FFCP PHASE1:Hg19::chr7:77428248..77428259,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:77428248..77428259,+ to FFCP PHASE1:Hg19::chr7:77428248..77428259,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57157 | |EntrezGene=57157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13411 | |HGNC=13411 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000275575_5end | |||
|cluster_id=chr7:77428248..77428259,+ | |||
|description=CAGE_peak_5_at_PHTF2_5end | |||
|id=chr7:77428248..77428259,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002195;2.83e-09;2!CL:0002571;2.83e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,3.68e-09,2;CL:0002571,3.68e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.09e-16!57;UBERON:0005068!6.09e-16!57;UBERON:0006241!6.09e-16!57;UBERON:0007135!6.09e-16!57;UBERON:0002616!1.02e-15!59;UBERON:0002780!1.93e-15!41;UBERON:0001890!1.93e-15!41;UBERON:0006240!1.93e-15!41;UBERON:0000955!2.93e-15!69;UBERON:0006238!2.93e-15!69;UBERON:0003080!1.24e-14!42;UBERON:0000073!2.73e-14!94;UBERON:0001016!2.73e-14!94;UBERON:0005743!2.75e-14!86;UBERON:0001017!3.84e-14!82;UBERON:0002346!6.64e-13!90;UBERON:0003075!7.44e-12!86;UBERON:0007284!7.44e-12!86;UBERON:0001893!1.14e-11!34;UBERON:0002791!3.82e-11!33;UBERON:0003056!4.06e-11!61;UBERON:0001869!8.06e-11!32;UBERON:0007023!1.81e-10!115;UBERON:0002020!1.87e-10!34;UBERON:0003528!1.87e-10!34;UBERON:0000924!7.19e-10!173;UBERON:0006601!7.19e-10!173;UBERON:0000033!1.48e-09!123;UBERON:0004121!4.76e-09!169;UBERON:0000153!5.13e-09!129;UBERON:0007811!5.13e-09!129;UBERON:0002619!2.34e-08!22;UBERON:0000956!1.64e-07!25;UBERON:0000203!1.64e-07!25;UBERON:0001950!3.39e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.50e-10;4!UBERON:0010133;6.50e-10;4!UBERON:0002784;6.50e-10;4!UBERON:0001894;1.16e-09;7!UBERON:0001905;2.83e-09;2!UBERON:0002757;2.83e-09;2!UBERON:0010134;2.83e-09;2!UBERON:0005408;2.83e-09;2!UBERON:0001899;2.83e-09;2!UBERON:0000073;3.77e-09;53!UBERON:0002616;3.77e-09;53!UBERON:0000955;1.81e-08;68!UBERON:0002780;9.98e-08;41!UBERON:0001890;9.98e-08;41!UBERON:0001017;6.72e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,6.79e-15,68;UBERON:0006238,6.79e-15,68;UBERON:0000073,7.55e-14,53;UBERON:0002616,7.55e-14,53;UBERON:0001049,6.09e-13,56;UBERON:0005068,6.09e-13,56;UBERON:0006241,6.09e-13,56;UBERON:0007135,6.09e-13,56;UBERON:0001017,6.59e-12,81;UBERON:0002780,1.20e-11,41;UBERON:0001890,1.20e-11,41;UBERON:0003080,1.20e-11,41;UBERON:0006240,1.20e-11,41;UBERON:0001016,2.42e-10,89;UBERON:0002784,1.21e-09,4;UBERON:0001894,2.13e-09,7;UBERON:0006222,2.13e-09,7;UBERON:0003296,2.42e-09,4;UBERON:0010133,2.42e-09,4;UBERON:0003075,3.94e-09,82;UBERON:0007284,3.94e-09,82;UBERON:0001905,1.30e-08,2;UBERON:0002757,1.30e-08,2;UBERON:0010134,1.30e-08,2;UBERON:0005408,1.30e-08,2;UBERON:0001899,1.30e-08,2;UBERON:0002346,1.49e-08,86;UBERON:0003056,1.75e-08,61;UBERON:0010314,9.57e-08,132;UBERON:0010371,1.45e-07,104;UBERON:0002791,6.70e-07,32;UBERON:0001869,6.70e-07,32 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0,0.223915474239924,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0.891283655081389,0,0.221533894583621,0.812411591295047,0.640456598628376,0.130059347559878,0.493313713811028,1.38175008892924,0.579606171470105,0,0,0,0.793165398882963,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.579386075843295,1.5905718941022,0,0.189069634328136,0.443458794925128,0,0.523916301990851,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.264818361626438,1.72101972449288,0,0.560677600142307,0,0,1.24484414159907,0,0,0,1.15235184896,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0.554128230968366,0,0,0.300476117813194,0.113432183160021,0.89694817844431,0.640672166455702,0.847727604638247,0.600182192168805,0.92747276314595,0,0.18611685633159,1.5189869901714,0.68205903612839,0.504867548488229,0.368199594569197,0.646584227275248,1.06502877754984,0.705264687593482,0.339121184620975,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,2.16563844500876,0,0,0,0.110293972732394,0.435758888184812,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.343135620597051,0.219500570817251,0,0.603173834469785,0.0925884451585296,0,0,0,0.34779121492523,0.469634776943287,0,0.462985512576611,0,0,0,0,0,0.297262324577456,0,0.503946384596579,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0.528290604079356,1.03664057770386,0.432359860250884,0,0.507983154337352,0.381988425558278,1.17217447210047,0,0.308482478109971,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0.646358578788889,0,0,0.26593811658487,0,0,0,0,1.42977993658148,0,0,0,1.06617584622764,0,0,0,0.699810938274399,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0.24538298343828,0,0,1.24782516918484,1.07057393278297,0.630809660135739,0.702848489956279,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.106727557803444,0,1.66435439510497,0.30239029332968,0,0.920771839728375,0.561320188866147,0.896974044789907,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0,0,0.34444334449382,0,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0.256450125116389,0,0.650756789328606,0.515205058238611,0.366277859273374,0.495056999523528,0,0,0,0.290012154876366,0,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.765676274967505,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,1.2655176988749,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0,0,0,0,0.682499557039929,0,0,0,1.32687795048244,0,0,0,0.202910376962704,0,0.281695602532241,1.14729081763241,0.589494246078727,0,0,0.422215270595328,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0,0,0,0.213425530045242,0.159426272728822,0,0,0,0.649243880549111,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0.18714054040822,0,0,0.111443384277478,0,0.95497793895076,0.593929361665277,0,0.994147647766298,0.562677665642051,0.222617410045812,0,1.90012867315194,0.19924798825107,0.552567831062295,0.755798243562828,0.306806047506464,0,0,0.269605053441981,0.358042349351218,0,0.295930216910801,0,0,0,0.556608588971108,0,0.520855522170466,0.262379999988587,0,0.227586896570999,0.254253650292766,0.236387681767936,0.344743373241465,0.291604613383254,0.520874984799877,0.885741385813839,0.844175070377856,1.52581736317083,0.110579259931225,1.47773809476774,0.658156191461918,0.10893846351899,0.278847488557207,0.230850775511391,0.227884111694002,0.69169171316418,0.718061155278177,0.325942115766024,0,0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|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0,0.223915474239924,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0.891283655081389,0,0.221533894583621,0.812411591295047,0.640456598628376,0.130059347559878,0.493313713811028,1.38175008892924,0.579606171470105,0,0,0,0.793165398882963,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.579386075843295,1.5905718941022,0,0.189069634328136,0.443458794925128,0,0.523916301990851,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.264818361626438,1.72101972449288,0,0.560677600142307,0,0,1.24484414159907,0,0,0,1.15235184896,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0.554128230968366,0,0,0.300476117813194,0.113432183160021,0.89694817844431,0.640672166455702,0.847727604638247,0.600182192168805,0.92747276314595,0,0.18611685633159,1.5189869901714,0.68205903612839,0.504867548488229,0.368199594569197,0.646584227275248,1.06502877754984,0.705264687593482,0.339121184620975,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,2.16563844500876,0,0,0,0.110293972732394,0.435758888184812,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.343135620597051,0.219500570817251,0,0.603173834469785,0.0925884451585296,0,0,0,0.34779121492523,0.469634776943287,0,0.462985512576611,0,0,0,0,0,0.297262324577456