FFCP PHASE1:Hg19::chr1:201617558..201617610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89796 | |EntrezGene=89796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |HGNC=15989 | ||
|TSSclassifier=strong | |||
|UniProt=A8MYI2,Q8NEY1 | |UniProt=A8MYI2,Q8NEY1 | ||
|association_with_transcript=108bp_to_ENST00000295624,ENST00000367297,ENST00000367300,ENST00000391966,NM_020443,uc001gwu.2_5end | |association_with_transcript=108bp_to_ENST00000295624,ENST00000367297,ENST00000367300,ENST00000391966,NM_020443,uc001gwu.2_5end | ||
|cluster_id=chr1:201617558..201617610,+ | |||
|description=CAGE_peak_4_at_NAV1_5end | |description=CAGE_peak_4_at_NAV1_5end | ||
|id=chr1:201617558..201617610,+ | |id=chr1:201617558..201617610,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.30e-39!180;CL:0000057!8.13e-21!75;CL:0000393!3.17e-15!60;CL:0000211!3.17e-15!60;CL:0000680!3.81e-14!57;CL:0000056!3.81e-14!57;CL:0000355!3.81e-14!57;CL:0000183!4.25e-13!59;CL:0000187!4.56e-13!54;CL:0000192!1.96e-10!42;CL:0000514!1.96e-10!42;CL:0002620!9.93e-10!23;CL:0000359!5.46e-08!32;CL:0002334!1.86e-07!12 | |ontology_enrichment_celltype=CL:0000055!8.30e-39!180;CL:0000057!8.13e-21!75;CL:0000393!3.17e-15!60;CL:0000211!3.17e-15!60;CL:0000680!3.81e-14!57;CL:0000056!3.81e-14!57;CL:0000355!3.81e-14!57;CL:0000183!4.25e-13!59;CL:0000187!4.56e-13!54;CL:0000192!1.96e-10!42;CL:0000514!1.96e-10!42;CL:0002620!9.93e-10!23;CL:0000359!5.46e-08!32;CL:0002334!1.86e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.77e-10;23!CL:0000057;7.59e-09;73!CL:0000393;8.51e-09;61!CL:0000211;8.51e-09;61!CL:0000192;1.41e-08;43!CL:0000187;2.09e-08;55!CL:0000359;4.87e-08;32!CL:0002334;7.10e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.67e-22,76;CL:0000393,2.53e-16,61;CL:0000211,2.53e-16,61;CL:0000680,3.59e-15,58;CL:0000056,3.59e-15,58;CL:0000355,3.59e-15,58;CL:0000187,5.06e-14,55;CL:0000192,1.65e-11,43;CL:0000514,1.65e-11,43;CL:0002620,2.91e-10,23;CL:0000359,2.07e-08,32;CL:0002334,7.66e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.41e-08;43!CL:0000355;2.29e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.62e-21!365;UBERON:0000468!1.92e-18!659;UBERON:0001017!3.89e-18!82;UBERON:0000073!1.85e-17!94;UBERON:0001016!1.85e-17!94;UBERON:0000914!2.19e-17!83;UBERON:0002329!2.19e-17!83;UBERON:0003077!2.19e-17!83;UBERON:0003059!2.19e-17!83;UBERON:0007282!2.19e-17!83;UBERON:0009618!2.19e-17!83;UBERON:0007285!2.19e-17!83;UBERON:0005743!6.97e-17!86;UBERON:0004290!1.09e-16!70;UBERON:0000119!1.37e-16!312;UBERON:0000483!1.81e-15!309;UBERON:0000924!1.69e-14!173;UBERON:0006601!1.69e-14!173;UBERON:0002385!4.44e-14!63;UBERON:0001