FFCP PHASE1:Hg19::chr2:204193101..204193128,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:204193101..204193128,+
|short_description=p2@ABI2
|description=CAGE_peak_2_at_ABI2_5end
|association_with_transcript=0bp_to_ENST00000261016,ENST00000413635...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10152 | |EntrezGene=10152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24011 | |HGNC=24011 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAU3,F8WBL5,Q9NYB9,F8WCD7,E9PEZ7,F8WEB9,E7EUA1 | |UniProt=F8WAU3,F8WBL5,Q9NYB9,F8WCD7,E9PEZ7,F8WEB9,E7EUA1 | ||
|association_with_transcript=0bp_to_ENST00000261016,ENST00000413635,ENST00000416001,ENST00000424558,ENST00000425253,ENST00000430418,ENST00000431886,ENST00000444584_5end | |||
|cluster_id=chr2:204193101..204193128,+ | |||
|coexpression_cluster_id=C2681 | |||
|description=CAGE_peak_2_at_ABI2_5end | |||
|id=chr2:204193101..204193128,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.40e-09!25;CL:0000133!2.33e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.48e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.40e-09,25;CL:0000133,2.33e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.26e-08;82 | |||
|ontology_enrichment_disease=DOID:162!2.18e-10!235;DOID:14566!2.43e-10!239;DOID:0050687!1.15e-09!143;DOID:3095!1.18e-07!22;DOID:2994!1.18e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.71e-08;22!DOID:2994;9.71e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.19e-10,235;DOID:14566,2.43e-10,239;DOID:0050687,1.16e-09,143;DOID:3095,1.18e-07,22;DOID:2994,1.18e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.04e-37!94;UBERON:0001016!9.04e-37!94;UBERON:0005743!1.48e-34!86;UBERON:0001017!5.76e-34!82;UBERON:0002346!2.66e-29!90;UBERON:0000955!2.21e-28!69;UBERON:0006238!2.21e-28!69;UBERON:0003075!9.35e-28!86;UBERON:0007284!9.35e-28!86;UBERON:0001049!1.25e-27!57;UBERON:0005068!1.25e-27!57;UBERON:0006241!1.25e-27!57;UBERON:0007135!1.25e-27!57;UBERON:0002616!1.30e-24!59;UBERON:0000924!1.11e-22!173;UBERON:0006601!1.11e-22!173;UBERON:0003056!2.42e-22!61;UBERON:0002780!7.08e-22!41;UBERON:0001890!7.08e-22!41;UBERON:0006240!7.08e-22!41;UBERON:0004121!2.59e-21!169;UBERON:0003080!4.22e-21!42;UBERON:0001893!4.26e-20!34;UBERON:0002020!4.91e-20!34;UBERON:0003528!4.91e-20!34;UBERON:0001869!1.20e-19!32;UBERON:0002791!1.88e-19!33;UBERON:0000033!3.55e-18!123;UBERON:0000153!2.33e-17!129;UBERON:0007811!2.33e-17!129;UBERON:0000119!2.90e-17!312;UBERON:0000483!1.54e-16!309;UBERON:0000025!3.85e-16!194;UBERON:0000956!4.95e-16!25;UBERON:0000203!4.95e-16!25;UBERON:0002619!1.49e-14!22;UBERON:0000477!5.72e-14!286;UBERON:0000481!1.32e-13!347;UBERON:0001950!2.54e-13!20;UBERON:0000475!2.74e-13!365;UBERON:0004111!2.09e-12!241;UBERON:0000064!8.76e-08!219;UBERON:0003076!1.10e-07!15;UBERON:0003057!1.10e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.96e-18;32!UBERON:0001893;1.32e-17;34!UBERON:0003528;1.63e-17;34!UBERON:0002020;1.63e-17;34!UBERON:0002791;1.94e-17;32!UBERON:0000956;4.99e-16;25!UBERON:0000203;4.99e-16;25!UBERON:0002780;5.65e-16;41!UBERON:0001890;5.65e-16;41!UBERON:0000073;8.52e-16;53!UBERON:0002616;8.52e-16;53!UBERON:0002619;1.52e-14;22!UBERON:0000955;9.29e-14;68!UBERON:0001017;1.79e-13;75!UBERON:0001950;2.58e-13;20!UBERON:0001016;7.97e-13;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.80e-37,89;UBERON:0001017,1.25e-34,81;UBERON:0000955,4.86e-29,68;UBERON:0006238,4.86e-29,68;UBERON:0002346,8.14e-29,86;UBERON:0001049,2.18e-28,56;UBERON:0005068,2.18e-28,56;UBERON:0006241,2.18e-28,56;UBERON:0007135,2.18e-28,56;UBERON:0003075,2.82e-27,82;UBERON:0007284,2.82e-27,82;UBERON:0000073,4.38e-27,53;UBERON:0002616,4.38e-27,53;UBERON:0003056,3.49e-23,61;UBERON:0004121,6.66e-22,171;UBERON:0000924,6.66e-22,171;UBERON:0006601,6.66e-22,171;UBERON:0002780,7.07e-22,41;UBERON:0001890,7.07e-22,41;UBERON:0003080,7.07e-22,41;UBERON:0006240,7.07e-22,41;UBERON:0010314,1.47e-21,132;UBERON:0001893,4.26e-20,34;UBERON:0003528,4.91e-20,34;UBERON:0002020,4.91e-20,34;UBERON:0001869,1.20e-19,32;UBERON:0011216,4.01e-19,223;UBERON:0002791,4.09e-19,32;UBERON:0010371,9.80e-19,104;UBERON:0000119,1.36e-16,309;UBERON:0000025,1.63e-16,192;UBERON:0000956,4.95e-16,25;UBERON:0000203,4.95e-16,25;UBERON:0000483,6.99e-16,306;UBERON:0002619,1.49e-14,22;UBERON:0001950,2.54e-13,20;UBERON:0004111,9.27e-13,240;UBERON:0003076,1.10e-07,15;UBERON:0003057,1.10e-07,15 | |||
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| ||
|short_description=p2@ABI2 | |||
}} | }} |
Latest revision as of 15:31, 19 September 2015
Short description: | p2@ABI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABI2_5end |
Coexpression cluster: | C2681_amygdala_duodenum_insula_rhabdomyosarcoma_medial_frontal_brain |
Association with transcript: | 0bp_to_ENST00000261016, ENST00000413635, ENST00000416001, ENST00000424558, ENST00000425253, ENST00000430418, ENST00000431886, ENST00000444584_5end |
EntrezGene: | ABI2 |
HGNC: | 24011 |
UniProt: | F8WAU3F8WBL5Q9NYB9F8WCD7E9PEZ7F8WEB9E7EUA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.40e-09 | 25 |
neurectodermal cell | 2.33e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.19e-10 | 235 |
disease of cellular proliferation | 2.43e-10 | 239 |
cell type cancer | 1.16e-09 | 143 |
germ cell and embryonal cancer | 1.18e-07 | 22 |
germ cell cancer | 1.18e-07 | 22 |