,0,0.503946384596579,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0.528290604079356,1.03664057770386,0.432359860250884,0,0.507983154337352,0.381988425558278,1.17217447210047,0,0.308482478109971,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0.646358578788889,0,0,0.26593811658487,0,0,0,0,1.42977993658148,0,0,0,1.06617584622764,0,0,0,0.699810938274399,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0.24538298343828,0,0,1.24782516918484,1.07057393278297,0.630809660135739,0.702848489956279,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.106727557803444,0,1.66435439510497,0.30239029332968,0,0.920771839728375,0.561320188866147,0.896974044789907,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0,0,0.34444334449382,0,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0.256450125116389,0,0.650756789328606,0.515205058238611,0.366277859273374,0.495056999523528,0,0,0,0.290012154876366,0,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.765676274967505,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,1.2655176988749,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0,0,0,0,0.682499557039929,0,0,0,1.32687795048244,0,0,0,0.202910376962704,0,0.281695602532241,1.14729081763241,0.589494246078727,0,0,0.422215270595328,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0,0,0,0.213425530045242,0.159426272728822,0,0,0,0.649243880549111,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0.18714054040822,0,0,0.111443384277478,0,0.95497793895076,0.593929361665277,0,0.994147647766298,0.562677665642051,0.222617410045812,0,1.90012867315194,0.19924798825107,0.552567831062295,0.755798243562828,0.306806047506464,0,0,0.269605053441981,0.358042349351218,0,0.295930216910801,0,0,0,0.556608588971108,0,0.520855522170466,0.262379999988587,0,0.227586896570999,0.254253650292766,0.236387681767936,0.344743373241465,0.291604613383254,0.520874984799877,0.885741385813839,0.844175070377856,1.52581736317083,0.110579259931225,1.47773809476774,0.658156191461918,0.10893846351899,0.278847488557207,0.230850775511391,0.227884111694002,0.69169171316418,0.718061155278177,0.325942115766024,0,0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| ||
|short_description=p5@PHTF2 | |||
}} | }} |
Latest revision as of 15:09, 19 September 2015
Short description: | p5@PHTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHTF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000275575_5end |
EntrezGene: | PHTF2 |
HGNC: | 13411 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 3.68e-09 | 2 |
hepatic mesenchymal stem cell | 3.68e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
brain | 6.79e-15 | 68 |
future brain | 6.79e-15 | 68 |
regional part of nervous system | 7.55e-14 | 53 |
regional part of brain | 7.55e-14 | 53 |
neural tube | 6.09e-13 | 56 |
neural rod | 6.09e-13 | 56 |
future spinal cord | 6.09e-13 | 56 |
neural keel | 6.09e-13 | 56 |
central nervous system | 6.59e-12 | 81 |
regional part of forebrain | 1.20e-11 | 41 |
forebrain | 1.20e-11 | 41 |
anterior neural tube | 1.20e-11 | 41 |
future forebrain | 1.20e-11 | 41 |
nervous system | 2.42e-10 | 89 |
regional part of diencephalon | 1.21e-09 | 4 |
diencephalon | 2.13e-09 | 7 |
future diencephalon | 2.13e-09 | 7 |
gland of diencephalon | 2.42e-09 | 4 |
neuroendocrine gland | 2.42e-09 | 4 |
neural plate | 3.94e-09 | 82 |
presumptive neural plate | 3.94e-09 | 82 |
pineal body | 1.30e-08 | 2 |
regional part of epithalamus | 1.30e-08 | 2 |
secretory circumventricular organ | 1.30e-08 | 2 |
circumventricular organ | 1.30e-08 | 2 |
epithalamus | 1.30e-08 | 2 |
neurectoderm | 1.49e-08 | 86 |
pre-chordal neural plate | 1.75e-08 | 61 |
structure with developmental contribution from neural crest | 9.57e-08 | 132 |
ecto-epithelium | 1.45e-07 | 104 |
regional part of telencephalon | 6.70e-07 | 32 |
cerebral hemisphere | 6.70e-07 | 32 |