FFCP PHASE1:Hg19::chr6:72926685..72926703,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:72926685..72926703,+
|short_description=p18@RIMS1
|description=CAGE_peak_18_at_RIMS1_5end
|association_with_transcript=222bp_to_ENST00000517827,ENST0000052...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3S3,B7Z2Q9,B7Z9Z3,Q3ZCW0 | |UniProt=B7Z3S3,B7Z2Q9,B7Z9Z3,Q3ZCW0 | ||
|association_with_transcript=222bp_to_ENST00000517827,ENST00000524197,NM_001168410,uc010kas.1,uc011dyd.1_5end | |||
|cluster_id=chr6:72926685..72926703,+ | |||
|coexpression_cluster_id=C247 | |||
|description=CAGE_peak_18_at_RIMS1_5end | |||
|id=chr6:72926685..72926703,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.04e-72!57;UBERON:0005068!6.04e-72!57;UBERON:0006241!6.04e-72!57;UBERON:0007135!6.04e-72!57;UBERON:0001950!2.76e-63!20;UBERON:0005743!1.99e-61!86;UBERON:0001017!2.28e-60!82;UBERON:0002616!4.48e-59!59;UBERON:0000955!5.28e-58!69;UBERON:0006238!5.28e-58!69;UBERON:0002619!1.61e-57!22;UBERON:0000073!3.10e-55!94;UBERON:0001016!3.10e-55!94;UBERON:0003075!8.51e-54!86;UBERON:0007284!8.51e-54!86;UBERON:0002020!4.38e-53!34;UBERON:0003528!4.38e-53!34;UBERON:0002346!3.35e-51!90;UBERON:0001869!1.18e-50!32;UBERON:0000956!1.57e-50!25;UBERON:0000203!1.57e-50!25;UBERON:0002780!5.72e-49!41;UBERON:0001890!5.72e-49!41;UBERON:0006240!5.72e-49!41;UBERON:0003080!9.71e-48!42;UBERON:0001893!1.47e-47!34;UBERON:0007023!1.01e-45!115;UBERON:0002791!3.73e-43!33;UBERON:0000200!3.14e-37!6;UBERON:0000033!6.80e-36!123;UBERON:0003056!1.99e-35!61;UBERON:0000153!5.26e-34!129;UBERON:0007811!5.26e-34!129;UBERON:0004121!8.63e-29!169;UBERON:0000924!5.19e-28!173;UBERON:0006601!5.19e-28!173;UBERON:0002298!5.17e-27!8;UBERON:0003076!8.26e-25!15;UBERON:0003057!8.26e-25!15;UBERON:0001872!1.35e-20!5;UBERON:0002021!2.11e-20!5;UBERON:0002771!2.75e-19!3;UBERON:0000988!5.11e-19!3;UBERON:0001896!6.14e-19!3;UBERON:0005290!6.14e-19!3;UBERON:0010096!6.14e-19!3;UBERON:0004733!7.50e-18!12;UBERON:0002028!7.50e-18!12;UBERON:0007277!7.50e-18!12;UBERON:0000025!9.22e-18!194;UBERON:0004732!1.94e-16!13;UBERON:0004111!2.79e-13!241;UBERON:0001870!2.81e-13!2;UBERON:0002148!7.50e-13!2;UBERON:0009662!7.50e-13!2;UBERON:0001871!1.74e-12!7;UBERON:0000477!2.06e-11!286;UBERON:0000064!2.96e-11!219;UBERON:0000483!3.49e-11!309;UBERON:0000119!5.05e-11!312;UBERON:0000475!1.78e-10!365;UBERON:0002240!5.29e-09!3;UBERON:0006331!7.30e-09!3;UBERON:0007190!7.50e-08!1;UBERON:0002581!1.10e-07!1;UBERON:0002902!1.18e-07!1;UBERON:0009899!1.18e-07!1;UBERON:0002702!1.25e-07!1;UBERON:0002022!2.83e-07!1;UBERON:0001882!3.40e-07!1;UBERON:0005403!3.40e-07!1;UBERON:0003112!3.84e-07!1;UBERON:0000032!3.84e-07!1;UBERON:0005253!3.84e-07!1;UBERON:0003128!3.84e-07!1;UBERON:0002241!3.84e-07!1;UBERON:0001703!3.84e-07!1;UBERON:0004761!3.84e-07!1;UBERON:0009617!3.84e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007190;2.37e-29;1!UBERON:0001872;1.81e-23;5!UBERON:0001950;5.48e-22;20!UBERON:0002619;3.94e-20;22!UBERON:0002298;6.48e-20;6!UBERON:0001869;6.99e-20;32!UBERON:0000200;9.49e-20;6!UBERON:0001893;1.08e-19;34!UBERON:0000956;7.03e-18;25!UBERON:0000203;7.03e-18;25!UBERON:0002702;2.05e-15;2!UBERON:0002791;6.15e-15;32!UBERON:0000073;5.58e-14;53!UBERON:0002616;5.58e-14;53!UBERON:0002780;8.97e-14;41!UBERON:0001890;8.97e-14;41!UBERON:0003528;2.67e-11;34!UBERON:0002020;2.67e-11;34!UBERON:0000988;6.73e-11;3!UBERON:0001896;9.90e-11;3!UBERON:0001870;9.90e-11;3!UBERON:0005290;9.90e-11;3!UBERON:0004733;1.76e-10;12!UBERON:0002028;1.76e-10;12!UBERON:0004732;9.51e-10;13!UBERON:0000955;7.17e-08;68!UBERON:0002021;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007190,1.33e-29,1;UBERON:0000073,8.37e-26,53;UBERON:0002616,8.37e-26,53;UBERON:0001049,1.82e-24,56;UBERON:0005068,1.82e-24,56;UBERON:0006241,1.82e-24,56;UBERON:0007135,1.82e-24,56;UBERON:0001872,2.02e-23,5;UBERON:0001950,6.45e-22,20;UBERON:0001869,1.12e-21,32;UBERON:0001893,1.83e-20,34;UBERON:0002619,4.57e-20,22;UBERON:0000955,5.48e-20,68;UBERON:0006238,5.48e-20,68;UBERON:0002298,5.89e-20,6;UBERON:0000200,9.49e-20,6;UBERON:0000956,8.02e-18,25;UBERON:0000203,8.02e-18,25;UBERON:0002780,3.96e-17,41;UBERON:0001890,3.96e-17,41;UBERON:0003080,3.96e-17,41;UBERON:0006240,3.96e-17,41;UBERON:0001017,6.63e-17,81;UBERON:0003075,6.63e-17,82;UBERON:0007284,6.63e-17,82;UBERON:0002346,3.85e-16,86;UBERON:0002702,2.74e-15,2;UBERON:0001016,2.81e-15,89;UBERON:0002791,3.65e-14,32;UBERON:0010371,2.04e-13,104;UBERON:0003528,2.19e-13,34;UBERON:0002020,2.19e-13,34;UBERON:0003056,1.00e-11,61;UBERON:0000988,6.73e-11,3;UBERON:0001896,8.99e-11,3;UBERON:0005290,8.99e-11,3;UBERON:0010096,8.99e-11,3;UBERON:0001870,1.20e-10,3;UBERON:0010314,1.24e-10,132;UBERON:0004733,1.68e-10,12;UBERON:0002028,1.68e-10,12;UBERON:0007277,1.68e-10,12;UBERON:0004732,9.10e-10,13;UBERON:0007023,3.44e-09,114;UBERON:0003076,1.37e-08,15;UBERON:0003057,1.37e-08,15;UBERON:0004121,3.72e-08,171;UBERON:0000924,3.72e-08,171;UBERON:0006601,3.72e-08,171;UBERON:0000025,2.32e-07,192;UBERON:0002021,5.08e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.001527445652,0.573409195690071,0.110929051536852,1.24192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,2.8339315265117,0.638535436228605,0.615349092722265,0,0.899044282034833,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68843961545987,0.781078098613847,1.2401207790071,1.07806877329642,0,0,0,0,0,0,0,0,0,0,0,0,4.89382077433188,0.920818829879887,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.001527445652,0.573409195690071,0.110929051536852,1.24192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,2.8339315265117,0.638535436228605,0.615349092722265,0,0.899044282034833,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68843961545987,0.781078098613847,1.2401207790071,1.07806877329642,0,0,0,0,0,0,0,0,0,0,0,0,4.89382077433188,0.920818829879887,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@RIMS1 | |||
}} | }} |
Latest revision as of 16:47, 19 September 2015
Short description: | p18@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RIMS1_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | 222bp_to_ENST00000517827, ENST00000524197, NM_001168410, uc010kas.1, uc011dyd.1_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | B7Z3S3B7Z2Q9B7Z9Z3Q3ZCW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data