FFCP PHASE1:Hg19::chr6:75855870..75855893,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1303 | |EntrezGene=1303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2188 | |HGNC=2188 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=107bp_to_ENST00000474564_5end | |association_with_transcript=107bp_to_ENST00000474564_5end | ||
|cluster_id=chr6:75855870..75855893,- | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_6_at_COL12A1_5end | |description=CAGE_peak_6_at_COL12A1_5end | ||
|id=chr6:75855870..75855893,- | |id=chr6:75855870..75855893,- | ||
|ontology_enrichment_celltype=CL:0000057!4.84e-19!75;CL:0002620!8.63e-13!23;CL:0000055!3.54e-12!180;CL:0000499!6.73e-09!27;CL:0002334!8.02e-09!12 | |ontology_enrichment_celltype=CL:0000057!4.84e-19!75;CL:0002620!8.63e-13!23;CL:0000055!3.54e-12!180;CL:0000499!6.73e-09!27;CL:0002334!8.02e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.68e-15;23!CL:0002334;1.38e-11;12!CL:0000153;4.13e-11;9!CL:0000447;4.13e-11;9!CL:0002580;4.43e-10;3!CL:0000499;5.34e-10;28!CL:0002615;8.05e-10;3!CL:0000135;9.71e-10;3!CL:0000388;9.71e-10;3!CL:0002579;9.99e-10;3!CL:0000327;2.31e-08;15!CL:0000138;5.26e-08;6!CL:0000136;6.40e-08;13!CL:0000197;1.29e-07;6!CL:0000098;1.29e-07;6!CL:0002167;1.29e-07;6!CL:0002617;2.88e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.69e-18,76;CL:0002620,4.81e-15,23;CL:0002334,1.25e-11,12;CL:0000153,3.96e-11,9;CL:0000447,3.96e-11,9;CL:0002580,4.19e-10,3;CL:0000499,5.83e-10,28;CL:0002615,7.52e-10,3;CL:0002579,8.94e-10,3;CL:0000135,1.06e-09,3;CL:0000388,1.06e-09,3;CL:0000136,6.59e-09,15;CL:0000327,2.18e-08,15;CL:0000058,4.65e-08,6;CL:0000138,4.65e-08,6;CL:0000197,9.73e-08,6;CL:0000098,9.73e-08,6;CL:0002167,9.73e-08,6;CL:0002320,1.36e-07,361;CL:0000048,1.64e-07,427;CL:0000134,2.02e-07,354;CL:0002617,2.93e-07,2;CL:0000723,3.14e-07,433;CL:0000034,7.23e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;8.36e-14;5!DOID:450;8.36e-14;5!DOID:66;8.36e-14;5!DOID:423;8.36e-14;5!DOID:0080000;8.36e-14;5!DOID:11722;8.36e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.23e-14,5;DOID:450,6.23e-14,5;DOID:66,6.23e-14,5;DOID:423,6.23e-14,5;DOID:0080000,6.23e-14,5;DOID:11722,6.23e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.68e-11!95;UBERON:0002199!8.20e-11!45;UBERON:0002416!8.20e-11!45;UBERON:0002097!1.49e-09!40;UBERON:0001013!3.35e-08!14;UBERON:0003688!8.44e-08!6;UBERON:0002358!8.44e-08!6;UBERON:0003684!8.44e-08!6;UBERON:0001178!8.44e-08!6 | |ontology_enrichment_uberon=UBERON:0003102!1.68e-11!95;UBERON:0002199!8.20e-11!45;UBERON:0002416!8.20e-11!45;UBERON:0002097!1.49e-09!40;UBERON:0001013!3.35e-08!14;UBERON:0003688!8.44e-08!6;UBERON:0002358!8.44e-08!6;UBERON:0003684!8.44e-08!6;UBERON:0001178!8.44e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.83e-20;9!UBERON:0000042;3.83e-20;9!UBERON:0003688;7.76e-18;6!UBERON:0002358;7.76e-18;6!UBERON:0003684;7.76e-18;6!UBERON:0001178;7.76e-18;6!UBERON:0007846;9.71e-10;3!UBERON:0000043;9.71e-10;3!UBERON:0007845;9.71e-10;3!UBERON:0002097;6.79e-08;41!UBERON:0000310;1.41e-07;10!UBERON:0005406;3.92e-07;2!UBERON:0001443;7.64e-07;11!UBERON:0002199;8.01e-07;46!UBERON:0002416;8.01e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.50e-18,6;UBERON:0002358,6.50e-18,6;UBERON:0003684,6.50e-18,6;UBERON:0001178,6.50e-18,6;UBERON:0004457,1.01e-14,12;UBERON:0000042,1.01e-14,12;UBERON:0002097,5.20e-10,41;UBERON:0007846,1.06e-09,3;UBERON:0000043,1.06e-09,3;UBERON:0007845,1.06e-09,3;UBERON:0002199,1.43e-08,46;UBERON:0002416,1.43e-08,46;UBERON:0002384,3.13e-08,371;UBERON:0000310,1.38e-07,10;UBERON:0005406,3.82e-07,2;UBERON:0001443,7.52e-07,11 | |||
|phase1_expression=5.26867299884614,17.5562429590606,4.51054093107108,7.00513088471913,4.91657203870017,7.85104671690332,0,0.631719873426831,0.522371256399677,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,2.53007406669196,2.50668955317945,14.4846518960824,0,3.89307896242109,0,0.665188192387692,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,3.47880366186723,0,0,0.860509862246441,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0.206651562351531,0,1.23633464639278,0,0,0.505008341862199,0.375355559615893,0,0.438977620880838,1.5324389789951,0.45071417671979,0.226864366320042,3.7671823494661,6.40672166455702,1.69545520927649,2.10063767259082,1.54578793857658,8.24449728146013,2.79175284497385,0.506328996723799,1.36411807225678,2.01947019395292,2.57739716198438,3.39456719319505,4.26011511019937,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,0,0.236613600079688,0.337169380156203,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