FFCP PHASE1:Hg19::chr12:58026920..58026993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2583 | |EntrezGene=2583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4117 | |HGNC=4117 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N636,F8VR44,Q00973,Q59FK0 | |UniProt=Q8N636,F8VR44,Q00973,Q59FK0 | ||
|association_with_transcript=0bp_to_ENST00000550764,ENST00000551220,ENST00000553142,NM_001478,uc001spg.1,uc001spi.2,uc010srv.1_5end | |association_with_transcript=0bp_to_ENST00000550764,ENST00000551220,ENST00000553142,NM_001478,uc001spg.1,uc001spi.2,uc010srv.1_5end | ||
|cluster_id=chr12:58026920..58026993,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_B4GALNT1_5end | |description=CAGE_peak_1_at_B4GALNT1_5end | ||
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|ontology_enrichment_celltype=CL:0002319!5.00e-08!25 | |ontology_enrichment_celltype=CL:0002319!5.00e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.87e-08;25 | |ontology_enrichment_celltype_v019=CL:0002319;1.87e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.66e-08,25;CL:0000333,6.01e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.01e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.01e-09;82 | ||
|ontology_enrichment_disease=DOID:14566!2.32e-18!239;DOID:162!3.14e-17!235;DOID:0050687!3.93e-15!143;DOID:305!3.53e-09!106;DOID:1115!4.45e-07!20 | |ontology_enrichment_disease=DOID:14566!2.32e-18!239;DOID:162!3.14e-17!235;DOID:0050687!3.93e-15!143;DOID:305!3.53e-09!106;DOID:1115!4.45e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:1115;1.54e-07;20 | |ontology_enrichment_disease_v019=DOID:1115;1.54e-07;20 | ||
|ontology_enrichment_disease_v019_2=DOID:14566,8.38e-18,239;DOID:162,1.23e-16,235;DOID:0050687,6.10e-14,143;DOID:305,1.18e-08,106;DOID:1115,1.73e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.68e-30!94;UBERON:0001016!4.68e-30!94;UBERON:0001017!7.50e-30!82;UBERON:0005743!9.24e-28!86;UBERON:0000955!7.20e-26!69;UBERON:0006238!7.20e-26!69;UBERON:0001049!3.47e-25!57;UBERON:0005068!3.47e-25!57;UBERON:0006241!3.47e-25!57;UBERON:0007135!3.47e-25!57;UBERON:0002616!3.96e-21!59;UBERON:0004121!3.94e-20!169;UBERON:0002780!4.21e-20!41;UBERON:0001890!4.21e-20!41;UBERON:0006240!4.21e-20!41;UBERON:0003075!6.89e-20!86;UBERON:0007284!6.89e-20!86;UBERON:0003080!7.40e-20!42;UBERON:0002020!1.19e-19!34;UBERON:0003528!1.19e-19!34;UBERON:0000924!1.46e-19!173;UBERON:0006601!1.46e-19!173;UBERON:0001869!1.50e-19!32;UBERON:0001893!1.95e-19!34;UBERON:0002346!7.46e-19!90;UBERON:0002791!8.96e-19!33;UBERON:0000956!6.89e-16!25;UBERON:0000203!6.89e-16!25;UBERON:0002619!1.59e-15!22;UBERON:0000033!8.37e-15!123;UBERON:0000475!1.09e-14!365;UBERON:0001950!2.73e-14!20;UBERON:0000153!9.30e-14!129;UBERON:0007811!9.30e-14!129;UBERON:0000025!3.52e-13!194;UBERON:0003056!7.22e-13!61;UBERON:0007023!1.65e-12!115;UBERON:0004111!6.73e-11!241;UBERON:0000481!2.48e-10!347;UBERON:0000483!5.36e-10!309;UBERON:0000119!8.39e-10!312;UBERON:0000477!4.13e-08!286;UBERON:0000064!1.25e-07!219 | |ontology_enrichment_uberon=UBERON:0000073!4.68e-30!94;UBERON:0001016!4.68e-30!94;UBERON:0001017!7.50e-30!82;UBERON:0005743!9.24e-28!86;UBERON:0000955!7.20e-26!69;UBERON:0006238!7.20e-26!69;UBERON:0001049!3.47e-25!57;UBERON:0005068!3.47e-25!57;UBERON:0006241!3.47e-25!57;UBERON:0007135!3.47e-25!57;UBERON:0002616!3.96e-21!59;UBERON:0004121!3.94e-20!169;UBERON:0002780!4.21e-20!41;UBERON:0001890!4.21e-20!41;UBERON:0006240!4.21e-20!41;UBERON:0003075!6.89e-20!86;UBERON:0007284!6.89e-20!86;UBERON:0003080!7.40e-20!42;UBERON:0002020!1.19e-19!34;UBERON:0003528!1.19e-19!34;UBERON:0000924!1.46e-19!173;UBERON:0006601!1.46e-19!173;UBERON:0001869!1.50e-19!32;UBERON:0001893!1.95e-19!34;UBERON:0002346!7.46e-19!90;UBERON:0002791!8.96e-19!33;UBERON:0000956!6.89e-16!25;UBERON:0000203!6.89e-16!25;UBERON:0002619!1.59e-15!22;UBERON:0000033!8.37e-15!123;UBERON:0000475!1.09e-14!365;UBERON:0001950!2.73e-14!20;UBERON:0000153!9.30e-14!129;UBERON:0007811!9.30e-14!129;UBERON:0000025!3.52e-13!194;UBERON:0003056!7.22e-13!61;UBERON:0007023!1.65e-12!115;UBERON:0004111!6.73e-11!241;UBERON:0000481!2.48e-10!347;UBERON:0000483!5.36e-10!309;UBERON:0000119!8.39e-10!312;UBERON:0000477!4.13e-08!286;UBERON:0000064!1.25e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.74e-19;32!UBERON:0003528;1.93e-18;34!UBERON:0002020;1.93e-18;34!UBERON:0002791;2.76e-18;32!UBERON:0001893;3.41e-18;34!UBERON:0000956;5.21e-17;25!UBERON:0000203;5.21e-17;25!UBERON:0002619;1.42e-16;22!UBERON:0002780;1.24e-15;41!UBERON:0001890;1.24e-15;41!UBERON:0001950;3.04e-15;20!UBERON:0000073;3.88e-15;53!UBERON:0002616;3.88e-15;53!UBERON:0000955;7.41e-13;68!UBERON:0001017;1.17e-12;75!UBERON:0001016;1.49e-12;83 | |ontology_enrichment_uberon_v019=UBERON:0001869;5.74e-19;32!UBERON:0003528;1.93e-18;34!UBERON:0002020;1.93e-18;34!UBERON:0002791;2.76e-18;32!UBERON:0001893;3.41e-18;34!UBERON:0000956;5.21e-17;25!UBERON:0000203;5.21e-17;25!UBERON:0002619;1.42e-16;22!UBERON:0002780;1.24e-15;41!UBERON:0001890;1.24e-15;41!UBERON:0001950;3.04e-15;20!UBERON:0000073;3.88e-15;53!UBERON:0002616;3.88e-15;53!UBERON:0000955;7.41e-13;68!UBERON:0001017;1.17e-12;75!UBERON:0001016;1.49e-12;83 | ||
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| ||
|short_description=p1@B4GALNT1 | |short_description=p1@B4GALNT1 | ||
}} | }} |
Latest revision as of 15:45, 19 September 2015
Short description: | p1@B4GALNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B4GALNT1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000550764, ENST00000551220, ENST00000553142, NM_001478, uc001spg.1, uc001spi.2, uc010srv.1_5end |
EntrezGene: | B4GALNT1 |
HGNC: | 4117 |
UniProt: | Q8N636F8VR44Q00973Q59FK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.66e-08 | 25 |
migratory neural crest cell | 6.01e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 8.38e-18 | 239 |
cancer | 1.23e-16 | 235 |
cell type cancer | 6.10e-14 | 143 |
carcinoma | 1.18e-08 | 106 |
sarcoma | 1.73e-07 | 20 |