FFCP PHASE1:Hg19::chr18:52989415..52989429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=G0LNU9,P15884,G0LNV0 | |UniProt=G0LNU9,P15884,G0LNV0 | ||
|association_with_transcript=-325bp_to_NM_001243234,NM_001243235_5end | |||
|cluster_id=chr18:52989415..52989429,- | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_63_at_TCF4_5end | |||
|id=chr18:52989415..52989429,- | |||
|ontology_enrichment_celltype=CL:0002139!1.94e-11!24;CL:0005020!1.97e-09!6;CL:0002138!1.97e-09!6;CL:0005022!1.97e-09!6;CL:0000115!5.63e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.41e-14;5!CL:0000540;7.08e-12;6!CL:0000404;7.08e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.91e-12,6;CL:0000031,7.91e-12,6;CL:0000404,7.91e-12,6;CL:0000047,4.19e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;7.08e-12;6 | |||
|ontology_enrichment_disease=DOID:171!3.25e-08!10;DOID:169!3.76e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;4.07e-12;6!DOID:171;1.24e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.07e-12,6;DOID:171,1.24e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.10e-20!57;UBERON:0005068!8.10e-20!57;UBERON:0006241!8.10e-20!57;UBERON:0007135!8.10e-20!57;UBERON:0002780!1.05e-18!41;UBERON:0001890!1.05e-18!41;UBERON:0006240!1.05e-18!41;UBERON:0000073!1.98e-18!94;UBERON:0001016!1.98e-18!94;UBERON:0003080!3.93e-18!42;UBERON:0002616!3.55e-17!59;UBERON:0002346!8.58e-17!90;UBERON:0002020!1.48e-16!34;UBERON:0003528!1.48e-16!34;UBERON:0003075!2.05e-15!86;UBERON:0007284!2.05e-15!86;UBERON:0005743!2.68e-15!86;UBERON:0001017!3.66e-15!82;UBERON:0002791!5.20e-15!33;UBERON:0001893!1.88e-14!34;UBERON:0002619!6.64e-14!22;UBERON:0000956!7.22e-14!25;UBERON:0000203!7.22e-14!25;UBERON:0001869!8.01e-14!32;UBERON:0000955!1.87e-13!69;UBERON:0006238!1.87e-13!69;UBERON:0003056!2.41e-13!61;UBERON:0001950!3.77e-13!20;UBERON:0007023!5.10e-13!115;UBERON:0000924!6.36e-12!173;UBERON:0006601!6.36e-12!173;UBERON:0004121!7.11e-11!169;UBERON:0003296!2.01e-10!4;UBERON:0010133!2.01e-10!4;UBERON:0000013!1.29e-08!5;UBERON:0002410!1.29e-08!5;UBERON:0000153!1.02e-07!129;UBERON:0007811!1.02e-07!129;UBERON:0000033!1.26e-07!123;UBERON:0000988!2.58e-07!3;UBERON:0002771!3.93e-07!3;UBERON:0004111!5.65e-07!241;UBERON:0001473!5.75e-07!8;UBERON:0004536!5.75e-07!8;UBERON:0006558!5.75e-07!8;UBERON:0001871!7.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;1.12e-17;1!UBERON:0000013;2.41e-14;5!UBERON:0002410;2.41e-14;5!UBERON:0001905;1.64e-09;2!UBERON:0002757;1.64e-09;2!UBERON:0010134;1.64e-09;2!UBERON:0002133;1.64e-09;2!UBERON:0005408;1.64e-09;2!UBERON:0001899;1.64e-09;2!UBERON:0000010;2.20e-08;8!UBERON:0001950;9.51e-08;20!UBERON:0002619;4.04e-07;22!UBERON:0002114;7.08e-07;2!UBERON:0003978;9.37e-07;3!UBERON:0000946;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,1.44e-17,1;UBERON:0000013,2.41e-14,5;UBERON:0002410,2.41e-14,5;UBERON:0001016,6.08e-11,89;UBERON:0001905,1.33e-09,2;UBERON:0002757,1.33e-09,2;UBERON:0010134,1.33e-09,2;UBERON:0005408,1.33e-09,2;UBERON:0001899,1.33e-09,2;UBERON:0002133,1.86e-09,2;UBERON:0000010,2.20e-08,8;UBERON:0001950,9.96e-08,20;UBERON:0002619,4.21e-07,22;UBERON:0004121,5.98e-07,171;UBERON:0000924,5.98e-07,171;UBERON:0006601,5.98e-07,171;UBERON:0001017,6.02e-07,81;UBERON:0002114,6.50e-07,2 | |||
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| ||
|short_description=p63@TCF4 | |||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p63@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_63_at_TCF4_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | -325bp_to_NM_001243234, NM_001243235_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | G0LNU9P15884G0LNV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.91e-12 | 6 |
neuroblast | 7.91e-12 | 6 |
electrically signaling cell | 7.91e-12 | 6 |
neuronal stem cell | 4.19e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 1.44e-17 | 1 |
sympathetic nervous system | 2.41e-14 | 5 |
autonomic nervous system | 2.41e-14 | 5 |
nervous system | 6.08e-11 | 89 |
pineal body | 1.33e-09 | 2 |
regional part of epithalamus | 1.33e-09 | 2 |
secretory circumventricular organ | 1.33e-09 | 2 |
circumventricular organ | 1.33e-09 | 2 |
epithalamus | 1.33e-09 | 2 |
atrioventricular valve | 1.86e-09 | 2 |
peripheral nervous system | 2.20e-08 | 8 |
neocortex | 9.96e-08 | 20 |
regional part of cerebral cortex | 4.21e-07 | 22 |
ectoderm-derived structure | 5.98e-07 | 171 |
ectoderm | 5.98e-07 | 171 |
presumptive ectoderm | 5.98e-07 | 171 |
central nervous system | 6.02e-07 | 81 |
duodenum | 6.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.07e-12 | 6 |
neuroectodermal tumor | 1.24e-07 | 10 |