FFCP PHASE1:Hg19::chr14:33408072..33408114,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64067 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19311 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-334bp_to_ENST00000346562_5end | |||
|cluster_id=chr14:33408072..33408114,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_NPAS3_5end | |||
|id=chr14:33408072..33408114,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.84e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.99e-40!82;UBERON:0005743!1.73e-39!86;UBERON:0000073!3.62e-39!94;UBERON:0001016!3.62e-39!94;UBERON:0001049!1.73e-38!57;UBERON:0005068!1.73e-38!57;UBERON:0006241!1.73e-38!57;UBERON:0007135!1.73e-38!57;UBERON:0007023!2.71e-37!115;UBERON:0000955!1.06e-35!69;UBERON:0006238!1.06e-35!69;UBERON:0002346!1.83e-35!90;UBERON:0003075!3.92e-35!86;UBERON:0007284!3.92e-35!86;UBERON:0002616!7.22e-34!59;UBERON:0000924!3.04e-31!173;UBERON:0006601!3.04e-31!173;UBERON:0004121!1.42e-30!169;UBERON:0003080!1.20e-29!42;UBERON:0002780!3.13e-29!41;UBERON:0001890!3.13e-29!41;UBERON:0006240!3.13e-29!41;UBERON:0000153!1.20e-27!129;UBERON:0007811!1.20e-27!129;UBERON:0000033!1.47e-27!123;UBERON:0003056!6.14e-26!61;UBERON:0002020!1.02e-24!34;UBERON:0003528!1.02e-24!34;UBERON:0001893!1.45e-24!34;UBERON:0002791!6.00e-24!33;UBERON:0001869!4.50e-23!32;UBERON:0000956!3.08e-18!25;UBERON:0000203!3.08e-18!25;UBERON:0002619!1.93e-16!22;UBERON:0000475!3.77e-16!365;UBERON:0000064!4.60e-15!219;UBERON:0001950!4.61e-15!20;UBERON:0000468!8.27e-14!659;UBERON:0000481!1.43e-12!347;UBERON:0000062!1.44e-12!511;UBERON:0000922!1.86e-11!612;UBERON:0000467!7.95e-11!625;UBERON:0000480!1.21e-10!626;UBERON:0002050!1.94e-10!605;UBERON:0005423!1.94e-10!605;UBERON:0000923!3.91e-10!604;UBERON:0005291!3.91e-10!604;UBERON:0006598!3.91e-10!604;UBERON:0002532!3.91e-10!604;UBERON:0003076!7.82e-10!15;UBERON:0003057!7.82e-10!15;UBERON:0000477!4.04e-09!286;UBERON:0000483!7.48e-09!309;UBERON:0000119!8.75e-09!312;UBERON:0004732!1.96e-08!13;UBERON:0002308!6.29e-08!9;UBERON:0000125!6.29e-08!9;UBERON:0002420!9.42e-08!9;UBERON:0007245!9.42e-08!9;UBERON:0010009!9.42e-08!9;UBERON:0010011!9.42e-08!9;UBERON:0000454!9.42e-08!9;UBERON:0004733!1.08e-07!12;UBERON:0002028!1.08e-07!12;UBERON:0007277!1.08e-07!12;UBERON:0002298!5.36e-07!8;UBERON:0000025!5.87e-07!194;UBERON:0004111!7.65e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.87e-32;34!UBERON:0002020;5.87e-32;34!UBERON:0001893;7.62e-32;34!UBERON:0002780;8.23e-32;41!UBERON:0001890;8.23e-32;41!UBERON:0002791;9.30e-32;32!UBERON:0001869;1.33e-31;32!UBERON:0000073;2.14e-30;53!UBERON:0002616;2.14e-30;53!UBERON:0000956;2.89e-27;25!UBERON:0000203;2.89e-27;25!UBERON:0002619;1.66e-24;22!UBERON:0001017;1.84e-23;75!UBERON:0000955;8.06e-23;68!UBERON:0001950;2.32e-22;20!UBERON:0001016;7.17e-20;83!UBERON:0007023;4.37e-15;114!UBERON:0000125;2.25e-11;9!UBERON:0002308;2.25e-11;9!UBERON:0004732;2.57e-11;13!UBERON:0002420;4.20e-11;9!UBERON:0007245;4.20e-11;9!UBERON:0010009;4.20e-11;9!UBERON:0010011;4.20e-11;9!UBERON:0000454;4.20e-11;9!UBERON:0004733;3.37e-10;12!UBERON:0002028;3.37e-10;12!UBERON:0009663;4.31e-09;7!UBERON:0000922;1.50e-08;49!UBERON:0001894;1.76e-08;7!UBERON:0011216;2.53e-08;132!UBERON:0001871;2.65e-08;6!UBERON:0002298;2.91e-08;6!UBERON:0000200;1.61e-07;6!UBERON:0002680;4.96e-07;9!UBERON:0001895;4.96e-07;9!UBERON:0000349;8.31e-07;5 | |||
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|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0.893922188854576,0,0,0.631719873426831,0,0,0,0.436882744260345,0.791300934685361,0,0.662794751455832,0,0,0,0,2.58554221961255,0.408001382488506,3.76145665773705,8.01460763966959,5.88560027813402,8.66244213204139,0,0,0,0,0,0.619264493264304,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0,0.144846518960824,0,1.94653948121054,4.15953195521899,2.88248216701333,4.0404001418838,2.75056058545197,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0.949265659568129,0,0,0,0,0,0,0.529636723252875,0.573673241