FFCP PHASE1:Hg19::chr7:83278284..83278319,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:83278284..83278319,-
|short_description=p4@SEMA3E
|description=CAGE_peak_4_at_SEMA3E_5end
|association_with_transcript=4bp_to_uc003uhy.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9723 | |EntrezGene=9723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10727 | |HGNC=10727 | ||
|TSSclassifier=strong | |||
|UniProt=O15041 | |UniProt=O15041 | ||
|association_with_transcript=4bp_to_uc003uhy.1_5end | |||
|cluster_id=chr7:83278284..83278319,- | |||
|coexpression_cluster_id=C1540 | |||
|description=CAGE_peak_4_at_SEMA3E_5end | |||
|id=chr7:83278284..83278319,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.28e-10;2!CL:0000174;2.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.44e-10,2;CL:0000174,2.60e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;8.04e-07;3!UBERON:0003353;8.04e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;7.01e-08;20 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.87e-13,143;DOID:305,7.12e-09,106;DOID:162,2.48e-08,235;DOID:14566,4.89e-08,239;DOID:1115,7.11e-08,20 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-31!115;UBERON:0003075!1.94e-23!86;UBERON:0007284!1.94e-23!86;UBERON:0001049!1.69e-22!57;UBERON:0005068!1.69e-22!57;UBERON:0006241!1.69e-22!57;UBERON:0007135!1.69e-22!57;UBERON:0002346!1.45e-21!90;UBERON:0005743!1.21e-20!86;UBERON:0002616!1.11e-19!59;UBERON:0003056!1.14e-19!61;UBERON:0003080!1.27e-18!42;UBERON:0001017!2.30e-18!82;UBERON:0002780!8.19e-18!41;UBERON:0001890!8.19e-18!41;UBERON:0006240!8.19e-18!41;UBERON:0000955!1.52e-17!69;UBERON:0006238!1.52e-17!69;UBERON:0000073!4.49e-17!94;UBERON:0001016!4.49e-17!94;UBERON:0000153!8.08e-16!129;UBERON:0007811!8.08e-16!129;UBERON:0002020!1.41e-15!34;UBERON:0003528!1.41e-15!34;UBERON:0001869!2.89e-15!32;UBERON:0000033!4.40e-15!123;UBERON:0001893!6.79e-14!34;UBERON:0002791!2.77e-13!33;UBERON:0004121!3.17e-13!169;UBERON:0000924!1.90e-12!173;UBERON:0006601!1.90e-12!173;UBERON:0000481!9.64e-12!347;UBERON:0000475!8.03e-11!365;UBERON:0002619!1.09e-10!22;UBERON:0000956!4.19e-10!25;UBERON:0000203!4.19e-10!25;UBERON:0001950!2.94e-09!20;UBERON:0000483!3.13e-09!309;UBERON:0000119!3.21e-09!312;UBERON:0000062!1.33e-08!511;UBERON:0002308!2.69e-07!9;UBERON:0000125!2.69e-07!9;UBERON:0000064!3.74e-07!219;UBERON:0000922!3.91e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.40e-07;3!UBERON:0001235;2.40e-07;3!UBERON:0006858;2.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.60e-07,3;UBERON:0001235,2.60e-07,3;UBERON:0006858,2.60e-07,3 | |||
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| ||
|short_description=p4@SEMA3E | |||
}} | }} |
Latest revision as of 19:30, 19 September 2015
Short description: | p4@SEMA3E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEMA3E_5end |
Coexpression cluster: | C1540_gastric_pharyngeal_mucinous_smallcell_transitionalcell_rhabdomyosarcoma_somatostatinoma |
Association with transcript: | 4bp_to_uc003uhy.1_5end |
EntrezGene: | SEMA3E |
HGNC: | 10727 |
UniProt: | O15041 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.44e-10 | 2 |
steroid hormone secreting cell | 2.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.60e-07 | 3 |
adrenal cortex | 2.60e-07 | 3 |
adrenal/interrenal gland | 2.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.87e-13 | 143 |
carcinoma | 7.12e-09 | 106 |
cancer | 2.48e-08 | 235 |
disease of cellular proliferation | 4.89e-08 | 239 |
sarcoma | 7.11e-08 | 20 |