FFCP PHASE1:Hg19::chr6:7584673..7584685,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:7584673..7584685,+
|short_description=p18@DSP
|description=CAGE_peak_18_at_DSP_5end
|association_with_transcript=-278bp_to_AK130229_5end
|EntrezGene=1832
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZP16 | |UniProt=Q6ZP16 | ||
|association_with_transcript=-278bp_to_AK130229_5end | |||
|cluster_id=chr6:7584673..7584685,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_18_at_DSP_5end | |||
|id=chr6:7584673..7584685,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.16e-14!43;CL:0000066!4.06e-14!254;CL:0000223!3.60e-13!59;CL:0002251!2.05e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0000622;4.82e-18;5!CL:0000154;3.88e-15;6!CL:0002623;4.41e-14;3!CL:0002541;6.94e-14;3!CL:0002231;1.50e-13;3!CL:0000150;2.82e-10;9!CL:0002537;1.72e-08;5!CL:0000349;2.90e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,5.27e-18,5;CL:0000154,4.18e-15,6;CL:0002623,4.72e-14,3;CL:0002541,7.42e-14,3;CL:0002231,1.50e-13,3;CL:0000150,2.96e-10,9;CL:0002537,1.05e-08,5;CL:0000349,2.31e-08,19;CL:0002076,9.18e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.61e-11;1 | |||
|ontology_enrichment_disease=DOID:305!3.87e-10!106;DOID:0050687!1.01e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:114;2.48e-20;2!DOID:178;8.61e-11;1!DOID:326;8.61e-11;1!DOID:3978;8.61e-11;1!DOID:3394;8.61e-11;1!DOID:5844;8.61e-11;1!DOID:1287;1.21e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.04e-20,2;DOID:178,1.33e-10,1;DOID:326,1.33e-10,1;DOID:3978,1.33e-10,1;DOID:3394,1.33e-10,1;DOID:5844,1.33e-10,1;DOID:1287,1.54e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.25e-09!169;UBERON:0000925!3.25e-09!169;UBERON:0006595!3.25e-09!169;UBERON:0001007!2.29e-08!155;UBERON:0001555!2.29e-08!155;UBERON:0007026!2.29e-08!155;UBERON:0001004!1.60e-07!72;UBERON:0000161!5.37e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.59e-15;10!UBERON:0000158;1.59e-15;10!UBERON:0003124;6.94e-14;3!UBERON:0000920;6.94e-14;3!UBERON:0001044;1.78e-07;6!UBERON:0003293;1.78e-07;6!UBERON:0003294;1.78e-07;6!UBERON:0010047;1.78e-07;6!UBERON:0003408;1.78e-07;6!UBERON:0000167;1.78e-07;6!UBERON:0001041;8.95e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.42e-14,3;UBERON:0005631,2.72e-11,14;UBERON:0000158,2.72e-11,14;UBERON:0000161,3.75e-09,36;UBERON:0001044,1.84e-07,6;UBERON:0003293,1.84e-07,6;UBERON:0003294,1.84e-07,6;UBERON:0010047,1.84e-07,6;UBERON:0000167,1.84e-07,6;UBERON:0000166,3.22e-07,22 | |||
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| ||
|short_description=p18@DSP | |||
}} | }} |
Latest revision as of 20:07, 19 September 2015
Short description: | p18@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_DSP_5end |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | -278bp_to_AK130229_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | Q6ZP16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 5.27e-18 | 5 |
protein secreting cell | 4.18e-15 | 6 |
acinar cell of salivary gland | 4.72e-14 | 3 |
chorionic membrane mesenchymal stem cell | 7.42e-14 | 3 |
epithelial cell of prostate | 1.50e-13 | 3 |
glandular epithelial cell | 2.96e-10 | 9 |
amnion mesenchymal stem cell | 1.05e-08 | 5 |
extraembryonic cell | 2.31e-08 | 19 |
endo-epithelial cell | 9.18e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.42e-14 | 3 |
extraembryonic membrane | 2.72e-11 | 14 |
membranous layer | 2.72e-11 | 14 |
orifice | 3.75e-09 | 36 |
saliva-secreting gland | 1.84e-07 | 6 |
gland of oral region | 1.84e-07 | 6 |
gland of foregut | 1.84e-07 | 6 |
oral gland | 1.84e-07 | 6 |
oral cavity | 1.84e-07 | 6 |
oral opening | 3.22e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.04e-20 | 2 |
vascular disease | 1.33e-10 | 1 |
ischemia | 1.33e-10 | 1 |
extrinsic cardiomyopathy | 1.33e-10 | 1 |
myocardial ischemia | 1.33e-10 | 1 |
myocardial infarction | 1.33e-10 | 1 |
cardiovascular system disease | 1.54e-10 | 4 |