=chr10:90750896..90750925,- | |id=chr10:90750896..90750925,- | ||
|ontology_enrichment_celltype=CL:0000055!6.94e-22!180;CL:0000183!4.38e-13!59;CL:0000057!3.40e-12!75;CL:0000393!8.16e-12!60;CL:0000211!8.16e-12!60;CL:0000187!1.70e-11!54;CL:0000680!1.85e-11!57;CL:0000056!1.85e-11!57;CL:0000355!1.85e-11!57;CL:0000192!2.71e-07!42;CL:0000514!2.71e-07!42;CL:0002494!9.07e-07!16 | |ontology_enrichment_celltype=CL:0000055!6.94e-22!180;CL:0000183!4.38e-13!59;CL:0000057!3.40e-12!75;CL:0000393!8.16e-12!60;CL:0000211!8.16e-12!60;CL:0000187!1.70e-11!54;CL:0000680!1.85e-11!57;CL:0000056!1.85e-11!57;CL:0000355!1.85e-11!57;CL:0000192!2.71e-07!42;CL:0000514!2.71e-07!42;CL:0002494!9.07e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000393;4.70e-09;61!CL:0000211;4.70e-09;61!CL:0000187;3.02e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,6.31e-14,61;CL:0000211,6.31e-14,61;CL:0000187,3.76e-13,55;CL:0000680,5.58e-12,58;CL:0000056,5.58e-12,58;CL:0000355,5.58e-12,58;CL:0000048,1.57e-11,427;CL:0000034,4.80e-11,441;CL:0000723,6.15e-11,433;CL:0000057,1.39e-09,76;CL:0000192,5.69e-07,43;CL:0000514,5.69e-07,43;CL:0000136,9.22e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;4.12e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.51e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.39e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.23e-12!82;UBERON:0004290!2.54e-12!70;UBERON:0001134!9.14e-12!61;UBERON:0002036!9.14e-12!61;UBERON:0003082!9.14e-12!61;UBERON:0000914!2.57e-11!83;UBERON:0002329!2.57e-11!83;UBERON:0003077!2.57e-11!83;UBERON:0003059!2.57e-11!83;UBERON:0007282!2.57e-11!83;UBERON:0009618!2.57e-11!83;UBERON:0007285!2.57e-11!83;UBERON:0002385!3.87e-11!63;UBERON:0001015!3.87e-11!63;UBERON:0000383!3.87e-11!63;UBERON:0001009!3.70e-09!113;UBERON:0004535!3.75e-09!110;UBERON:0000475!4.21e-08!365;UBERON:0000490!4.78e-08!138;UBERON:0005256!5.33e-08!143;UBERON:0000119!1.31e-07!312;UBERON:0000483!3.25e-07!309;UBERON:0000948!4.03e-07!24;UBERON:0005498!4.03e-07!24;UBERON:0004140!4.03e-07!24;UBERON:0009881!4.03e-07!24;UBERON:0004141!4.03e-07!24;UBERON:0003084!4.03e-07!24;UBERON:0007005!4.03e-07!24;UBERON:0004139!4.03e-07!24;UBERON:0004291!4.03e-07!24;UBERON:0002049!5.52e-07!79;UBERON:0007798!5.52e-07!79;UBERON:0004872!5.71e-07!84;UBERON:0007100!8.20e-07!27;UBERON:0002100!8.72e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;1.77e-07;5!UBERON:0006876;8.69e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.85e-12,62;UBERON:0002036,1.85e-12,62;UBERON:0003082,1.85e-12,62;UBERON:0007524,2.24e-12,73;UBERON:0002329,2.95e-12,71;UBERON:0003059,2.95e-12,71;UBERON:0007282,2.95e-12,71;UBERON:0004290,2.95e-12,71;UBERON:0009618,2.95e-12,71;UBERON:0003077,6.13e-12,72;UBERON:0007285,6.13e-12,72;UBERON:0000486,6.94e-12,83;UBERON:0007503,7.37e-12,78;UBERON:0002385,9.23e-12,64;UBERON:0001015,9.23e-12,64;UBERON:0000383,9.23e-12,64;UBERON:0005256,3.66e-09,122;UBERON:0002072,1.07e-07,5;UBERON:0000490,3.66e-07,148;UBERON:0004535,4.08e-07,109;UBERON:0003104,9.03e-07,160;UBERON:0009142,9.03e-07,160 | |||
|phase1_expression=2.90685406832891,1.92690471501885,1.26858963686374,2.00146596706261,1.34088328328186,0.872338524100369,10.1319951267324,7.58063848112197,1.82829939739887,0.737201809504527,0,0,0,0.123766352960047,0.994192127183747,2.6893005858071,0.602694528023977,0,0.975865597581014,1.96993692922861,2.44800829493104,0.940364164434263,0.572471974262113,0.410623275218653,0.627713197974014,0.305653622991805,0.656804715599566,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0,0.284338464974843,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.650296737799391,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,12.1903433156981,6.03630773733273,3.19656404608826,0.361439152384566,0,0.144846518960824,0,0.486634870302636,2.17430079477356,4.65631734671384,3.86473057049755,0.130979075497713,0.364295288292542,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0,0.860234595106124,0.694281003215189,1.13061588384802,0.838998872419812,0.275118041940067,1.04497483268405,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0,1.62028389576352,0,0,0.225222960966644,0,0,0.732806975721629,0,3.87780264148325,0,1.98788780678127,0.506522046658319,0.264818361626438,1.14734648299525,2.4826786753885,0.560677600142307,1.06748995729705,0.98667019366864,0.622422070799533,1.0776853765575,1.9615428373615,6.05429710579726,5.18558332031999,1.17160715916898,0.624320153660641,0.570471821544449,1.19558944441441,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,1.18800285728205,1.23633464639278,4.55080680969013,9.3420358436111,0,0.375355559615893,0.277064115484183,0,1.22595118319608,0.901428353439581,1.47461