FFCP PHASE1:Hg19::chr2:203776609..203776642,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55759 | |EntrezGene=55759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14098 | |HGNC=14098 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZL7,Q53T99 | |UniProt=Q9GZL7,Q53T99 | ||
|association_with_transcript=306bp_to_ENST00000261015,NM_018256,uc002uzl.2,uc010ftt.2_5end | |association_with_transcript=306bp_to_ENST00000261015,NM_018256,uc002uzl.2,uc010ftt.2_5end | ||
|cluster_id=chr2:203776609..203776642,- | |||
|description=CAGE_peak_3_at_WDR12_5end | |description=CAGE_peak_3_at_WDR12_5end | ||
|id=chr2:203776609..203776642,- | |id=chr2:203776609..203776642,- | ||
|ontology_enrichment_celltype=CL:0000066!5.41e-08!254 | |ontology_enrichment_celltype=CL:0000066!5.41e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.46e-22!239;DOID:162!9.24e-22!235;DOID:0050687!3.19e-19!143;DOID:305!1.69e-13!106;DOID:0050686!3.56e-08!137;DOID:3095!2.58e-07!22;DOID:2994!2.58e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.16e-19,239;DOID:162,2.10e-19,235;DOID:0050687,2.15e-18,143;DOID:305,6.37e-13,106;DOID:3095,2.44e-07,22;DOID:2994,2.44e-07,22;DOID:0050686,9.24e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.63e-11!94;UBERON:0001016!1.63e-11!94;UBERON:0005743!1.78e-10!86;UBERON:0001017!4.41e-10!82;UBERON:0000955!6.63e-09!69;UBERON:0006238!6.63e-09!69;UBERON:0002020!9.57e-09!34;UBERON:0003528!9.57e-09!34;UBERON:0001869!1.56e-08!32;UBERON:0001893!1.68e-08!34;UBERON:0000924!1.75e-08!173;UBERON:0006601!1.75e-08!173;UBERON:0002780!2.06e-08!41;UBERON:0001890!2.06e-08!41;UBERON:0006240!2.06e-08!41;UBERON:0002791!3.43e-08!33;UBERON:0002616!3.73e-08!59;UBERON:0003080!5.14e-08!42;UBERON:0000033!9.02e-08!123;UBERON:0004121!1.05e-07!169;UBERON:0000956!1.51e-07!25;UBERON:0000203!1.51e-07!25;UBERON:0002619!2.57e-07!22;UBERON:0000475!2.69e-07!365;UBERON:0001049!2.85e-07!57;UBERON:0005068!2.85e-07!57;UBERON:0006241!2.85e-07!57;UBERON:0007135!2.85e-07!57;UBERON:0003056!3.04e-07!61;UBERON:0000153!4.79e-07!129;UBERON:0007811!4.79e-07!129;UBERON:0001950!9.39e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.54e-08;34!UBERON:0002020;2.54e-08;34!UBERON:0001893;2.82e-08;34!UBERON:0002791;3.69e-08;32!UBERON:0001869;3.70e-08;32!UBERON:0000956;5.23e-08;25!UBERON:0000203;5.23e-08;25!UBERON:0002619;2.11e-07;22!UBERON:0002780;5.47e-07;41!UBERON:0001890;5.47e-07;41!UBERON:0001950;7.32e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.63e-11,89;UBERON:0001017,5.10e-10,81;UBERON:0003528,4.16e-09,34;UBERON:0002020,4.16e-09,34;UBERON:0001869,7.02e-09,32;UBERON:0001893,7.54e-09,34;UBERON:0000955,7.80e-09,68;UBERON:0006238,7.80e-09,68;UBERON:0002791,8.79e-09,32;UBERON:0002780,1.15e-08,41;UBERON:0001890,1.15e-08,41;UBERON:0003080,1.15e-08,41;UBERON:0006240,1.15e-08,41;UBERON:0000073,1.16e-08,53;UBERON:0002616,1.16e-08,53;UBERON:0000956,6.20e-08,25;UBERON:0000203,6.20e-08,25;UBERON:0004121,9.23e-08,171;UBERON:0000924,9.23e-08,171;UBERON:0006601,9.23e-08,171;UBERON:0001049,1.07e-07,56;UBERON:0005068,1.07e-07,56;UBERON:0006241,1.07e-07,56;UBERON:0007135,1.07e-07,56;UBERON:0002619,1.09e-07,22;UBERON:0003056,2.59e-07,61;UBERON:0001950,4.33e-07,20;UBERON:0002346,7.38e-07,86 | |||
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| ||
|short_description=p3@WDR12 | |short_description=p3@WDR12 | ||
}} | }} |
Latest revision as of 14:57, 19 September 2015
Short description: | p3@WDR12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WDR12_5end |
Coexpression cluster: | NA |
Association with transcript: | 306bp_to_ENST00000261015, NM_018256, uc002uzl.2, uc010ftt.2_5end |
EntrezGene: | WDR12 |
HGNC: | 14098 |
UniProt: | Q9GZL7Q53T99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.63e-11 | 89 |
central nervous system | 5.10e-10 | 81 |
brain grey matter | 4.16e-09 | 34 |
gray matter | 4.16e-09 | 34 |
cerebral hemisphere | 7.02e-09 | 32 |
telencephalon | 7.54e-09 | 34 |
brain | 7.80e-09 | 68 |
future brain | 7.80e-09 | 68 |
regional part of telencephalon | 8.79e-09 | 32 |
regional part of forebrain | 1.15e-08 | 41 |
forebrain | 1.15e-08 | 41 |
anterior neural tube | 1.15e-08 | 41 |
future forebrain | 1.15e-08 | 41 |
regional part of nervous system | 1.16e-08 | 53 |
regional part of brain | 1.16e-08 | 53 |
cerebral cortex | 6.20e-08 | 25 |
pallium | 6.20e-08 | 25 |
ectoderm-derived structure | 9.23e-08 | 171 |
ectoderm | 9.23e-08 | 171 |
presumptive ectoderm | 9.23e-08 | 171 |
neural tube | 1.07e-07 | 56 |
neural rod | 1.07e-07 | 56 |
future spinal cord | 1.07e-07 | 56 |
neural keel | 1.07e-07 | 56 |
regional part of cerebral cortex | 1.09e-07 | 22 |
pre-chordal neural plate | 2.59e-07 | 61 |
neocortex | 4.33e-07 | 20 |
neurectoderm | 7.38e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.16e-19 | 239 |
cancer | 2.10e-19 | 235 |
cell type cancer | 2.15e-18 | 143 |
carcinoma | 6.37e-13 | 106 |
germ cell and embryonal cancer | 2.44e-07 | 22 |
germ cell cancer | 2.44e-07 | 22 |
organ system cancer | 9.24e-07 | 137 |