FFCP PHASE1:Hg19::chr3:119276758..119276770,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1700 | |||
|TSSclassifier=strong | |||
|UniProt=Q5DTA9,Q5DTB0 | |||
|association_with_transcript=4bp_to_uc003ecr.1,uc010hqt.1,uc010hqu.1_5end | |||
|cluster_id=chr3:119276758..119276770,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_9_at_CD80_5end | |||
|id=chr3:119276758..119276770,- | |||
|ontology_enrichment_celltype=CL:0000945!4.95e-53!24;CL:0000826!4.95e-53!24;CL:0000838!2.00e-31!52;CL:0000542!9.62e-31!53;CL:0000051!9.62e-31!53;CL:0000738!1.79e-23!140;CL:0000988!8.84e-23!182;CL:0002087!1.61e-22!119;CL:0002031!2.27e-21!124;CL:0000236!1.29e-20!14;CL:0002032!1.82e-20!165;CL:0000837!1.82e-20!165;CL:0000037!2.32e-19!172;CL:0000566!2.32e-19!172;CL:0000990!9.43e-19!8;CL:0000451!3.11e-15!10;CL:0000785!3.34e-10!2;CL:0000955!3.34e-10!2;CL:0000818!3.34e-10!2;CL:0000954!3.34e-10!2;CL:0000816!3.34e-10!2;CL:0000453!4.27e-09!5;CL:0000080!3.28e-08!6;CL:0000840!6.83e-08!5;CL:0001029!6.83e-08!5;CL:0000817!4.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.49e-24;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.40e-24,24;CL:0000826,1.40e-24,24;CL:0000838,2.81e-11,52;CL:0000542,4.62e-11,53;CL:0000051,4.62e-11,53;CL:0000988,1.71e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.06e-22!10;DOID:2531!2.70e-07!51;DOID:0060083!2.70e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:630;1.03e-17;1!DOID:0050177;1.03e-17;1!DOID:0050427;1.03e-17;1!DOID:0060058;1.20e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.37e-18,1;DOID:0050177,7.37e-18,1;DOID:0050427,7.37e-18,1;DOID:0060058,1.17e-15,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.20e-15;10!UBERON:0000178;1.21e-10;15!UBERON:0000179;1.21e-10;15!UBERON:0000463;1.21e-10;15!UBERON:0002390;1.69e-08;32!UBERON:0002106;6.88e-07;3!UBERON:0000478;7.39e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.01e-15,10;UBERON:0000358,1.01e-15,10;UBERON:0000307,1.01e-15,10;UBERON:0000091,1.01e-15,10;UBERON:0000087,1.01e-15,10;UBERON:0007010,1.01e-15,10;UBERON:0007806,1.01e-15,10;UBERON:0008780,1.01e-15,10;UBERON:0005728,1.01e-15,10;UBERON:0000178,1.08e-10,15;UBERON:0000179,1.08e-10,15;UBERON:0000463,1.08e-10,15;UBERON:0002106,6.88e-07,3;UBERON:0004854,6.88e-07,3;UBERON:0009034,6.88e-07,3;UBERON:0002095,6.88e-07,3;UBERON:0004782,6.88e-07,3;UBERON:0003281,6.88e-07,3;UBERON:0009664,6.88e-07,3;UBERON:0002296,6.88e-07,3;UBERON:0005602,6.88e-07,3;UBERON:0001179,6.88e-07,3;UBERON:0006293,6.88e-07,3;UBERON:0000478,6.89e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,3.41206157969812,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,1.10483290796269,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0.384273959177026,1.04047478047903,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.870648686496336,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,2.09244169283818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,1.97702302314405,2.61054873763638,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0.490696182767533,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39858774219829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |||
|short_description=p9@CD80 | |||
}} |
Latest revision as of 20:10, 19 September 2015
Short description: | p9@CD80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CD80_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 4bp_to_uc003ecr.1, uc010hqt.1, uc010hqu.1_5end |
EntrezGene: | CD80 |
HGNC: | 1700 |
UniProt: | Q5DTA9Q5DTB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.40e-24 | 24 |
pro-B cell | 1.40e-24 | 24 |
lymphoid lineage restricted progenitor cell | 2.81e-11 | 52 |
lymphocyte | 4.62e-11 | 53 |
common lymphoid progenitor | 4.62e-11 | 53 |
hematopoietic cell | 1.71e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.01e-15 | 10 |
blastocyst | 1.01e-15 | 10 |
blastula | 1.01e-15 | 10 |
bilaminar disc | 1.01e-15 | 10 |
inner cell mass | 1.01e-15 | 10 |
cleaving embryo | 1.01e-15 | 10 |
connecting stalk | 1.01e-15 | 10 |
inner cell mass derived epiblast | 1.01e-15 | 10 |
extraembryonic mesoderm | 1.01e-15 | 10 |
blood | 1.08e-10 | 15 |
haemolymphatic fluid | 1.08e-10 | 15 |
organism substance | 1.08e-10 | 15 |
spleen | 6.88e-07 | 3 |
gastrointestinal system mesentery | 6.88e-07 | 3 |
stomach region | 6.88e-07 | 3 |
mesentery | 6.88e-07 | 3 |
gastrointestinal system serosa | 6.88e-07 | 3 |
mesentery of stomach | 6.88e-07 | 3 |
gut mesentery | 6.88e-07 | 3 |
dorsal mesentery | 6.88e-07 | 3 |
dorsal mesogastrium | 6.88e-07 | 3 |
peritoneal cavity | 6.88e-07 | 3 |
spleen primordium | 6.88e-07 | 3 |
extraembryonic structure | 6.89e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.37e-18 | 1 |
monogenic disease | 7.37e-18 | 1 |
xeroderma pigmentosum | 7.37e-18 | 1 |
lymphoma | 1.17e-15 | 10 |