FFCP PHASE1:Hg19::chr18:5197646..5197692,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=642597 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28285 | |||
|TSSclassifier=strong | |||
|UniProt=P0CW23 | |||
|association_with_transcript=-391bp_to_ENST00000434239,NM_001145194,uc010wzc.1_5end | |||
|cluster_id=chr18:5197646..5197692,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_C18orf42_5end | |||
|id=chr18:5197646..5197692,- | |||
|ontology_enrichment_celltype=CL:0000242!4.12e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.63e-18;2!CL:0000242;1.63e-18;2!CL:0002553;2.84e-10;1!CL:0000312;5.99e-08;5!CL:0000240;9.28e-07;6!CL:0000311;9.28e-07;6!CL:0000079;9.28e-07;6!CL:0000237;9.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.20e-18,2;CL:0002553,3.10e-10,1;CL:0000312,5.31e-08,5;CL:0000240,8.39e-07,6;CL:0000311,8.39e-07,6;CL:0000079,8.39e-07,6;CL:0000237,8.39e-07,6;CL:0000036,8.39e-07,6;CL:0000357,8.39e-07,6;CL:0000114,8.39e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.80e-28;3!UBERON:0006222;7.88e-10;1!UBERON:0006601;1.32e-09;82!CL:0000357;9.28e-07;6!CL:0000114;9.28e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.33e-89!57;UBERON:0005068!3.33e-89!57;UBERON:0006241!3.33e-89!57;UBERON:0007135!3.33e-89!57;UBERON:0002616!1.55e-81!59;UBERON:0000955!2.95e-78!69;UBERON:0006238!2.95e-78!69;UBERON:0001017!3.89e-78!82;UBERON:0005743!2.13e-77!86;UBERON:0002780!2.40e-75!41;UBERON:0001890!2.40e-75!41;UBERON:0006240!2.40e-75!41;UBERON:0003080!2.19e-73!42;UBERON:0000073!1.56e-72!94;UBERON:0001016!1.56e-72!94;UBERON:0003075!4.16e-68!86;UBERON:0007284!4.16e-68!86;UBERON:0002346!1.30e-64!90;UBERON:0002020!5.10e-59!34;UBERON:0003528!5.10e-59!34;UBERON:0001893!6.99e-59!34;UBERON:0001869!2.44e-58!32;UBERON:0003056!7.40e-58!61;UBERON:0002619!2.13e-56!22;UBERON:0002791!4.99e-56!33;UBERON:0007023!1.48e-53!115;UBERON:0001950!3.25e-50!20;UBERON:0000956!3.15e-49!25;UBERON:0000203!3.15e-49!25;UBERON:0000033!4.53e-46!123;UBERON:0000153!1.97e-43!129;UBERON:0007811!1.97e-43!129;UBERON:0004121!2.37e-41!169;UBERON:0000924!3.93e-40!173;UBERON:0006601!3.93e-40!173;UBERON:0000025!7.55e-23!194;UBERON:0000200!1.39e-18!6;UBERON:0004111!2.32e-18!241;UBERON:0001871!3.02e-18!7;UBERON:0001894!1.03e-17!7;UBERON:0006222!1.03e-17!7;UBERON:0004733!5.96e-17!12;UBERON:0002028!5.96e-17!12;UBERON:0007277!5.96e-17!12;UBERON:0003076!1.13e-16!15;UBERON:0003057!1.13e-16!15;UBERON:0001872!2.17e-16!5;UBERON:0000349!5.31e-16!5;UBERON:0004732!1.56e-15!13;UBERON:0000477!1.64e-15!286;UBERON:0000483!1.89e-15!309;UBERON:0000119!3.45e-15!312;UBERON:0003296!1.41e-14!4;UBERON:0010133!1.41e-14!4;UBERON:0000475!2.41e-14!365;UBERON:0000064!2.88e-13!219;UBERON:0002680!3.83e-13!9;UBERON:0001895!3.83e-13!9;UBERON:0010092!3.83e-13!9;UBERON:0002308!1.57e-11!9;UBERON:0000125!1.57e-11