FFCP PHASE1:Hg19::chr1:201159914..201159958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91156 | |EntrezGene=91156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24607 | |HGNC=24607 | ||
|TSSclassifier=strong | |||
|UniProt=B7WP51,F8WAI1,Q86VF2 | |UniProt=B7WP51,F8WAI1,Q86VF2 | ||
|association_with_transcript=0bp_to_ENST00000295591,ENST00000335211,ENST00000437879,ENST00000451870,NM_001164586,uc001gwb.2_5end | |association_with_transcript=0bp_to_ENST00000295591,ENST00000335211,ENST00000437879,ENST00000451870,NM_001164586,uc001gwb.2_5end | ||
|cluster_id=chr1:201159914..201159958,+ | |||
|coexpression_cluster_id=C1256 | |||
|description=CAGE_peak_1_at_IGFN1_5end | |description=CAGE_peak_1_at_IGFN1_5end | ||
|id=chr1:201159914..201159958,+ | |id=chr1:201159914..201159958,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;3.27e-10;6!CL:0002255;3.27e-10;6!CL:0000056;6.76e-10;4!CL:0000515;6.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,3.41e-10,6;CL:0002255,3.41e-10,6;CL:0000515,6.25e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.00e-12;5!CL:0000515;6.76e-10;4 | |||
|ontology_enrichment_disease=DOID:120!6.51e-09!27;DOID:0050687!4.50e-08!143;DOID:193!6.81e-08!29;DOID:14566!3.44e-07!239;DOID:162!5.17e-07!235 | |ontology_enrichment_disease=DOID:120!6.51e-09!27;DOID:0050687!4.50e-08!143;DOID:193!6.81e-08!29;DOID:14566!3.44e-07!239;DOID:162!5.17e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3001;3.27e-10;6!DOID:120;3.30e-10;27!DOID:193;2.59e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.41e-10,6;DOID:120,3.42e-10,27;DOID:193,2.67e-09,29;DOID:162,5.05e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.00e-12;5!UBERON:0001134;1.25e-08;16!UBERON:0002036;1.25e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.32e-12,5;UBERON:0004117,3.32e-12,5;UBERON:0007689,3.32e-12,5;UBERON:0007123,3.32e-12,5;UBERON:0003091,3.32e-12,5 | |||
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| ||
|short_description=p1@IGFN1 | |short_description=p1@IGFN1 | ||
}} | }} |
Latest revision as of 17:02, 19 September 2015
Short description: | p1@IGFN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGFN1_5end |
Coexpression cluster: | C1256_mesothelioma_leiomyoblastoma_diaphragm_skeletal_renal_endometrial_clear |
Association with transcript: | 0bp_to_ENST00000295591, ENST00000335211, ENST00000437879, ENST00000451870, NM_001164586, uc001gwb.2_5end |
EntrezGene: | IGFN1 |
HGNC: | 24607 |
UniProt: | B7WP51F8WAI1Q86VF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.41e-10 | 6 |
stromal cell of endometrium | 3.41e-10 | 6 |
skeletal muscle myoblast | 6.25e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.32e-12 | 5 |
pharyngeal pouch | 3.32e-12 | 5 |
thyroid diverticulum | 3.32e-12 | 5 |
pharyngeal pouch 2 | 3.32e-12 | 5 |
thyroid primordium | 3.32e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.41e-10 | 6 |
female reproductive organ cancer | 3.42e-10 | 27 |
reproductive organ cancer | 2.67e-09 | 29 |
cancer | 5.05e-07 | 235 |