FFCP PHASE1:Hg19::chr1:92949331..92949377,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2672 | |EntrezGene=2672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4237 | |HGNC=4237 | ||
|TSSclassifier=strong | |||
|UniProt=B3KVN4,Q99684 | |UniProt=B3KVN4,Q99684 | ||
|association_with_transcript=0bp_to_NM_001127215,uc001dou.3_5end | |association_with_transcript=0bp_to_NM_001127215,uc001dou.3_5end | ||
|cluster_id=chr1:92949331..92949377,- | |||
|description=CAGE_peak_2_at_GFI1_5end | |description=CAGE_peak_2_at_GFI1_5end | ||
|id=chr1:92949331..92949377,- | |id=chr1:92949331..92949377,- | ||
|ontology_enrichment_celltype=CL:0000988!1.87e-24!182;CL:0000037!1.97e-24!172;CL:0000566!1.97e-24!172;CL:0002032!4.46e-20!165;CL:0000837!4.46e-20!165;CL:0000738!1.24e-13!140;CL:0000542!5.91e-12!53;CL:0000051!5.91e-12!53;CL:0000838!2.58e-11!52;CL:0000791!3.92e-10!18;CL:0000789!3.92e-10!18;CL:0002420!3.92e-10!18;CL:0002419!3.92e-10!18;CL:0000790!3.92e-10!18;CL:0000084!5.10e-10!25;CL:0000827!5.10e-10!25;CL:0000763!2.84e-09!112;CL:0000049!2.84e-09!112;CL:0002087!1.20e-08!119;CL:0000625!2.31e-08!11;CL:0002031!4.76e-08!124 | |ontology_enrichment_celltype=CL:0000988!1.87e-24!182;CL:0000037!1.97e-24!172;CL:0000566!1.97e-24!172;CL:0002032!4.46e-20!165;CL:0000837!4.46e-20!165;CL:0000738!1.24e-13!140;CL:0000542!5.91e-12!53;CL:0000051!5.91e-12!53;CL:0000838!2.58e-11!52;CL:0000791!3.92e-10!18;CL:0000789!3.92e-10!18;CL:0002420!3.92e-10!18;CL:0002419!3.92e-10!18;CL:0000790!3.92e-10!18;CL:0000084!5.10e-10!25;CL:0000827!5.10e-10!25;CL:0000763!2.84e-09!112;CL:0000049!2.84e-09!112;CL:0002087!1.20e-08!119;CL:0000625!2.31e-08!11;CL:0002031!4.76e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.32e-08;3!CL:0000097;4.05e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.46e-23,177;CL:0000037,2.09e-21,168;CL:0002032,3.94e-18,161;CL:0000837,3.94e-18,161;CL:0000763,2.69e-11,108;CL:0000049,2.69e-11,108;CL:0000784,3.34e-08,3;CL:0000542,4.00e-07,53;CL:0000051,4.00e-07,53;CL:0000097,4.14e-07,5;CL:0002028,4.14e-07,5;CL:0000738,5.07e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.54e-17!39;DOID:8692!8.28e-16!31;DOID:2531!1.97e-15!51;DOID:0060083!1.97e-15!51 | |ontology_enrichment_disease=DOID:1240!1.54e-17!39;DOID:8692!8.28e-16!31;DOID:2531!1.97e-15!51;DOID:0060083!1.97e-15!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.53e-28;31!DOID:1240;6.45e-23;39!DOID:2531;2.04e-15;51!DOID:0060083;2.04e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.68e-30,31;DOID:1240,5.46e-30,39;DOID:2531,2.28e-25,51;DOID:0060083,2.28e-25,51;DOID:0050686,1.94e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.60e-08!15;UBERON:0000179!8.60e-08!15;UBERON:0000463!8.60e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!8.60e-08!15;UBERON:0000179!8.60e-08!15;UBERON:0000463!8.60e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.15e-07;5!UBERON:0005057;1.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.90e-08,7;UBERON:0005057,9.90e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,1.91033514369878,2.13461532569859,1.8890587515283,0,1.15148819429164,0.464448369948228,0,0,0,0,0,4.9912074686924,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.68152568894461,4.74091352595139,0.590129310341499,0.786021525498329,1.02800749499755,1.83905144929746,0,0.473447805734733,0,7.24167969753628,0,0,0.812411591295047,4.35510487067296,6.24284868287415,5.42645085192131,6.35605040907451,4.63684937176084,0,0,1.04535523804977,3.39928028092699,1.14966148080576,1.37450978193052,1.26509846009751,0.95569624297229,1.30216690771284,0.950452044448374,0.752875595388864,1.4078527226986,0,0.947109008176067,0.821127996921047,1.00803371612366,1.87208137048455,0.724122019413995,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.348259474598534,