FFCP PHASE1:Hg19::chr19:54466179..54466202,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59283 | |EntrezGene=59283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13628 | |HGNC=13628 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXS5 | |UniProt=Q8WXS5 | ||
|association_with_transcript=-87bp_to_NM_031895_5end | |association_with_transcript=-87bp_to_NM_031895_5end | ||
|cluster_id=chr19:54466179..54466202,+ | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_1_at_CACNG8_5end | |description=CAGE_peak_1_at_CACNG8_5end | ||
|id=chr19:54466179..54466202,+ | |id=chr19:54466179..54466202,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.98e-09!5 | |ontology_enrichment_celltype=CL:0002322!2.98e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002591;3.34e-66;1!CL:0000540;2.59e-12;6!CL:0000404;2.59e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.66e-66,1;CL:0000540,2.45e-12,6;CL:0000031,2.45e-12,6;CL:0000404,2.45e-12,6;CL:0000047,1.35e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.59e-12;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.21e-46!34;UBERON:0003528!1.21e-46!34;UBERON:0001893!1.72e-46!34;UBERON:0002791!1.46e-44!33;UBERON:0001869!2.71e-42!32;UBERON:0002780!1.97e-37!41;UBERON:0001890!1.97e-37!41;UBERON:0006240!1.97e-37!41;UBERON:0003080!2.22e-36!42;UBERON:0002619!2.31e-36!22;UBERON:0001049!3.58e-36!57;UBERON:0005068!3.58e-36!57;UBERON:0006241!3.58e-36!57;UBERON:0007135!3.58e-36!57;UBERON:0002616!1.16e-34!59;UBERON:0002346!2.86e-32!90;UBERON:0000956!1.53e-31!25;UBERON:0000203!1.53e-31!25;UBERON:0001950!1.54e-31!20;UBERON:0003075!3.45e-30!86;UBERON:0007284!3.45e-30!86;UBERON:0001017!1.31e-29!82;UBERON:0000955!6.76e-28!69;UBERON:0006238!6.76e-28!69;UBERON:0000073!8.25e-28!94;UBERON:0001016!8.25e-28!94;UBERON:0005743!8.29e-28!86;UBERON:0003056!4.07e-27!61;UBERON:0000025!5.33e-20!194;UBERON:0000033!9.48e-17!123;UBERON:0000924!1.13e-16!173;UBERON:0006601!1.13e-16!173;UBERON:0002308!1.23e-16!9;UBERON:0000125!1.23e-16!9;UBERON:0000153!1.49e-15!129;UBERON:0007811!1.49e-15!129;UBERON:0004111!1.95e-15!241;UBERON:0004121!3.34e-15!169;UBERON:0007023!6.09e-15!115;UBERON:0000200!6.38e-15!6;UBERON:0000477!2.63e-13!286;UBERON:0002420!7.08e-13!9;UBERON:0007245!7.08e-13!9;UBERON:0010009!7.08e-13!9;UBERON:0010011!7.08e-13!9;UBERON:0000454!7.08e-13!9;UBERON:0001872!1.41e-12!5;UBERON:0009663!2.84e-12!7;UBERON:0000483!2.85e-11!309;UBERON:0001871!3.89e-11!7;UBERON:0000119!4.87e-11!312;UBERON:0000349!4.25e-09!5;UBERON:0002771!1.66e-08!3;UBERON:0006331!4.14e-08!3;UBERON:0000064!1.68e-07!219;UBERON:0002298!2.78e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;5.96e-34;2!UBERON:0002012;5.96e-34;2!UBERON:0008886;5.96e-34;2!UBERON:0010313;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,7.05e-34,2;UBERON:0007497,7.05e-34,2;UBERON:0003643,7.05e-34,2;UBERON:0003504,7.05e-34,2;UBERON:0003469,7.05e-34,2;UBERON:0003496,7.05e-34,2;UBERON:0002012,7.05e-34,2;UBERON:0008886,7.05e-34,2;UBERON:0007303,7.05e-34,2;UBERON:0002061,7.05e-34,2;UBERON:0005432,7.05e-34,2;UBERON:0004363,7.05e-34,2;UBERON:0004145,4.09e-23,3;UBERON:0003498,1.83e-14,5;UBERON:0005985,1.83e-14,5;UBERON:0010188,2.74e-12,6;UBERON:0002539,2.74e-12,6;UBERON:0003351,2.74e-12,6;UBERON:0008816,2.74e-12,6;UBERON:0000485,1.21e-08,9;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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| ||
|short_description=p1@CACNG8 | |short_description=p1@CACNG8 | ||
}} | }} |
Latest revision as of 20:42, 19 September 2015
Short description: | p1@CACNG8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNG8_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | -87bp_to_NM_031895_5end |
EntrezGene: | CACNG8 |
HGNC: | 13628 |
UniProt: | Q8WXS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.66e-66 | 1 |
neuron | 2.45e-12 | 6 |
neuroblast | 2.45e-12 | 6 |
electrically signaling cell | 2.45e-12 | 6 |
neuronal stem cell | 1.35e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 7.05e-34 | 2 |
developing epithelial placode | 7.05e-34 | 2 |
respiratory system arterial blood vessel | 7.05e-34 | 2 |
respiratory system blood vessel | 7.05e-34 | 2 |
respiratory system artery | 7.05e-34 | 2 |
head blood vessel | 7.05e-34 | 2 |
pulmonary artery | 7.05e-34 | 2 |
pulmonary vascular system | 7.05e-34 | 2 |
pharyngeal vasculature | 7.05e-34 | 2 |
truncus arteriosus | 7.05e-34 | 2 |
aortic sac | 7.05e-34 | 2 |
pharyngeal arch artery | 7.05e-34 | 2 |
outflow tract | 4.09e-23 | 3 |
heart blood vessel | 1.83e-14 | 5 |
coronary vessel | 1.83e-14 | 5 |
protuberance | 2.74e-12 | 6 |
pharyngeal arch | 2.74e-12 | 6 |
pharyngeal epithelium | 2.74e-12 | 6 |
embryonic head | 2.74e-12 | 6 |
simple columnar epithelium | 1.21e-08 | 9 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |