FFCP PHASE1:Hg19::chr14:27066907..27066914,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:27066907..27066914,- to FFCP PHASE1:Hg19::chr14:27066907..27066914,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4857 | |EntrezGene=4857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7886 | |HGNC=7886 | ||
|TSSclassifier=strong | |||
|UniProt=P51513,D3DS81 | |UniProt=P51513,D3DS81 | ||
|association_with_transcript=45bp_to_ENST00000539517,NM_002515,NM_006489,NM_006491,uc001wpy.2,uc001wpz.2,uc001wqa.2,uc001wqb.2_5end | |||
|cluster_id=chr14:27066907..27066914,- | |||
|coexpression_cluster_id=C2291 | |||
|description=CAGE_peak_18_at_NOVA1_5end | |||
|id=chr14:27066907..27066914,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.05e-19;2!CL:0002591;9.96e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.46e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.16e-14;3!UBERON:0003057;8.16e-14;3!UBERON:0006215;8.99e-14;3!UBERON:0005425;9.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.83e-61!57;UBERON:0005068!1.83e-61!57;UBERON:0006241!1.83e-61!57;UBERON:0007135!1.83e-61!57;UBERON:0001017!7.95e-59!82;UBERON:0005743!1.54e-57!86;UBERON:0000073!8.61e-55!94;UBERON:0001016!8.61e-55!94;UBERON:0003075!1.94e-51!86;UBERON:0007284!1.94e-51!86;UBERON:0002616!3.12e-50!59;UBERON:0000955!9.04e-49!69;UBERON:0006238!9.04e-49!69;UBERON:0002346!2.13e-48!90;UBERON:0003080!4.39e-45!42;UBERON:0002780!1.85e-43!41;UBERON:0001890!1.85e-43!41;UBERON:0006240!1.85e-43!41;UBERON:0007023!4.22e-43!115;UBERON:0002020!3.86e-42!34;UBERON:0003528!3.86e-42!34;UBERON:0001893!1.12e-41!34;UBERON:0002791!4.33e-40!33;UBERON:0001869!1.12e-38!32;UBERON:0004121!1.06e-35!169;UBERON:0000153!8.43e-35!129;UBERON:0007811!8.43e-35!129;UBERON:0000924!2.05e-34!173;UBERON:0006601!2.05e-34!173;UBERON:0000033!2.34e-34!123;UBERON:0003056!1.70e-33!61;UBERON:0002619!4.30e-33!22;UBERON:0000956!4.64e-31!25;UBERON:0000203!4.64e-31!25;UBERON:0001950!9.90e-30!20;UBERON:0003076!8.06e-17!15;UBERON:0003057!8.06e-17!15;UBERON:0000025!3.83e-15!194;UBERON:0002298!1.66e-14!8;UBERON:0000475!8.00e-14!365;UBERON:0004732!1.46e-13!13;UBERON:0002308!2.28e-12!9;UBERON:0000125!2.28e-12!9;UBERON:0002420!3.92e-12!9;UBERON:0007245!3.92e-12!9;UBERON:0010009!3.92e-12!9;UBERON:0010011!3.92e-12!9;UBERON:0000454!3.92e-12!9;UBERON:0000483!6.06e-12!309;UBERON:0004733!6.75e-12!12;UBERON:0002028!6.75e-12!12;UBERON:0007277!6.75e-12!12;UBERON:0000200!7.19e-12!6;UBERON:0000119!1.18e-11!312;UBERON:0001871!1.24e-11!7;UBERON:0004111!5.29e-11!241;UBERON:0000477!1.44e-10!286;UBERON:0002021!4.52e-10!5;UBERON:0000481!6.80e-10!347;UBERON:0000349!1.26e-09!5;UBERON:0000064!1.30e-09!219;UBERON:0005174!1.87e-09!5;UBERON:0001137!1.87e-09!5;UBERON:0009663!5.62e-09!7;UBERON:0000922!5.67e-09!612;UBERON:0000923!5.51e-08!604;UBERON:0005291!5.51e-08!604;UBERON:0006598!5.51e-08!604;UBERON:0002532!5.51e-08!604;UBERON:0002050!6.26e-08!605;UBERON:0005423!6.26e-08!605;UBERON:0000369!9.33e-08!4;UBERON:0002435!9.33e-08!4;UBERON:0000204!9.33e-08!4;UBERON:0010082!9.33e-08!4;UBERON:0002680!1.35e-07!9;UBERON:0001895!1.35e-07!9;UBERON:0010092!1.35e-07!9;UBERON:0000468!1.92e-07!659;UBERON:0000062!3.24e-07!511;UBERON:0002771!4.79e-07!3;UBERON:0002240!5.93e-07!3;UBERON:0001872!9.38e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.04e-21;20!UBERON:0002771;4.66e-20;2!UBERON:0002619;9.14e-20;22!UBERON:0004732;2.37e-18;13!UBERON:0002021;5.11e-18;5!UBERON:0000956;2.08e-17;25!UBERON:0000203;2.08e-17;25!UBERON:0002240;8.16e-14;3!UBERON:0005174;8.16e-14;3!UBERON:0001137;8.16e-14;3!UBERON:0003528;2.13e-13;34!UBERON:0002020;2.13e-13;34!UBERON:0004733;4.10e-13;12!UBERON:0002028;4.10e-13;12!UBERON:0001016;1.80e-12;83!UBERON:0001017;2.55e-12;75!UBERON:0002791;5.69e-12;32!UBERON:0001869;6.63e-12;32!UBERON:0003112;9.96e-11;1!UBERON:0000941;9.96e-11;1!UBERON:0001785;9.96e-11;1!UBERON:0002464;9.96e-11;1!UBERON:0004904;9.96e-11;1!UBERON:0011158;9.96e-11;1!UBERON:0001021;9.96e-11;1!UBERON:0003128;9.96e-11;1!UBERON:0001703;9.96e-11;1!UBERON:0002241;9.96e-11;1!UBERON:0001893;1.36e-10;34!UBERON:0000073;1.46e-10;53!UBERON:0002616;1.46e-10;53!UBERON:0002680;3.20e-10;9!UBERON:0001895;3.20e-10;9!UBERON:0001872;1.20e-08;5!UBERON:0002780;6.03e-08;41!UBERON:0001890;6.03e-08;41!UBERON:0000955;1.10e-07;68!UBERON:0002298;2.09e-07;6!UBERON:0002037;2.53e-07;6!UBERON:0000200;2.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,5.89e-27,82;UBERON:0007284,5.89e-27,82;UBERON:0001049,1.86e-26,56;UBERON:0005068,1.86e-26,56;UBERON:0006241,1.86e-26,56;UBERON:0007135,1.86e-26,56;UBERON:0002346,1.32e-25,86;UBERON:0001016,3.64e-24,89;UBERON:0001017,1.26e-23,81;UBERON:0003076,7.12e-23,15;UBERON:0003057,7.12e-23,15;UBERON:0001950,1.13e-21,20;UBERON:0010371,8.62e-21,104;UBERON:0002771,3.67e-20,2;UBERON:0000073,7.39e-20,53;UBERON:0002616,7.39e-20,53;UBERON:0002619,9.83e-20,22;UBERON:0004732,1.78e-18,13;UBERON:0010314,4.17e-18,132;UBERON:0002021,4.98e-18,5;UBERON:0000956,2.21e-17,25;UBERON:0000203,2.21e-17,25;UBERON:0003528,1.36e-16,34;UBERON:0002020,1.36e-16,34;UBERON:0004121,4.71e-15,171;UBERON:0000924,4.71e-15,171;UBERON:0006601,4.71e-15,171;UBERON:0000955,6.14e-15,68;UBERON:0006238,6.14e-15,68;UBERON:0002240,5.73e-14,3;UBERON:0005174,5.73e-14,3;UBERON:0001137,5.73e-14,3;UBERON:0002791,1.50e-13,32;UBERON:0001869,1.50e-13,32;UBERON:0004733,3.51e-13,12;UBERON:0002028,3.51e-13,12;UBERON:0007277,3.51e-13,12;UBERON:0001893,9.78e-13,34;UBERON:0011216,2.28e-12,223;UBERON:0003056,3.20e-11,61;UBERON:0000941,7.46e-11,1;UBERON:0001785,7.46e-11,1;UBERON:0002464,7.46e-11,1;UBERON:0004904,7.46e-11,1;UBERON:0001021,7.46e-11,1;UBERON:0003902,7.46e-11,1;UBERON:0005425,7.46e-11,1;UBERON:0003112,1.33e-10,1;UBERON:0011158,1.33e-10,1;UBERON:0003128,1.33e-10,1;UBERON:0001703,1.33e-10,1;UBERON:0002241,1.33e-10,1;UBERON:0004761,1.33e-10,1;UBERON:0009617,1.33e-10,1;UBERON:0002780,1.71e-10,41;UBERON:0001890,1.71e-10,41;UBERON:0003080,1.71e-10,41;UBERON:0006240,1.71e-10,41;UBERON:0002680,2.70e-10,9;UBERON:0001895,2.70e-10,9;UBERON:0010092,2.70e-10,9;UBERON:0007023,3.87e-10,114;UBERON:0001872,1.48e-08,5;UBERON:0000025,1.77e-07,192;UBERON:0002298,2.09e-07,6;UBERON:0002037,2.16e-07,6;UBERON:0006215,2.16e-07,6;UBERON:0000200,2.53e-07,6 | |||
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| ||
|short_description=p18@NOVA1 | |||
}} | }} |
Latest revision as of 15:44, 19 September 2015
Short description: | p18@NOVA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_NOVA1_5end |
Coexpression cluster: | C2291_parietal_Neural_occipital_medial_spinal_locus_temporal |
Association with transcript: | 45bp_to_ENST00000539517, NM_002515, NM_006489, NM_006491, uc001wpy.2, uc001wpz.2, uc001wqa.2, uc001wqb.2_5end |
EntrezGene: | NOVA1 |
HGNC: | 7886 |
UniProt: | P51513D3DS81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.46e-10 | 1 |