838108027,1.4351170855109,1.06778694409284,0.847727604638247,1.20036438433761,1.03052529238439,0.772921620136887,0.930584281657949,0.337552664482532,0.584622030967192,0.504867548488229,1.47279837827679,1.13152239773168,2.13005755509969,0.503760491138201,0.847802961552438,0.193260853163297,0,0.286804595389004,0.121973706129595,0.132529768321485,0.580969714347592,1.45125477021519,0.756962552626885,0,1.56449532329816,3.85944562915731,0,1.39310378409594,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,2.8810180793198,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0,0.857839051492628,0.548751427043128,0,0.100528972411631,0.0925884451585296,0.651616610620649,3.11980435583874,0,0.231860809950154,1.99594780200897,0,1.38895653772983,0,0,0,0.246217006087397,0,0,0,0,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0.763976851116555,0,0,0,0.600686115687835,1.71495859578347,0.560655421726804,1.74384027533312,0.51336800074665,0.775630294546667,0,0.845302752556,2.6593811658487,4.16029747645464,0.257207374262142,0,0.532844358032199,1.28680194292333,2.17048642156577,2.46972101034231,0.977208552881205,0.355391948742546,0,1.20575750823834,0,0.799783929456456,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0,0.788123040807709,0.215627574859517,0.128343036279748,0.76228387266739,0,0.773288812777695,0,1.27587750330633,0,0,0,0.49076596687656,1.00034104211935,1.35632511849868,1.03985430765404,0,0.473107245101804,0.468565659970853,2.10662269809403,2.27407504055985,0,0.664225598535437,1.65932251687533,1.30325421702124,1.37060810223918,4.46086450954113,0,0,0.106727557803444,0,0,0.30239029332968,1.24053903909388,1.53461973288062,1.40330047216537,0.512556597022804,0.511707249066704,1.76939313257968,0,3.70103265126373,13.1395676731714,3.69572202062141,0.519254429183621,4.06736324609857,0,0.601519410909855,0,1.7222167224691,2.54927635209404,2.88473712910733,0,0.385076685522074,0,0,0,0,0.170093705276516,0.431831832204279,0,1.35473218771926,2.00675909541941,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.412164046590889,0.0915694648183434,0,0.574265537996172,1.30012049207304,4.82051789532479,1.93341436584244,2.15668063960502,1.84204409671355,0.689182862422653,2.36324538710202,1.45016693914229,1.44885266607372,4.80772992492382,0,0.768760269460425,0.127612712494584,0.10115778085555,1.39453664789186,0.62962469366128,0,0.616067160352178,1.06461206063404,0,0.55597265731176,0.429374660225974,2.232950216158,0.949138274156178,1.14378116354295,0.767693373934002,2.1396949401696,2.22742273548156,0.78494864019923,1.43897966066652,1.37268514868027,1.17812402345686,0.606547444719948,1.58510321173008,2.10629228119491,1.46290121726877,1.70599442741899,0,1.50149902548784,1.41405431953713,1.13008116620243,1.65409603063837,0,0.876901770507525,2.89387767133344,2.62357900818653,0.811641507850816,0,1.97186921772569,1.00387946542836,0.88424136911809,0,0,1.26664581178598,1.97576935775941,0.379473173765715,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| ||
|short_description=p5@ACTA2 | |short_description=p5@ACTA2 | ||
}} | }} |
Latest revision as of 20:46, 19 September 2015
Short description: | p5@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACTA2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 119bp_to_ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 6.31e-14 | 61 |
electrically active cell | 6.31e-14 | 61 |
muscle cell | 3.76e-13 | 55 |
muscle precursor cell | 5.58e-12 | 58 |
myoblast | 5.58e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.58e-12 | 58 |
multi fate stem cell | 1.57e-11 | 427 |
stem cell | 4.80e-11 | 441 |
somatic stem cell | 6.15e-11 | 433 |
fibroblast | 1.39e-09 | 76 |
smooth muscle cell | 5.69e-07 | 43 |
smooth muscle myoblast | 5.69e-07 | 43 |
fat cell | 9.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.85e-12 | 62 |
striated muscle tissue | 1.85e-12 | 62 |
myotome | 1.85e-12 | 62 |
dense mesenchyme tissue | 2.24e-12 | 73 |
somite | 2.95e-12 | 71 |
presomitic mesoderm | 2.95e-12 | 71 |
presumptive segmental plate | 2.95e-12 | 71 |
dermomyotome | 2.95e-12 | 71 |
trunk paraxial mesoderm | 2.95e-12 | 71 |
paraxial mesoderm | 6.13e-12 | 72 |
presumptive paraxial mesoderm | 6.13e-12 | 72 |
multilaminar epithelium | 6.94e-12 | 83 |
epithelial vesicle | 7.37e-12 | 78 |
muscle tissue | 9.23e-12 | 64 |
musculature | 9.23e-12 | 64 |
musculature of body | 9.23e-12 | 64 |
trunk mesenchyme | 3.66e-09 | 122 |
hypodermis | 1.07e-07 | 5 |
unilaminar epithelium | 3.66e-07 | 148 |
cardiovascular system | 4.08e-07 | 109 |
mesenchyme | 9.03e-07 | 160 |
entire embryonic mesenchyme | 9.03e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.39e-08 | 14 |