FFCP PHASE1:Hg19::chr6:107811746..107811766,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:107811746..107811766,+ to FFCP PHASE1:Hg19::chr6:107811746..107811766,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55084 | |EntrezGene=55084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29256 | |HGNC=29256 | ||
|TSSclassifier=strong | |||
|UniProt=A7XYQ1,Q24K27 | |UniProt=A7XYQ1,Q24K27 | ||
|association_with_transcript=429bp_to_NM_018013,uc003prw.1,uc003prx.2_5end | |||
|cluster_id=chr6:107811746..107811766,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_12_at_SOBP_5end | |||
|id=chr6:107811746..107811766,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.77e-07;1!CL:0002625;5.77e-07;1!CL:0000216;5.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.57e-07,1;CL:0002625,4.57e-07,1;CL:0000216,4.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.64e-09;82!UBERON:0004874;5.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.59e-48!115;UBERON:0001049!7.72e-35!57;UBERON:0005068!7.72e-35!57;UBERON:0006241!7.72e-35!57;UBERON:0007135!7.72e-35!57;UBERON:0001017!3.42e-34!82;UBERON:0000955!9.14e-34!69;UBERON:0006238!9.14e-34!69;UBERON:0005743!2.96e-33!86;UBERON:0000073!7.02e-32!94;UBERON:0001016!7.02e-32!94;UBERON:0002616!4.69e-31!59;UBERON:0003080!5.83e-28!42;UBERON:0001893!6.91e-28!34;UBERON:0002020!3.50e-27!34;UBERON:0003528!3.50e-27!34;UBERON:0002780!6.34e-27!41;UBERON:0001890!6.34e-27!41;UBERON:0006240!6.34e-27!41;UBERON:0002791!1.18e-26!33;UBERON:0002346!4.49e-26!90;UBERON:0001869!6.73e-26!32;UBERON:0003075!1.94e-24!86;UBERON:0007284!1.94e-24!86;UBERON:0001950!2.30e-24!20;UBERON:0002619!4.19e-24!22;UBERON:0000956!2.38e-20!25;UBERON:0000203!2.38e-20!25;UBERON:0000153!3.88e-18!129;UBERON:0007811!3.88e-18!129;UBERON:0003056!9.20e-18!61;UBERON:0000033!3.07e-17!123;UBERON:0000025!2.63e-15!194;UBERON:0004111!1.34e-14!241;UBERON:0000924!2.70e-14!173;UBERON:0006601!2.70e-14!173;UBERON:0004121!4.14e-13!169;UBERON:0000477!8.18e-13!286;UBERON:0000483!2.93e-12!309;UBERON:0000119!6.93e-12!312;UBERON:0000475!4.62e-10!365;UBERON:0002298!4.35e-09!8;UBERON:0002420!5.81e-09!9;UBERON:0007245!5.81e-09!9;UBERON:0010009!5.81e-09!9;UBERON:0010011!5.81e-09!9;UBERON:0000454!5.81e-09!9;UBERON:0000200!6.14e-09!6;UBERON:0000481!6.38e-09!347;UBERON:0001871!1.61e-08!7;UBERON:0000922!2.31e-08!612;UBERON:0002308!2.99e-08!9;UBERON:0000125!2.99e-08!9;UBERON:0003076!4.51e-08!15;UBERON:0003057!4.51e-08!15;UBERON:0001872!8.38e-08!5;UBERON:0000923!8.69e-08!604;UBERON:0005291!8.69e-08!604;UBERON:0006598!8.69e-08!604;UBERON:0002532!8.69e-08!604;UBERON:0002021!9.94e-08!5;UBERON:0002050!1.03e-07!605;UBERON:0005423!1.03e-07!605;UBERON:0000468!2.74e-07!659;UBERON:0004733!4.11e-07!12;UBERON:0002028!4.11e-07!12;UBERON:0007277!4.11e-07!12;UBERON:0000467!5.26e-07!625;UBERON:0000480!6.21e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.11e-87;22!UBERON:0001950;2.94e-86;20!UBERON:0001869;5.98e-77;32!UBERON:0000956;7.43e-77;25!UBERON:0000203;7.43e-77;25!UBERON:0001893;1.27e-71;34!UBERON:0002791;8.14e-71;32!UBERON:0003528;2.44e-64;34!UBERON:0002020;2.44e-64;34!UBERON:0002780;1.19e-48;41!UBERON:0001890;1.19e-48;41!UBERON:0000073;8.25e-32;53!UBERON:0002616;8.25e-32;53!UBERON:0001872;2.28e-29;5!UBERON:0002021;8.20e-29;5!UBERON:0000200;1.15e-24;6!UBERON:0001017;1.27e-22;75!UBERON:0000955;8.19e-22;68!UBERON:0001871;1.51e-20;6!UBERON:0001016;1.27e-16;83!UBERON:0000369;2.76e-13;4!UBERON:0002435;2.76e-13;4!UBERON:0000204;2.76e-13;4!UBERON:0002771;1.13e-12;2!UBERON:0000349;9.85e-11;5!UBERON:0002420;3.18e-10;9!UBERON:0007245;3.18e-10;9!UBERON:0010009;3.18e-10;9!UBERON:0010011;3.18e-10;9!UBERON:0000454;3.18e-10;9!UBERON:0001870;5.25e-09;3!UBERON:0011216;8.69e-09;132!UBERON:0007023;1.10e-08;114!UBERON:0005383;1.81e-08;3!UBERON:0005382;1.81e-08;3!UBERON:0009663;8.44e-08;7!UBERON:0002022;1.54e-07;1!UBERON:0002581;2.23e-07;1!UBERON:0007190;2.23e-07;1!UBERON:0002902;5.77e-07;1!UBERON:0001882;5.77e-07;1!UBERON:0001874;5.77e-07;1!UBERON:0003112;5.77e-07;1!UBERON:0000989;5.77e-07;1!UBERON:0001136;5.77e-07;1!UBERON:0001343;5.77e-07;1!UBERON:0008811;5.77e-07;1!UBERON:0011158;5.77e-07;1!UBERON:0009899;5.77e-07;1!UBERON:0004910;5.77e-07;1!UBERON:0004813;5.77e-07;1!UBERON:0003128;5.77e-07;1!UBERON:0005403;5.77e-07;1!UBERON:0001703;5.77e-07;1!UBERON:0002241;5.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.06e-87,32;UBERON:0002619,8.42e-87,22;UBERON:0001950,1.59e-85,20;UBERON:0001893,2.02e-82,34;UBERON:0002791,7.25e-80,32;UBERON:0000956,2.52e-76,25;UBERON:0000203,2.52e-76,25;UBERON:0003528,4.84e-75,34;UBERON:0002020,4.84e-75,34;UBERON:0002780,6.80e-68,41;UBERON:0001890,6.80e-68,41;UBERON:0003080,6.80e-68,41;UBERON:0006240,6.80e-68,41;UBERON:0000073,8.51e-57,53;UBERON:0002616,8.51e-57,53;UBERON:0001049,1.51e-53,56;UBERON:0005068,1.51e-53,56;UBERON:0006241,1.51e-53,56;UBERON:0007135,1.51e-53,56;UBERON:0000955,1.01e-50,68;UBERON:0006238,1.01e-50,68;UBERON:0001017,1.92e-45,81;UBERON:0003056,1.89e-44,61;UBERON:0001016,1.80e-40,89;UBERON:0003075,3.26e-35,82;UBERON:0007284,3.26e-35,82;UBERON:0002346,2.30e-33,86;UBERON:0001872,4.38e-29,5;UBERON:0002021,9.30e-29,5;UBERON:0010371,8.76e-27,104;UBERON:0007023,1.53e-26,114;UBERON:0000200,2.08e-24,6;UBERON:0010314,4.75e-22,132;UBERON:0011216,3.71e-20,223;UBERON:0001871,4.21e-20,6;UBERON:0004121,7.96e-19,171;UBERON:0000924,7.96e-19,171;UBERON:0006601,7.96e-19,171;UBERON:0000025,2.28e-16,192;UBERON:0000369,3.01e-13,4;UBERON:0002435,3.01e-13,4;UBERON:0000204,3.01e-13,4;UBERON:0010082,3.01e-13,4;UBERON:0004111,3.31e-13,240;UBERON:0002771,2.57e-12,2;UBERON:0000349,8.64e-11,5;UBERON:0002420,3.44e-10,9;UBERON:0007245,3.44e-10,9;UBERON:0010009,3.44e-10,9;UBERON:0010011,3.44e-10,9;UBERON:0000454,3.44e-10,9;UBERON:0000483,4.37e-10,306;UBERON:0000119,6.23e-10,309;UBERON:0001870,4.32e-09,3;UBERON:0005383,1.96e-08,3;UBERON:0005382,1.96e-08,3;UBERON:0009663,8.87e-08,7;UBERON:0002022,1.55e-07,1;UBERON:0002581,2.23e-07,1;UBERON:0007190,2.37e-07,1;UBERON:0000989,3.20e-07,1;UBERON:0008811,3.20e-07,1;UBERON:0006258,3.20e-07,1;UBERON:0005876,3.20e-07,1;UBERON:0004874,3.20e-07,1;UBERON:0001874,4.06e-07,1;UBERON:0001136,4.57e-07,1;UBERON:0001343,4.57e-07,1;UBERON:0004910,4.57e-07,1;UBERON:0005154,4.57e-07,1;UBERON:0005295,4.57e-07,1;UBERON:0004813,4.57e-07,1;UBERON:0005297,4.57e-07,1;UBERON:0005294,4.57e-07,1;UBERON:0010141,4.57e-07,1;UBERON:0005891,4.57e-07,1;UBERON:0003112,5.14e-07,1;UBERON:0011158,5.14e-07,1;UBERON:0003128,5.14e-07,1;UBERON:0001703,5.14e-07,1;UBERON:0002241,5.14e-07,1;UBERON:0004761,5.14e-07,1;UBERON:0009617,5.14e-07,1;UBERON:0001882,5.78e-07,1;UBERON:0005403,5.78e-07,1;UBERON:0002902,6.49e-07,1;UBERON:0009899,6.49e-07,1 | |||
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| ||
|short_description=p12@SOBP | |||
}} | }} |
Latest revision as of 16:36, 19 September 2015
Short description: | p12@SOBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SOBP_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 429bp_to_NM_018013, uc003prw.1, uc003prx.2_5end |
EntrezGene: | SOBP |
HGNC: | 29256 |
UniProt: | A7XYQ1Q24K27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.57e-07 | 1 |
seminiferous tubule epithelial cell | 4.57e-07 | 1 |
Sertoli cell | 4.57e-07 | 1 |