FFCP PHASE1:Hg19::chr3:119278920..119278937,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1700 | |||
|TSSclassifier=strong | |||
|UniProt=A0N0P2,P33681 | |||
|association_with_transcript=-439bp_to_NM_005191,uc003ecq.2_5end | |||
|cluster_id=chr3:119278920..119278937,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_7_at_CD80_5end | |||
|id=chr3:119278920..119278937,- | |||
|ontology_enrichment_celltype=CL:0000453!1.45e-27!5;CL:0000988!9.80e-18!182;CL:0000945!8.56e-17!24;CL:0000826!8.56e-17!24;CL:0000990!1.89e-15!8;CL:0000738!7.82e-15!140;CL:0000080!3.03e-14!6;CL:0002032!7.26e-14!165;CL:0000837!7.26e-14!165;CL:0000037!3.51e-13!172;CL:0000566!3.51e-13!172;CL:0000451!1.10e-12!10;CL:0000838!3.56e-12!52;CL:0000542!6.39e-12!53;CL:0000051!6.39e-12!53;CL:0002031!3.26e-11!124;CL:0002087!5.28e-10!119;CL:0000946!8.24e-10!1;CL:0000786!8.24e-10!1;CL:0000980!8.24e-10!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!2.37e-10!1;DOID:0060061!2.37e-10!1;DOID:8691!2.37e-10!1;DOID:630!5.79e-10!1;DOID:0050177!5.79e-10!1;DOID:0050427!5.79e-10!1;DOID:0060058!1.64e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.06e-34;1!DOID:0060061;7.06e-34;1!DOID:8691;7.06e-34;1!DOID:0060058;3.97e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.06e-34,1;DOID:0060061,7.06e-34,1;DOID:8691,7.06e-34,1;DOID:0060058,3.71e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.59e-12!3;UBERON:0004854!1.59e-12!3;UBERON:0009034!1.59e-12!3;UBERON:0002095!1.59e-12!3;UBERON:0004782!1.59e-12!3;UBERON:0003281!1.59e-12!3;UBERON:0009664!1.59e-12!3;UBERON:0002296!1.59e-12!3;UBERON:0005602!1.59e-12!3;UBERON:0001179!1.59e-12!3;UBERON:0006293!1.59e-12!3;UBERON:0002331!9.51e-09!10;UBERON:0000358!9.51e-09!10;UBERON:0000307!9.51e-09!10;UBERON:0000091!9.51e-09!10;UBERON:0000087!9.51e-09!10;UBERON:0007806!9.51e-09!10;UBERON:0008780!9.51e-09!10;UBERON:0005728!9.51e-09!10;UBERON:0002390!4.97e-07!102;UBERON:0003061!4.97e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.68e-30;10!UBERON:0000178;1.20e-20;15!UBERON:0000179;1.20e-20;15!UBERON:0000463;1.20e-20;15!UBERON:0002390;1.04e-16;32!UBERON:0000478;3.20e-13;24!UBERON:0002106;2.89e-12;3!UBERON:0002193;2.30e-08;42!UBERON:0004177;7.01e-08;5!UBERON:0005057;7.01e-08;5!UBERON:0000922;9.36e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.68e-30,10;UBERON:0000358,1.68e-30,10;UBERON:0000307,1.68e-30,10;UBERON:0000091,1.68e-30,10;UBERON:0000087,1.68e-30,10;UBERON:0007010,1.68e-30,10;UBERON:0007806,1.68e-30,10;UBERON:0008780,1.68e-30,10;UBERON:0005728,1.68e-30,10;UBERON:0000178,1.20e-20,15;UBERON:0000179,1.20e-20,15;UBERON:0000463,1.20e-20,15;UBERON:0000478,3.20e-13,24;UBERON:0002106,2.59e-12,3;UBERON:0004854,2.59e-12,3;UBERON:0009034,2.59e-12,3;UBERON:0002095,2.59e-12,3;UBERON:0004782,2.59e-12,3;UBERON:0003281,2.59e-12,3;UBERON:0009664,2.59e-12,3;UBERON:0002296,2.59e-12,3;UBERON:0005602,2.59e-12,3;UBERON:0001179,2.59e-12,3;UBERON:0006293,2.59e-12,3;UBERON:0002390,8.48e-09,98;UBERON:0003061,8.48e-09,98;UBERON:0002193,5.03e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.314843125254717,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8608451472249,6.30176088627165,7.93606816241461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,1.69899965072379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p7@CD80 | |||
}} |
Latest revision as of 20:19, 19 September 2015
Short description: | p7@CD80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CD80_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -439bp_to_NM_005191, uc003ecq.2_5end |
EntrezGene: | CD80 |
HGNC: | 1700 |
UniProt: | A0N0P2P33681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.68e-30 | 10 |
blastocyst | 1.68e-30 | 10 |
blastula | 1.68e-30 | 10 |
bilaminar disc | 1.68e-30 | 10 |
inner cell mass | 1.68e-30 | 10 |
cleaving embryo | 1.68e-30 | 10 |
connecting stalk | 1.68e-30 | 10 |
inner cell mass derived epiblast | 1.68e-30 | 10 |
extraembryonic mesoderm | 1.68e-30 | 10 |
blood | 1.20e-20 | 15 |
haemolymphatic fluid | 1.20e-20 | 15 |
organism substance | 1.20e-20 | 15 |
extraembryonic structure | 3.20e-13 | 24 |
spleen | 2.59e-12 | 3 |
gastrointestinal system mesentery | 2.59e-12 | 3 |
stomach region | 2.59e-12 | 3 |
mesentery | 2.59e-12 | 3 |
gastrointestinal system serosa | 2.59e-12 | 3 |
mesentery of stomach | 2.59e-12 | 3 |
gut mesentery | 2.59e-12 | 3 |
dorsal mesentery | 2.59e-12 | 3 |
dorsal mesogastrium | 2.59e-12 | 3 |
peritoneal cavity | 2.59e-12 | 3 |
spleen primordium | 2.59e-12 | 3 |
hematopoietic system | 8.48e-09 | 98 |
blood island | 8.48e-09 | 98 |
hemolymphoid system | 5.03e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.06e-34 | 1 |
cutaneous T cell lymphoma | 7.06e-34 | 1 |
mycosis fungoides | 7.06e-34 | 1 |
lymphoma | 3.71e-14 | 10 |