0.132957960518865,23.8490624305342,17.731842234184,23.030365082433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1633966666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,10.7419089496136,1.24396869324463,2.45003920808834,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,1.18218456121156,1.2937654491571,1.28343036279748,0,0,0,0,0.637938751653163,0,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0.411362273086194,0.648473311192717,0.540031437238115,0,0,1.92495971052672,0.245040215981032,1.30062222588003,0.432807638929335,12.1652552125788,0,0,5.745161103971,5.92686031626872,95.4388504407193,98.2790123397106,72.3503932535219,90.4042998610344,67.6713088143181,6.26379577865932,10.1170487315331,18.5655730615764,11.0720021799485,84.8458201546739,32.5675210166965,30.1962745654761,36.3731128931961,100.234092941247,0,0,25.1523780982664,0,11.278960407028,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.828851746593443,0,0,1.72318727645497,0,0,0,51.1572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,6.20538071834636,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0.0915975934018623,0,8.17546385565892,0,0.332423363800313,0,0,0,0,1.11255605286265,0,0,0,0.216388639742091,2.98578579323551,0.973033209536731,1.22206028986725,12.1573662759055,4.07760998523459,4.59456577824004,0,0,0,0,0,0,0,2.41981432097328,1.53036380815245,0.189559738885464,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0.136905378891993,3.83239764200917,0,0,0,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0.13480708770837,0.0984274815147488,0.423366660328922,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,5.25392132795769,0,0,0.293104467356165,2.65013777824443,0,0,0,0,0.533937062838473,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,34.1884481239024,43.3313875546367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,2.59983614611409,40.862932472856,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,14.9048698052369,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0.460935950223117,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,3.74303141539369,0,0,0,0,0.905777061400041,1.54348316215889,1.5299169235277,1.41095188908457,0,0,0,0.891139200981258,0,0,1.03382309777839,2.32048396704878,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.852935927603924,1.90451545170992,28.3545314180067,27.9956961474319,0,0.0636471582781649,0,0,0,0.673520530145875,0.0717222053926763,0,0.0814032686109745,0.960546112899439,0,0,0,0.244482888365733,0.406896178315738,0,4.42802345900258,0.64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1136984606466 | ||
|short_description=p2@GFI1 | |short_description=p2@GFI1 | ||
}} | }} |
Latest revision as of 20:29, 19 September 2015
Short description: | p2@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GFI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001127215, uc001dou.3_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | B3KVN4Q99684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.46e-23 | 177 |
hematopoietic stem cell | 2.09e-21 | 168 |
hematopoietic oligopotent progenitor cell | 3.94e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.94e-18 | 161 |
myeloid cell | 2.69e-11 | 108 |
common myeloid progenitor | 2.69e-11 | 108 |
plasmacytoid dendritic cell | 3.34e-08 | 3 |
lymphocyte | 4.00e-07 | 53 |
common lymphoid progenitor | 4.00e-07 | 53 |
mast cell | 4.14e-07 | 5 |
basophil mast progenitor cell | 4.14e-07 | 5 |
leukocyte | 5.07e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 9.90e-08 | 7 |
immune organ | 9.90e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.68e-30 | 31 |
leukemia | 5.46e-30 | 39 |
hematologic cancer | 2.28e-25 | 51 |
immune system cancer | 2.28e-25 | 51 |
organ system cancer | 1.94e-07 | 137 |