015!4.44e-14!63;UBERON:0000383!4.44e-14!63;UBERON:0001134!4.62e-14!61;UBERON:0002036!4.62e-14!61;UBERON:0003082!4.62e-14!61;UBERON:0001049!5.03e-14!57;UBERON:0005068!5.03e-14!57;UBERON:0006241!5.03e-14!57;UBERON:0007135!5.03e-14!57;UBERON:0004121!6.10e-14!169;UBERON:0000486!7.11e-14!82;UBERON:0002616!1.63e-13!59;UBERON:0000955!2.28e-13!69;UBERON:0006238!2.28e-13!69;UBERON:0002346!3.55e-13!90;UBERON:0000481!5.12e-13!347;UBERON:0000467!8.70e-13!625;UBERON:0003075!1.19e-12!86;UBERON:0007284!1.19e-12!86;UBERON:0000480!1.57e-12!626;UBERON:0000477!2.50e-12!286;UBERON:0001869!8.81e-12!32;UBERON:0003080!1.16e-11!42;UBERON:0002020!1.19e-11!34;UBERON:0003528!1.19e-11!34;UBERON:0001893!2.28e-11!34;UBERON:0002780!2.80e-11!41;UBERON:0001890!2.80e-11!41;UBERON:0006240!2.80e-11!41;UBERON:0002791!4.08e-11!33;UBERON:0002619!4.52e-11!22;UBERON:0000033!4.76e-11!123;UBERON:0000922!8.37e-11!612;UBERON:0000025!1.73e-10!194;UBERON:0002050!3.21e-10!605;UBERON:0005423!3.21e-10!605;UBERON:0000956!3.52e-10!25;UBERON:0000203!3.52e-10!25;UBERON:0000923!4.16e-10!604;UBERON:0005291!4.16e-10!604;UBERON:0006598!4.16e-10!604;UBERON:0002532!4.16e-10!604;UBERON:0004111!4.96e-10!241;UBERON:0003056!4.97e-10!61;UBERON:0001950!5.28e-10!20;UBERON:0000153!8.55e-10!129;UBERON:0007811!8.55e-10!129;UBERON:0002199!1.04e-09!45;UBERON:0002416!1.04e-09!45;UBERON:0003102!6.83e-09!95;UBERON:0005256!4.52e-08!143;UBERON:0000064!1.12e-07!219;UBERON:0002097!2.35e-07!40;UBERON:0002049!3.20e-07!79;UBERON:0007798!3.20e-07!79;UBERON:0001637!3.57e-07!42;UBERON:0003509!3.57e-07!42;UBERON:0004572!3.57e-07!42;UBERON:0004872!7.97e-07!84 | |ontology_enrichment_uberon=UBERON:0000475!1.62e-21!365;UBERON:0000468!1.92e-18!659;UBERON:0001017!3.89e-18!82;UBERON:0000073!1.85e-17!94;UBERON:0001016!1.85e-17!94;UBERON:0000914!2.19e-17!83;UBERON:0002329!2.19e-17!83;UBERON:0003077!2.19e-17!83;UBERON:0003059!2.19e-17!83;UBERON:0007282!2.19e-17!83;UBERON:0009618!2.19e-17!83;UBERON:0007285!2.19e-17!83;UBERON:0005743!6.97e-17!86;UBERON:0004290!1.09e-16!70;UBERON:0000119!1.37e-16!312;UBERON:0000483!1.81e-15!309;UBERON:0000924!1.69e-14!173;UBERON:0006601!1.69e-14!173;UBERON:0002385!4.44e-14!63;UBERON:0001015!4.44e-14!63;UBERON:0000383!4.44e-14!63;UBERON:0001134!4.62e-14!61;UBERON:0002036!4.62e-14!61;UBERON:0003082!4.62e-14!61;UBERON:0001049!5.03e-14!57;UBERON:0005068!5.03e-14!57;UBERON:0006241!5.03e-14!57;UBERON:0007135!5.03e-14!57;UBERON:0004121!6.10e-14!169;UBERON:0000486!7.11e-14!82;UBERON:0002616!1.63e-13!59;UBERON:0000955!2.28e-13!69;UBERON:0006238!2.28e-13!69;UBERON:0002346!3.55e-13!90;UBERON:0000481!5.12e-13!347;UBERON:0000467!8.70e-13!625;UBERON:0003075!1.19e-12!86;UBERON:0007284!1.19e-12!86;UBERON:0000480!1.57e-12!626;UBERON:0000477!2.50e-12!286;UBERON:0001869!8.81e-12!32;UBERON:0003080!1.16e-11!42;UBERON:0002020!1.19e-11!34;UBERON:0003528!1.19e-11!34;UBERON:0001893!2.28e-11!34;UBERON:0002780!2.80e-11!41;UBERON:0001890!2.80e-11!41;UBERON:0006240!2.80e-11!41;UBERON:0002791!4.08e-11!33;UBERON:0002619!4.52e-11!22;UBERON:0000033!4.76e-11!123;UBERON:0000922!8.37e-11!612;UBERON:0000025!1.73e-10!194;UBERON:0002050!3.21e-10!605;UBERON:0005423!3.21e-10!605;UBERON:0000956!3.52e-10!25;UBERON:0000203!3.52e-10!25;UBERON:0000923!4.16e-10!604;UBERON:0005291!4.16e-10!604;UBERON:0006598!4.16e-10!604;UBERON:0002532!4.16e-10!604;UBERON:0004111!4.96e-10!241;UBERON:0003056!4.97e-10!61;UBERON:0001950!5.28e-10!20;UBERON:0000153!8.55e-10!129;UBERON:0007811!8.55e-10!129;UBERON:0002199!1.04e-09!45;UBERON:0002416!1.04e-09!45;UBERON:0003102!6.83e-09!95;UBERON:0005256!4.52e-08!143;UBERON:0000064!1.12e-07!219;UBERON:0002097!2.35e-07!40;UBERON:0002049!3.20e-07!79;UBERON:0007798!3.20e-07!79;UBERON:0001637!3.57e-07!42;UBERON:0003509!3.57e-07!42;UBERON:0004572!3.57e-07!42;UBERON:0004872!7.97e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.46e-12;22!UBERON:0001869;2.39e-11;32!UBERON:0002791;8.20e-11;32!UBERON:0003528;8.96e-11;34!UBERON:0002020;8.96e-11;34!UBERON:0000956;1.00e-10;25!UBERON:0000203;1.00e-10;25!UBERON:0001950;1.10e-10;20!UBERON:0001893;1.32e-10;34!UBERON:0002780;7.58e-09;41!UBERON:0001890;7.58e-09;41!UBERON:0000073;1.69e-07;53!UBERON:0002616;1.69e-07;53!UBERON:0002385;2.46e-07;31!UBERON:0001015;2.46e-07;31!UBERON:0000383;2.46e-07;31!UBERON:0001017;2.52e-07;75!UBERON:0002199;2.88e-07;46!UBERON:0002416;2.88e-07;46 | |||
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| ||
|short_description=p4@NAV1 | |short_description=p4@NAV1 | ||
}} | }} |
Latest revision as of 18:28, 19 September 2015
Short description: | p4@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENST00000295624, ENST00000367297, ENST00000367300, ENST00000391966, NM_020443, uc001gwu.2_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | A8MYI2Q8NEY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.67e-22 | 76 |
electrically responsive cell | 2.53e-16 | 61 |
electrically active cell | 2.53e-16 | 61 |
muscle precursor cell | 3.59e-15 | 58 |
myoblast | 3.59e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.59e-15 | 58 |
muscle cell | 5.06e-14 | 55 |
smooth muscle cell | 1.65e-11 | 43 |
smooth muscle myoblast | 1.65e-11 | 43 |
skin fibroblast | 2.91e-10 | 23 |
vascular associated smooth muscle cell | 2.07e-08 | 32 |
preadipocyte | 7.66e-08 | 12 |