497627,0.354668382198357,0,0,0,0.622422070799533,0,1.47115712802113,1.05950199351452,1.15235184896,0.234321431833797,0.312160076830321,0,0.597794722207204,0.23486899728753,0.485618833104395,0.561803226808994,0.408308342509787,0.368502951935304,2.78979609174567,2.37600571456411,0.247266929278557,0,0.718618141816238,0.336672227908132,1.00094815897571,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,0,0.358779271377724,1.49490172172997,0.423863802319124,0,0.206105058476878,2.06112432036503,0.558350568994769,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,1.06502877754984,0.403008392910561,0,0,0,0,0.609868530647977,0.662648841607426,0.348581828608555,1.14027160516907,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0,0.482022059766964,0.661763836394364,0.217879444092406,0,0.269662616320329,0.196221465125346,0,1.4763109092493,0,0.8231480226628,2.94017422771084,0,0,1.18157981336281,0,0.122988438543114,0.857839051492628,0.109750285408626,0,0,0,0.651616610620649,0,2.88662684050547,1.97081688457631,1.17408694235822,0.433099343283221,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0.87192013766656,0,0.775630294546667,3.57656445851882,0.845302752556,1.06375246633948,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.699810938274399,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,5.08189248444927,1.30139853857622,0.773288812777695,1.84267891867784,1.27587750330633,0,0,0,0.736148950314839,0,0.813795071099207,1.03985430765404,1.24900292158013,1.73472656537328,0.234282829985426,0,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,1.66435439510497,0,0.496215615637554,1.84154367945675,0.280660094433074,0.640695746278505,0.511707249066704,0.804269605718038,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0,0.0920809889358963,0.229628896329213,2.1850940160806,2.49136388422906,0,0.385076685522074,0.784349769176855,0,0.633309773357254,0,0.340187410553031,0.215915916102139,3.08454505380579,1.08378575017541,0,0,0.831076008928724,0.447749509444357,0,0,0.512900250232778,0.656029291399411,0,0.721287081534056,1.09883357782012,0.660075999364704,0,0.650060246036521,0,0.48335359146061,0.462145851343933,0.460511024178389,0.413509717453592,0.859361958946189,2.32026710262766,0.511359764496605,0.801288320820636,0.165284915360978,0.192190067365106,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0,0.706874414074119,0,0,0,0,0,0,0.9554993798559,0.424216295861138,0,0.551365343546124,0,0,0,0.655894752046633,0,0.6196469961995,0,0,0.0982490410131212,0,2.12856638442359,0.211107635297664,0,0.379473173765715,1.74967360122491,0,0,1.08890984861323,0.847294206991012,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,2.4906390476222,2.18448939149124,0,0.852408440419239,2.14870036263921,2.37571744666111,0.307160702099232,9.94147647766298,12.3789086441251,0.333926115068718,0.16480387422676,9.28951795763171,2.39097585901284,3.86797481743607,10.077309914171,6.85200172764437,0,0.311039587661807,0,0.179021174675609,0,1.67693789582787,0,0,5.81599647657131,7.79252024559551,5.98841394003583,3.1251331330228,1.31189999994294,2.89999830173917,0,0,0,0,2.62444152044929,0.173624994933292,17.7148277162768,10.4918901604105,3.05163472634166,5.52896299656123,2.36438095162838,3.94893714877151,0,0,5.61736887077719,0.113942055847001,0,0.0897576444097721,0.325942115766024,1.27600463892768,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,5.97157158647103,2.74218449960351,6.11030144933625,0.889563386041866,0.123563938946503,0.626531697032732,21.500961420836,4.81546588379273,10.5419000576403,0,0.19566461893209,0.2427803795340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| |||
|short_description=p2@NPAS3 | |||
}} |
Latest revision as of 18:12, 19 September 2015
Short description: | p2@NPAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPAS3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -334bp_to_ENST00000346562_5end |
EntrezGene: | NPAS3 |
HGNC: | 19311 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data