FFCP PHASE1:Hg19::chr11:6704513..6704578,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14053 | |||
|TSSclassifier=strong | |||
|UniProt=E9PKV2 | |||
|association_with_transcript=0bp_to_ENST00000529958,ENST00000532203_5end | |||
|cluster_id=chr11:6704513..6704578,- | |||
|coexpression_cluster_id=C2157 | |||
|description=CAGE_peak_1_at_MRPL17_5end | |||
|id=chr11:6704513..6704578,- | |||
|ontology_enrichment_celltype=CL:0000548!1.61e-30!679;CL:0000004!1.61e-30!679;CL:0000255!1.61e-30!679;CL:0000222!7.93e-30!119;CL:0000012!1.80e-29!682;CL:0000220!4.82e-29!246;CL:0002321!5.04e-29!248;CL:0000055!6.33e-25!180;CL:0000183!1.78e-20!59;CL:0000066!5.04e-20!254;CL:0000680!8.96e-20!57;CL:0000056!8.96e-20!57;CL:0000355!8.96e-20!57;CL:0000187!1.07e-18!54;CL:0000144!1.14e-18!625;CL:0000192!4.24e-17!42;CL:0000514!4.24e-17!42;CL:0000393!4.84e-17!60;CL:0000211!4.84e-17!60;CL:0000003!8.46e-17!722;CL:0002371!8.65e-17!591;CL:0000359!2.02e-14!32;CL:0000115!3.80e-10!35;CL:0000213!6.20e-10!57;CL:0000215!6.20e-10!57;CL:0002078!1.11e-09!44;CL:0002139!2.66e-08!24;CL:0000063!5.00e-08!578;CL:0000076!5.26e-08!62;CL:0000071!1.20e-07!18;CL:0002546!1.20e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.29e-13;32!CL:0000192;5.42e-12;43!CL:0000187;7.12e-11;55!CL:0000115;3.68e-09;36!CL:0000393;2.52e-08;61!CL:0000211;2.52e-08;61!CL:0002139;2.57e-08;24!CL:0000071;1.14e-07;18!CL:0002078;5.47e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.11e-30,121;CL:0002321,2.49e-29,250;CL:0000066,3.37e-20,253;CL:0000680,2.99e-19,58;CL:0000056,2.99e-19,58;CL:0000355,2.99e-19,58;CL:0000187,3.56e-18,55;CL:0000393,1.35e-16,61;CL:0000211,1.35e-16,61;CL:0000192,1.64e-16,43;CL:0000514,1.64e-16,43;CL:0000359,2.02e-14,32;CL:0000115,1.07e-10,36;CL:0000213,2.05e-10,58;CL:0000215,2.05e-10,58;CL:0002078,3.44e-10,45;CL:0002139,2.66e-08,24;CL:0000076,6.39e-08,63;CL:0000071,1.20e-07,18;CL:0002546,1.20e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;5.42e-12;43!CL:0000355;1.04e-10;58!CL:0000222;1.63e-08;121!CL:0002546;1.14e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.04e-21!79;UBERON:0007798!3.04e-21!79;UBERON:0004290!1.93e-20!70;UBERON:0000486!7.53e-20!82;UBERON:0000490!8.16e-20!138;UBERON:0000914!4.16e-19!83;UBERON:0002329!4.16e-19!83;UBERON:0003077!4.16e-19!83;UBERON:0003059!4.16e-19!83;UBERON:0007282!4.16e-19!83;UBERON:0009618!4.16e-19!83;UBERON:0007285!4.16e-19!83;UBERON:0000055!1.03e-18!69;UBERON:0005256!1.28e-18!143;UBERON:0004872!3.28e-18!84;UBERON:0003914!6.60e-18!118;UBERON:0001134!1.64e-17!61;UBERON:0002036!1.64e-17!61;UBERON:0003082!1.64e-17!61;UBERON:0001981!4.00e-17!60;UBERON:0007500!4.00e-17!60;UBERON:0004537!4.00e-17!60;UBERON:0006965!4.00e-17!60;UBERON:0002385!5.82e-16!63;UBERON:0001015!5.82e-16!63;UBERON:0000383!5.82e-16!63;UBERON:0001637!2.85e-15!42;UBERON:0003509!2.85e-15!42;UBERON:0004572!2.85e-15!42;UBERON:0003104!1.98e-14!238;UBERON:0009142!1.98e-14!238;UBERON:0002100!1.12e-13!216;UBERON:0004535!2.49e-13!110;UBERON:0001009!6.40e-13!113;UBERON:0004573!1.25e-10!33;UBERON:0004571!1.25e-10!33;UBERON:0000119!3.47e-10!312;UBERON:0000483!1.21e-09!309;UBERON:0001986!1.20e-07!18;UBERON:0004638!1.20e-07!18;UBERON:0004852