FFCP PHASE1:Hg19::chr7:84121891..84121902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |EntrezGene=10371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |HGNC=10723 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000448879_5end | |association_with_transcript=-26bp_to_ENST00000448879_5end | ||
|cluster_id=chr7:84121891..84121902,- | |||
|coexpression_cluster_id=C2002 | |coexpression_cluster_id=C2002 | ||
|description=CAGE_peak_22_at_SEMA3A_5end | |description=CAGE_peak_22_at_SEMA3A_5end | ||
|id=chr7:84121891..84121902,- | |id=chr7:84121891..84121902,- | ||
|ontology_enrichment_celltype=CL:0002620!5.77e-28!23;CL:0000057!1.68e-11!75;CL:0000064!2.20e-09!3;CL:0005012!2.20e-09!3;CL:0000067!2.20e-09!3;CL:0002304!2.20e-09!3;CL:0000153!6.19e-09!9;CL:0000447!6.19e-09!9;CL:0000667!8.11e-09!6;CL:0000058!8.11e-09!6;CL:0000138!8.11e-09!6;CL:0002549!4.51e-07!2 | |ontology_enrichment_celltype=CL:0002620!5.77e-28!23;CL:0000057!1.68e-11!75;CL:0000064!2.20e-09!3;CL:0005012!2.20e-09!3;CL:0000067!2.20e-09!3;CL:0002304!2.20e-09!3;CL:0000153!6.19e-09!9;CL:0000447!6.19e-09!9;CL:0000667!8.11e-09!6;CL:0000058!8.11e-09!6;CL:0000138!8.11e-09!6;CL:0002549!4.51e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.57e-28;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.09e-28,23;CL:0000057,6.40e-08,76 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.13e-11;1 | |||
|ontology_enrichment_disease=DOID:17!1.95e-10!5;DOID:450!1.95e-10!5;DOID:66!1.95e-10!5;DOID:423!1.95e-10!5;DOID:0080000!1.95e-10!5;DOID:11722!1.95e-10!5 | |ontology_enrichment_disease=DOID:17!1.95e-10!5;DOID:450!1.95e-10!5;DOID:66!1.95e-10!5;DOID:423!1.95e-10!5;DOID:0080000!1.95e-10!5;DOID:11722!1.95e-10!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!9.54e-19!40;UBERON:0002199!3.37e-18!45;UBERON:0002416!3.37e-18!45;UBERON:0000488!3.92e-12!4;UBERON:0001778!2.20e-09!3;UBERON:0001775!2.20e-09!3;UBERON:0002200!3.01e-09!11;UBERON:0006876!3.01e-09!11;UBERON:0003102!4.74e-09!95;UBERON:0002203!4.19e-08!6;UBERON:0001768!4.19e-08!6;UBERON:0002104!9.31e-08!21;UBERON:0003947!4.51e-07!2;UBERON:0005629!4.51e-07!2;UBERON:0005358!4.51e-07!2;UBERON:0001886!4.51e-07!2;UBERON:0004086!4.51e-07!2;UBERON:0005282!4.51e-07!2;UBERON:0005281!4.51e-07!2 | |ontology_enrichment_uberon=UBERON:0002097!9.54e-19!40;UBERON:0002199!3.37e-18!45;UBERON:0002416!3.37e-18!45;UBERON:0000488!3.92e-12!4;UBERON:0001778!2.20e-09!3;UBERON:0001775!2.20e-09!3;UBERON:0002200!3.01e-09!11;UBERON:0006876!3.01e-09!11;UBERON:0003102!4.74e-09!95;UBERON:0002203!4.19e-08!6;UBERON:0001768!4.19e-08!6;UBERON:0002104!9.31e-08!21;UBERON:0003947!4.51e-07!2;UBERON:0005629!4.51e-07!2;UBERON:0005358!4.51e-07!2;UBERON:0001886!4.51e-07!2;UBERON:0004086!4.51e-07!2;UBERON:0005282!4.51e-07!2;UBERON:0005281!4.51e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.13e-11;1!UBERON:0000941;1.13e-11;1!UBERON:0001785;1.13e-11;1!UBERON:0002464;1.13e-11;1!UBERON:0004904;1.13e-11;1!UBERON:0001021;1.13e-11;1!UBERON:0002097;3.26e-10;41!UBERON:0002199;1.62e-08;46!UBERON:0002416;1.62e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.81e-15,41;UBERON:0002199,1.08e-13,46;UBERON:0002416,1.08e-13,46;UBERON:0000941,9.61e-12,1;UBERON:0001785,9.61e-12,1;UBERON:0002464,9.61e-12,1;UBERON:0004904,9.61e-12,1;UBERON:0001021,9.61e-12,1;UBERON:0003902,9.61e-12,1;UBERON:0005425,9.61e-12,1 | |||
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| ||
|short_description=p22@SEMA3A | |short_description=p22@SEMA3A | ||
}} | }} |
Latest revision as of 19:47, 19 September 2015
Short description: | p22@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SEMA3A_5end |
Coexpression cluster: | C2002_synovial_adrenal_endometrial_gastric_Fibroblast_rectal_small |
Association with transcript: | -26bp_to_ENST00000448879_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.09e-28 | 23 |
fibroblast | 6.40e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.81e-15 | 41 |
integument | 1.08e-13 | 46 |
integumental system | 1.08e-13 | 46 |
cranial nerve II | 9.61e-12 | 1 |
cranial nerve | 9.61e-12 | 1 |
nerve trunk | 9.61e-12 | 1 |
nerve connecting eye with brain | 9.61e-12 | 1 |
nerve | 9.61e-12 | 1 |
retinal neural layer | 9.61e-12 | 1 |
presumptive neural retina | 9.61e-12 | 1 |