!9;UBERON:0002420!1.73e-11!9;UBERON:0007245!1.73e-11!9;UBERON:0010009!1.73e-11!9;UBERON:0010011!1.73e-11!9;UBERON:0000454!1.73e-11!9;UBERON:0002021!1.24e-10!5;UBERON:0000988!3.21e-10!3;UBERON:0002298!4.61e-10!8;UBERON:0002771!6.85e-10!3;UBERON:0000481!2.85e-09!347;UBERON:0000062!1.93e-08!511;UBERON:0001905!3.47e-08!2;UBERON:0002757!3.47e-08!2;UBERON:0010134!3.47e-08!2;UBERON:0002784!3.47e-08!2;UBERON:0005408!3.47e-08!2;UBERON:0001899!3.47e-08!2;UBERON:0000007!4.41e-08!2;UBERON:0001954!7.31e-08!2;UBERON:0003022!7.31e-08!2;UBERON:0002421!7.31e-08!2;UBERON:0002600!7.31e-08!2;UBERON:0001870!2.03e-07!2;UBERON:0002148!2.79e-07!2;UBERON:0009662!2.79e-07!2;UBERON:0000369!3.18e-07!4;UBERON:0002435!3.18e-07!4;UBERON:0000204!3.18e-07!4;UBERON:0010082!3.18e-07!4;UBERON:0001876!3.28e-07!2;UBERON:0000922!3.69e-07!612;UBERON:0009663!6.61e-07!7;UBERON:0000923!7.97e-07!604;UBERON:0005291!7.97e-07!604;UBERON:0006598!7.97e-07!604;UBERON:0002532!7.97e-07!604;UBERON:0002050!8.61e-07!605;UBERON:0005423!8.61e-07!605;UBERON:0000467!9.95e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;2.03e-44;7!UBERON:0003296;1.82e-35;4!UBERON:0010133;1.82e-35;4!UBERON:0000073;1.66e-25;53!UBERON:0002616;1.66e-25;53!UBERON:0002780;5.74e-23;41!UBERON:0001890;5.74e-23;41!UBERON:0002784;1.60e-20;4!UBERON:0001905;8.39e-19;2!UBERON:0002757;8.39e-19;2!UBERON:0010134;8.39e-19;2!UBERON:0005408;8.39e-19;2!UBERON:0001899;8.39e-19;2!UBERON:0000007;1.71e-18;2!UBERON:0004733;2.08e-18;12!UBERON:0002028;2.08e-18;12!UBERON:0001954;3.30e-18;2!UBERON:0003022;3.30e-18;2!UBERON:0002421;3.30e-18;2!UBERON:0002600;3.30e-18;2!UBERON:0004732;5.50e-17;13!UBERON:0002680;4.16e-16;9!UBERON:0001895;4.16e-16;9!UBERON:0000955;1.13e-15;68!UBERON:0002037;3.17e-14;6!UBERON:0001017;1.52e-13;75!UBERON:0001016;1.73e-13;83!UBERON:0002619;6.60e-13;22!UBERON:0000956;2.28e-11;25!UBERON:0000203;2.28e-11;25!UBERON:0007023;8.08e-09;114!UBERON:0002791;1.15e-08;32!UBERON:0001869;1.15e-08;32!UBERON:0003528;1.31e-08;34!UBERON:0002020;1.31e-08;34!UBERON:0000349;7.90e-08;5!UBERON:0001872;1.02e-07;5!UBERON:0002021;1.02e-07;5!UBERON:0001893;2.29e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,1.69e-44,7;UBERON:0006222,1.69e-44,7;UBERON:0000073,1.72e-43,53;UBERON:0002616,1.72e-43,53;UBERON:0001049,4.65e-41,56;UBERON:0005068,4.65e-41,56;UBERON:0006241,4.65e-41,56;UBERON:0007135,4.65e-41,56;UBERON:0003296,1.40e-35,4;UBERON:0010133,1.40e-35,4;UBERON:0000955,6.30e-33,68;UBERON:0006238,6.30e-33,68;UBERON:0001016,6.13e-31,89;UBERON:0001017,8.49e-31,81;UBERON:0002780,1.84e-27,41;UBERON:0001890,1.84e-27,41;UBERON:0003080,1.84e-27,41;UBERON:0006240,1.84e-27,41;UBERON:0003075,2.46e-27,82;UBERON:0007284,2.46e-27,82;UBERON:0010371,8.60e-27,104;UBERON:0002346,5.96e-26,86;UBERON:0002784,1.41e-20,4;UBERON:0007023,3.85e-19,114;UBERON:0001905