!1.20e-07!18;UBERON:0000487!2.04e-07!22;UBERON:0000481!2.38e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.09e-11;42!UBERON:0003509;7.09e-11;42!UBERON:0004572;7.09e-11;42!UBERON:0007500;7.59e-11;56!UBERON:0001981;7.59e-11;56!UBERON:0004537;7.59e-11;56!UBERON:0003914;2.20e-10;74!UBERON:0002049;1.29e-09;75!UBERON:0007798;1.29e-09;75!UBERON:0004573;1.48e-09;33!UBERON:0004571;1.48e-09;33!UBERON:0000055;1.87e-09;65!UBERON:0004638;1.14e-07;18!UBERON:0001986;1.14e-07;18!UBERON:0004852;1.14e-07;18!UBERON:0000487;1.97e-07;22!UBERON:0000490;3.00e-07;33!UBERON:0000353;9.68e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.20e-23,78;UBERON:0000490,2.14e-22,148;UBERON:0002049,3.74e-21,78;UBERON:0007798,3.74e-21,78;UBERON:0002329,5.56e-20,71;UBERON:0003059,5.56e-20,71;UBERON:0007282,5.56e-20,71;UBERON:0004290,5.56e-20,71;UBERON:0009618,5.56e-20,71;UBERON:0000486,1.88e-19,83;UBERON:0007524,3.07e-19,73;UBERON:0003077,3.26e-19,72;UBERON:0007285,3.26e-19,72;UBERON:0000055,1.25e-18,68;UBERON:0003914,3.44e-18,117;UBERON:0004872,4.17e-18,83;UBERON:0005256,1.81e-17,122;UBERON:0003104,4.40e-17,160;UBERON:0009142,4.40e-17,160;UBERON:0001134,4.62e-17,62;UBERON:0002036,4.62e-17,62;UBERON:0003082,4.62e-17,62;UBERON:0007500,4.79e-17,59;UBERON:0001981,4.79e-17,59;UBERON:0004537,4.79e-17,59;UBERON:0006965,4.79e-17,59;UBERON:0002385,1.48e-15,64;UBERON:0001015,1.48e-15,64;UBERON:0000383,1.48e-15,64;UBERON:0001637,2.85e-15,42;UBERON:0003509,2.85e-15,42;UBERON:0004572,2.85e-15,42;UBERON:0002100,1.88e-14,199;UBERON:0004535,3.27e-13,109;UBERON:0001009,8.41e-13,112;UBERON:0004573,1.25e-10,33;UBERON:0004571,1.25e-10,33;UBERON:0000119,1.36e-10,309;UBERON:0000483,4.88e-10,306;UBERON:0004638,1.20e-07,18;UBERON:0001986,1.20e-07,18;UBERON:0004852,1.20e-07,18;UBERON:0000487,2.04e-07,22;UBERON:0000353,9.45e-07,15 | |||
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| |||
|short_description=p1@MRPL17 | |||
}} |
Latest revision as of 17:05, 19 September 2015
Short description: | p1@MRPL17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL17_5end |
Coexpression cluster: | C2157_Mallassezderived_Smooth_Alveolar_Bronchial_Keratocytes_Tracheal_mesothelioma |
Association with transcript: | 0bp_to_ENST00000529958, ENST00000532203_5end |
EntrezGene: | MRPL17 |
HGNC: | 14053 |
UniProt: | E9PKV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.11e-30 | 121 |
embryonic cell | 2.49e-29 | 250 |
epithelial cell | 3.37e-20 | 253 |
muscle precursor cell | 2.99e-19 | 58 |
myoblast | 2.99e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.99e-19 | 58 |
muscle cell | 3.56e-18 | 55 |
electrically responsive cell | 1.35e-16 | 61 |
electrically active cell | 1.35e-16 | 61 |
smooth muscle cell | 1.64e-16 | 43 |
smooth muscle myoblast | 1.64e-16 | 43 |
vascular associated smooth muscle cell | 2.02e-14 | 32 |
endothelial cell | 1.07e-10 | 36 |
lining cell | 2.05e-10 | 58 |
barrier cell | 2.05e-10 | 58 |
meso-epithelial cell | 3.44e-10 | 45 |
endothelial cell of vascular tree | 2.66e-08 | 24 |
squamous epithelial cell | 6.39e-08 | 63 |
blood vessel endothelial cell | 1.20e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.20e-07 | 18 |