,1.690605505112,0.797814349754612,0,0,0,0,1.00084595560703,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,1.50051156317903,0,1.87173775377726,4.10386674233472,2.68094105557689,2.34282829985426,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0.907170879989041,7.93944985020086,5.83155498494637,19.3655465158821,2.56278298511402,6.65219423786715,12.3857519280578,4.45254199334973,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0.601519410909855,0.0920809889358963,0.68888668898764,0.728364672026868,1.04899531967539,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.247528499761764,0,0.650060246036521,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.322260734604821,0.725083469571143,0.170453254832202,0.623224249527161,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0.372158369359667,0,1.14378116354295,0,2.1396949401696,0,0,0.719489830333259,1.37268514868027,0.824686816419805,0,0,0,0,0,0,0.682499557039929,3.39373036688911,0,0,0.66343897524122,0.438450885253763,0,1.31178950409327,0,0,0,0.143411352204052,1.08073945114433,0,0,3.16661452946496,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,1.18785872333055,0.307160702099232,0,0,0.445234820091624,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,1.70913083770502,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0.19351266257817,0.438535902517113,0.0821154570532092,0.581934098930517,0,0.451961481561065,0,0,0,0,0.0801588202515337,0,0.599428828746391,0.144090417154106,0,0,0,0,0,0,0,0.611989305817931,0,0,0.136905378891993,0,0,0,0.837847203816763,0,0,0.399358000997982,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0,0,0,2.034148301238,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,2.21922344601045,0.568209015825267,1.76097531226803,0.889811221596536,0,0.151230923763239,0.310874401165561,0.147855149989634,0.318593534327405,0,0.776314784381297,0,0.265841714557995,0.521745061811734,0.901545653983311,0,0.406870733204662,0.727394636810238,0.322231671127465,0,2.78667122089031,0.800055529326307,1.71697852591396,0.673498977531838,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0.179088841081487,0.617602894321944,0,0.176689145945881,0,0.337884881306145,0,1.0362910251936,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,8.88111884324281,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0.198916222116275,0.225630985047772,0,0,0.261906694481422,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0.065772773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| ||
|short_description=p6@COL12A1 | |short_description=p6@COL12A1 | ||
}} | }} |
Latest revision as of 20:12, 19 September 2015
Short description: | p6@COL12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_COL12A1_5end |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | 107bp_to_ENST00000474564_5end |
EntrezGene: | COL12A1 |
HGNC: | 2188 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.69e-18 | 76 |
skin fibroblast | 4.81e-15 | 23 |
preadipocyte | 1.25e-11 | 12 |
GAG secreting cell | 3.96e-11 | 9 |
carbohydrate secreting cell | 3.96e-11 | 9 |
preadipocyte of the breast | 4.19e-10 | 3 |
stromal cell | 5.83e-10 | 28 |
adipocyte of omentum tissue | 7.52e-10 | 3 |
omentum preadipocyte | 8.94e-10 | 3 |
fibrocyte | 1.06e-09 | 3 |
tendon cell | 1.06e-09 | 3 |
fat cell | 6.59e-09 | 15 |
extracellular matrix secreting cell | 2.18e-08 | 15 |
chondroblast | 4.65e-08 | 6 |
chondrocyte | 4.65e-08 | 6 |
receptor cell | 9.73e-08 | 6 |
sensory epithelial cell | 9.73e-08 | 6 |
olfactory epithelial cell | 9.73e-08 | 6 |
connective tissue cell | 1.36e-07 | 361 |
multi fate stem cell | 1.64e-07 | 427 |
mesenchymal cell | 2.02e-07 | 354 |
adipocyte of breast | 2.93e-07 | 2 |
somatic stem cell | 3.14e-07 | 433 |
stem cell | 7.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.50e-18 | 6 |
peritoneum | 6.50e-18 | 6 |
abdominal cavity | 6.50e-18 | 6 |
visceral peritoneum | 6.50e-18 | 6 |
cavity lining | 1.01e-14 | 12 |
serous membrane | 1.01e-14 | 12 |
skin of body | 5.20e-10 | 41 |
dense regular connective tissue | 1.06e-09 | 3 |
tendon | 1.06e-09 | 3 |
regular connective tissue | 1.06e-09 | 3 |
integument | 1.43e-08 | 46 |
integumental system | 1.43e-08 | 46 |
connective tissue | 3.13e-08 | 371 |
breast | 1.38e-07 | 10 |
perirenal fat | 3.82e-07 | 2 |
chest | 7.52e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.23e-14 | 5 |
myotonic disease | 6.23e-14 | 5 |
muscle tissue disease | 6.23e-14 | 5 |
myopathy | 6.23e-14 | 5 |
muscular disease | 6.23e-14 | 5 |
myotonic dystrophy | 6.23e-14 | 5 |