,7.68e-19,2;UBERON:0002757,7.68e-19,2;UBERON:0010134,7.68e-19,2;UBERON:0005408,7.68e-19,2;UBERON:0001899,7.68e-19,2;UBERON:0004121,8.47e-19,171;UBERON:0000924,8.47e-19,171;UBERON:0006601,8.47e-19,171;UBERON:0000007,1.43e-18,2;UBERON:0004733,2.12e-18,12;UBERON:0002028,2.12e-18,12;UBERON:0007277,2.12e-18,12;UBERON:0001954,5.34e-18,2;UBERON:0003022,5.34e-18,2;UBERON:0002421,5.34e-18,2;UBERON:0002600,5.34e-18,2;UBERON:0003056,5.55e-18,61;UBERON:0004732,5.60e-17,13;UBERON:0002680,3.93e-16,9;UBERON:0001895,3.93e-16,9;UBERON:0010092,3.93e-16,9;UBERON:0010314,5.42e-16,132;UBERON:0003076,1.06e-14,15;UBERON:0003057,1.06e-14,15;UBERON:0002037,3.17e-14,6;UBERON:0006215,3.17e-14,6;UBERON:0002619,7.59e-13,22;UBERON:0011216,4.10e-12,223;UBERON:0000025,1.39e-11,192;UBERON:0000956,2.58e-11,25;UBERON:0000203,2.58e-11,25;UBERON:0003528,3.76e-11,34;UBERON:0002020,3.76e-11,34;UBERON:0002791,8.02e-09,32;UBERON:0001869,8.02e-09,32;UBERON:0004111,1.17e-08,240;UBERON:0001893,2.72e-08,34;UBERON:0000483,4.23e-08,306;UBERON:0000119,5.46e-08,309;UBERON:0002021,9.23e-08,5;UBERON:0000349,9.55e-08,5;UBERON:0001872,1.17e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,1.72371686620732,0,0,0,0.120596438625408,19.8356257212208,26.096705343769,7.68423809279223,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,1.0896272488926,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.500763722825999,0,2.3295100822739,0.931446044120752,0,0,0,0,0,16.8600566090477,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47630299562781,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0.256916900385838,1.41696576325585,0.159633859057151,1.43581454968528,0,0.553258019713743,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0.781078098613847,1.2401207790071,0.697573912132975,1.09394961803644,0,0,0,0,3.74991285114801,3.69912094440706,2.42786241694653,2.50428410486427,0,0,0,0.815636795721981,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0.285906176706625,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@C18orf42 | |||
}} |
Latest revision as of 19:53, 19 September 2015
Short description: | p1@C18orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C18orf42_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -391bp_to_ENST00000434239, NM_001145194, uc010wzc.1_5end |
EntrezGene: | C18orf42 |
HGNC: | 28285 |
UniProt: | P0CW23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.20e-18 | 2 |
lung fibroblast | 3.10e-10 | 1 |
keratinocyte | 5.31e-08 | 5 |
stratified squamous epithelial cell | 8.39e-07 | 6 |
keratin accumulating cell | 8.39e-07 | 6 |
stratified epithelial cell | 8.39e-07 | 6 |
keratinizing barrier epithelial cell | 8.39e-07 | 6 |
epithelial fate stem cell | 8.39e-07 | 6 |
stratified epithelial stem cell | 8.39e-07 | 6 |
surface ectodermal cell | 8.39e-07 | 6 |