FFCP PHASE1:Hg19::chr10:82049339..82049366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4143 | |EntrezGene=4143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6903 | |HGNC=6903 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENST00000372206_5end | |association_with_transcript=-46bp_to_ENST00000372206_5end | ||
|cluster_id=chr10:82049339..82049366,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_MAT1A_5end | |description=CAGE_peak_2_at_MAT1A_5end | ||
|id=chr10:82049339..82049366,- | |id=chr10:82049339..82049366,- | ||
|ontology_enrichment_celltype=CL:0000181!2.33e-11!12;CL:0000417!2.33e-11!12;CL:0000668!2.33e-11!12;CL:0000414!2.33e-11!12;CL:0000412!2.33e-11!12;CL:0000182!2.33e-11!12;CL:0002322!2.76e-10!5;CL:0000223!1.24e-09!59 | |ontology_enrichment_celltype=CL:0000181!2.33e-11!12;CL:0000417!2.33e-11!12;CL:0000668!2.33e-11!12;CL:0000414!2.33e-11!12;CL:0000412!2.33e-11!12;CL:0000182!2.33e-11!12;CL:0002322!2.76e-10!5;CL:0000223!1.24e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.80e-33;12!CL:0002563;8.05e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.80e-33,12;CL:0000223,2.24e-12,58;CL:0002563,7.89e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.55e-26;11!UBERON:0009497;3.28e-22;13!UBERON:0003104;3.42e-12;31!UBERON:0001041;2.33e-09;30!CL:0000223;2.72e-08;58 | |||
|ontology_enrichment_disease=DOID:299!5.09e-08!25;DOID:305!3.58e-07!106 | |ontology_enrichment_disease=DOID:299!5.09e-08!25;DOID:305!3.58e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:2355;3.53e-09;1!DOID:178;4.87e-09;1!DOID:326;4.87e-09;1!DOID:3978;4.87e-09;1!DOID:3394;4.87e-09;1!DOID:5844;4.87e-09;1!DOID:1287;1.04e-08;4!DOID:7;9.46e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.02e-09,39;DOID:2355,3.25e-09,1;DOID:178,4.15e-09,1;DOID:326,4.15e-09,1;DOID:3978,4.15e-09,1;DOID:3394,4.15e-09,1;DOID:5844,4.15e-09,1;DOID:1287,9.25e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000949!4.36e-14!45;UBERON:0002368!9.00e-14!35;UBERON:0005057!1.82e-11!26;UBERON:0007023!2.16e-11!115;UBERON:0007499!1.44e-10!25;UBERON:0002530!1.76e-10!59;UBERON:0002107!1.77e-10!19;UBERON:0006925!1.77e-10!19;UBERON:0008836!1.77e-10!19;UBERON:0009497!2.03e-10!25;UBERON:0000015!2.03e-10!25;UBERON:0002423!2.03e-10!25;UBERON:0006235!2.03e-10!25;UBERON:0004161!2.03e-10!25;UBERON:0008835!2.22e-10!22;UBERON:0003894!2.22e-10!22;UBERON:0009856!4.82e-10!26;UBERON:0009854!8.29e-10!23;UBERON:0005172!1.91e-09!55;UBERON:0005173!1.91e-09!55;UBERON:0003929!2.22e-08!54;UBERON:0005177!3.96e-08!107;UBERON:0002417!4.94e-08!61;UBERON:0000916!4.94e-08!61;UBERON:0002365!5.47e-08!31;UBERON:0002330!5.47e-08!31;UBERON:0001041!1.34e-07!98;UBERON:0004921!3.13e-07!129;UBERON:0004185!3.13e-07!129 | |ontology_enrichment_uberon=UBERON:0000949!4.36e-14!45;UBERON:0002368!9.00e-14!35;UBERON:0005057!1.82e-11!26;UBERON:0007023!2.16e-11!115;UBERON:0007499!1.44e-10!25;UBERON:0002530!1.76e-10!59;UBERON:0002107!1.77e-10!19;UBERON:0006925!1.77e-10!19;UBERON:0008836!1.77e-10!19;UBERON:0009497!2.03e-10!25;UBERON:0000015!2.03e-10!25;UBERON:0002423!2.03e-10!25;UBERON:0006235!2.03e-10!25;UBERON:0004161!2.03e-10!25;UBERON:0008835!2.22e-10!22;UBERON:0003894!2.22e-10!22;UBERON:0009856!4.82e-10!26;UBERON:0009854!8.29e-10!23;UBERON:0005172!1.91e-09!55;UBERON:0005173!1.91e-09!55;UBERON:0003929!2.22e-08!54;UBERON:0005177!3.96e-08!107;UBERON:0002417!4.94e-08!61;UBERON:0000916!4.94e-08!61;UBERON:0002365!5.47e-08!31;UBERON:0002330!5.47e-08!31;UBERON:0001041!1.34e-07!98;UBERON:0004921!3.13e-07!129;UBERON:0004185!3.13e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.80e-34;19!UBERON:0006925;8.80e-34;19!UBERON:0002423;2.29e-25;25!UBERON:0002368;5.46e-21;33!UBERON:0002365;1.30e-19;31!UBERON:0002330;1.30e-19;31!UBERON:0000949;3.11e-17;43!UBERON:0006947;1.73e-11;3!UBERON:0004054;1.73e-11;3!UBERON:0001301;1.91e-09;1!UBERON:0002530;3.97e-09;57!UBERON:0001000;4.87e-09;1!UBERON:0005352;4.87e-09;1!UBERON:0005904;7.74e-09;4!UBERON:0001242;8.05e-09;4!UBERON:0001262;8.05e-09;4!UBERON:0004786;8.05e-09;4!UBERON:0004808;8.05e-09;4!UBERON:0001277;8.05e-09;4!UBERON:0005172;1.35e-07;52!UBERON:0005173;1.35e-07;52!UBERON:0002417;4.32e-07;58!UBERON:0000916;4.32e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.80e-34,19;UBERON:0006925,8.80e-34,19;UBERON:0008836,8.80e-34,19;UBERON:0008835,5.30e-29,22;UBERON:0003894,5.30e-29,22;UBERON:0009854,1.10e-27,23;UBERON:0007499,2.29e-25,25;UBERON:0009497,2.29e-25,25;UBERON:0000015,2.29e-25,25;UBERON:0002423,2.29e-25,25;UBERON:0006235,2.29e-25,25;UBERON:0004161,2.29e-25,25;UBERON:0009856,2.43e-24,26;UBERON:0002368,8.71e-22,35;UBERON:0002365,3.34e-20,31;UBERON:0002330,3.34e-20,31;UBERON:0000949,4.06e-20,45;UBERON:0003929,1.34e-19,54;UBERON:0002530,7.41e-15,59;UBERON:0005172,1.26e-13,54;UBERON:0005173,1.26e-13,54;UBERON:0005911,3.40e-12,82;UBERON:0002417,4.21e-12,60;UBERON:0000916,4.21e-12,60;UBERON:0006947,1.77e-11,3;UBERON:0004054,1.77e-11,3;UBERON:0001301,1.84e-09,1;UBERON:0001000,5.28e-09,1;UBERON:0005352,5.28e-09,1;UBERON:0001242,7.89e-09,4;UBERON:0005904,7.89e-09,4;UBERON:0001262,7.89e-09,4;UBERON:0004786,7.89e-09,4;UBERON:0004808,7.89e-09,4;UBERON:0001277,7.89e-09,4;UBERON:0005177,5.66e-08,101;UBERON:0004921,9.35e-08,118;UBERON:0009569,5.63e-07,112 | |||
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|short_description=p2@MAT1A | |short_description=p2@MAT1A | ||
}} | }} |
Latest revision as of 15:08, 19 September 2015
Short description: | p2@MAT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAT1A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -46bp_to_ENST00000372206_5end |
EntrezGene: | MAT1A |
HGNC: | 6903 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.80e-33 | 12 |
endodermal cell | 2.24e-12 | 58 |
intestinal epithelial cell | 7.89e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.02e-09 | 39 |
anemia | 3.25e-09 | 1 |
vascular disease | 4.15e-09 | 1 |
ischemia | 4.15e-09 | 1 |
extrinsic cardiomyopathy | 4.15e-09 | 1 |
myocardial ischemia | 4.15e-09 | 1 |
myocardial infarction | 4.15e-09 | 1 |
cardiovascular system disease | 9.25e-09 | 4 |